>ref|XM_463975.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2712

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 367 tccgacatcgccgtatccttccgcgactggttcctc 402
           |||| ||||||||  |||||||||||||||||||||
Sbjct: 175 tccgccatcgccgactccttccgcgactggttcctc 210



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 223 attctgtcgaacaccttctcggcgtccacc 252
           ||||| |||||||||||||| |||||||||
Sbjct: 61  attctctcgaacaccttctccgcgtccacc 90

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                   
Query: 367     tccgacatcgccgtatccttccgcgactggttcctc 402
               |||| ||||||||  |||||||||||||||||||||
Sbjct: 1433484 tccgccatcgccgactccttccgcgactggttcctc 1433519



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 223     attctgtcgaacaccttctcggcgtccacc 252
               ||||| |||||||||||||| |||||||||
Sbjct: 1433370 attctctcgaacaccttctccgcgtccacc 1433399

>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0482F12
          Length = 147735

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 367    tccgacatcgccgtatccttccgcgactggttcctc 402
              |||| ||||||||  |||||||||||||||||||||
Sbjct: 114756 tccgccatcgccgactccttccgcgactggttcctc 114791



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 223    attctgtcgaacaccttctcggcgtccacc 252
              ||||| |||||||||||||| |||||||||
Sbjct: 114642 attctctcgaacaccttctccgcgtccacc 114671

>ref|NM_192566.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1620

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 228 gtcgaacaccttctcggcgtc 248
           |||||||||||||||||||||
Sbjct: 651 gtcgaacaccttctcggcgtc 631

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 228      gtcgaacaccttctcggcgtc 248
                |||||||||||||||||||||
Sbjct: 22989632 gtcgaacaccttctcggcgtc 22989652

>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415C01
          Length = 138701

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   gtcgaacaccttctcggcgtc 248
             |||||||||||||||||||||
Sbjct: 60038 gtcgaacaccttctcggcgtc 60058

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    cgcttccccccgcgccgccg 421
              ||||||||||||||||||||
Sbjct: 419708 cgcttccccccgcgccgccg 419689

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 360     cgccgcgtccgacatcgccg 379
               ||||||||||||||||||||
Sbjct: 2022881 cgccgcgtccgacatcgccg 2022862


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,164,379
Number of Sequences: 3902068
Number of extensions: 1164379
Number of successful extensions: 17820
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17732
Number of HSP's gapped (non-prelim): 88
length of query: 422
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 400
effective length of database: 17,147,199,772
effective search space: 6858879908800
effective search space used: 6858879908800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)