ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017414.1| Zea mays clone EL01N0331F10.c mRNA sequence 44 0.37
2emb|AL356430.19| Human DNA sequence from clone RP11-467B13 on ch... 44 0.37
3ref|NM_188290.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
4gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
5gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
7emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.5
8emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 42 1.5
9gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
13emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 42 1.5
14dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
16ref|XM_482025.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
17ref|XM_473980.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
18ref|XM_466699.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
19gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 5.8
20ref|NM_185924.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
21ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
22gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
23gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
24gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
25gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.8
26ref|XM_384245.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 5.8
27emb|AL359699.12| Human DNA sequence from clone RP11-130F5 on chr... 40 5.8
28emb|CR388002.6| Zebrafish DNA sequence from clone DKEY-75M8 in l... 40 5.8
29emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4,... 40 5.8
30emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in... 40 5.8
31gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosom... 40 5.8
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
35dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
38dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
39dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
40dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
41dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
42emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 ... 40 5.8
43dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
44dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
45dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
46dbj|AK111216.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
47dbj|AK071478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
48dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
49dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
50gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.8
51emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 40 5.8
52emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chro... 40 5.8
53gb|AY048670.1| Streptomyces globisporus enediyne antitumor antib... 40 5.8 
>gb|BT017414.1| Zea mays clone EL01N0331F10.c mRNA sequence
          Length = 1298

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 255 cggccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||||
Sbjct: 788 cggccgtcgccgtcggcggcgg 809
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>emb|AL356430.19| Human DNA sequence from clone RP11-467B13 on chromosome 13 Contains
             part of the NBEA gene for neurobeachin (BCL8B FLJ10197
             KIAA1544) and a pseudogene similar to part og a noveln
             proteon (KIAA1925), complete sequence
          Length = 170885

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    cccatctcaaaaagttgagcct 45
             ||||||||||||||||||||||
Sbjct: 76089 cccatctcaaaaagttgagcct 76110
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>ref|NM_188290.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 ggccgtcgccgtcggcggcgg 276
           |||||||||||||||||||||
Sbjct: 125 ggccgtcgccgtcggcggcgg 145
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>gb|AC120536.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035N09,
              complete sequence
          Length = 129468

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 196    cgagcgagcgagcacgcgcgc 216
              |||||||||||||||||||||
Sbjct: 116193 cgagcgagcgagcacgcgcgc 116213
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>gb|AC128642.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1115_A03
             map S20262S, complete sequence
          Length = 149553

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   cgagcgagcgagcacgcgcgc 216
             |||||||||||||||||||||
Sbjct: 13735 cgagcgagcgagcacgcgcgc 13755
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 255     cggccgtcgccgtcggcggcggatc 279
               ||||||||| |||||||||||||||
Sbjct: 7675960 cggccgtcgtcgtcggcggcggatc 7675936
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>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16
          Length = 346879

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 139    gggcgggcaagcgcaaattcc 159
              |||||||||||||||||||||
Sbjct: 136753 gggcgggcaagcgcaaattcc 136733
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>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    cgagcgagcgagcacgcgcgc 216
              |||||||||||||||||||||
Sbjct: 132543 cgagcgagcgagcacgcgcgc 132523
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 255   cggccgtcgccgtcggcggcggatc 279
             ||||||||| |||||||||||||||
Sbjct: 39330 cggccgtcgtcgtcggcggcggatc 39354
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 196      cgagcgagcgagcacgcgcgc 216
                |||||||||||||||||||||
Sbjct: 13297382 cgagcgagcgagcacgcgcgc 13297402



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 196      cgagcgagcgagcacgcgcg 215
                ||||||||||||||||||||
Sbjct: 10896134 cgagcgagcgagcacgcgcg 10896115
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 255     cggccgtcgccgtcggcggcggatc 279
               ||||||||| |||||||||||||||
Sbjct: 7673795 cggccgtcgtcgtcggcggcggatc 7673771
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 256     ggccgtcgccgtcggcggcgg 276
               |||||||||||||||||||||
Sbjct: 5506756 ggccgtcgccgtcggcggcgg 5506776
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>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 196   cgagcgagcgagcacgcgcgc 216
             |||||||||||||||||||||
Sbjct: 38160 cgagcgagcgagcacgcgcgc 38140
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1015E06
          Length = 164583

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 256    ggccgtcgccgtcggcggcgg 276
              |||||||||||||||||||||
Sbjct: 103596 ggccgtcgccgtcggcggcgg 103616
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 196      cgagcgagcgagcacgcgcgc 216
                |||||||||||||||||||||
Sbjct: 13377561 cgagcgagcgagcacgcgcgc 13377581



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 196      cgagcgagcgagcacgcgcg 215
                ||||||||||||||||||||
Sbjct: 10975323 cgagcgagcgagcacgcgcg 10975304
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>ref|XM_482025.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 342

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 252 ggacggccgtcgccgtcggc 271
           ||||||||||||||||||||
Sbjct: 99  ggacggccgtcgccgtcggc 118
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>ref|XM_473980.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 93  gccgtcgccgtcggcggcgg 74
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>ref|XM_466699.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 624 gccgtcgccgtcggcggcgg 605
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     gccgtcgccgtcggcggcgg 276
               ||||||||||||||||||||
Sbjct: 3436237 gccgtcgccgtcggcggcgg 3436218
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>ref|NM_185924.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2634

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 157 gccgtcgccgtcggcggcgg 138
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>ref|XM_479146.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1816

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 113 gccgtcgccgtcggcggcgg 94
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>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   cgagcgagcgagcacgcgcgcccc 219
             |||||||||||||| |||||||||
Sbjct: 32116 cgagcgagcgagcaagcgcgcccc 32139
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>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11,
              complete sequence
          Length = 177574

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 196    cgagcgagcgagcacgcgcgcccc 219
              |||||||||||||| |||||||||
Sbjct: 166695 cgagcgagcgagcaagcgcgcccc 166718
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>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0045P14, complete sequence
          Length = 121894

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cgagcgagcgagcacgcgcg 215
             ||||||||||||||||||||
Sbjct: 85654 cgagcgagcgagcacgcgcg 85635
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 296     gcgaggagcagcgccgggtgctgg 319
               ||||||||| ||||||||||||||
Sbjct: 1063557 gcgaggagctgcgccgggtgctgg 1063534
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>ref|XM_384245.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04069.1)
           partial mRNA
          Length = 3561

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  cctcctcgtcatcttcctcg 73
           ||||||||||||||||||||
Sbjct: 946 cctcctcgtcatcttcctcg 927
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>emb|AL359699.12| Human DNA sequence from clone RP11-130F5 on chromosome 1 Contains a
            SLAM family member 6 (SLAMF6) pseudogene, the gene for
            kinase interacting with leukemia-associated gene (KIS)
            and two CpG islands, complete sequence
          Length = 105902

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   cgcgcttctcccaccacacc 97
            ||||||||||||||||||||
Sbjct: 5501 cgcgcttctcccaccacacc 5482
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>emb|CR388002.6| Zebrafish DNA sequence from clone DKEY-75M8 in linkage group 1, complete
              sequence
          Length = 228120

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     ttccttcccatctcaaaaag 37
              ||||||||||||||||||||
Sbjct: 163503 ttccttcccatctcaaaaag 163522
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>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08,
              complete sequence
          Length = 166951

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    gccgtcgccgtcggcggcgg 276
              ||||||||||||||||||||
Sbjct: 163086 gccgtcgccgtcggcggcgg 163067
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>emb|BX511162.8| Zebrafish DNA sequence from clone DKEY-240B22 in linkage group 1,
             complete sequence
          Length = 119612

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    ttccttcccatctcaaaaag 37
             ||||||||||||||||||||
Sbjct: 15317 ttccttcccatctcaaaaag 15298
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>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence
          Length = 222209

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     agcctccgcttcccctcctc 60
              ||||||||||||||||||||
Sbjct: 113955 agcctccgcttcccctcctc 113974
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 257      gccgtcgccgtcggcggcgg 276
                ||||||||||||||||||||
Sbjct: 31990220 gccgtcgccgtcggcggcgg 31990201
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 252      ggacggccgtcgccgtcggc 271
                ||||||||||||||||||||
Sbjct: 17265066 ggacggccgtcgccgtcggc 17265085
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 257      gccgtcgccgtcggcggcgg 276
                ||||||||||||||||||||
Sbjct: 27008548 gccgtcgccgtcggcggcgg 27008567



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 257      gccgtcgccgtcggcggcgg 276
                ||||||||||||||||||||
Sbjct: 25201597 gccgtcgccgtcggcggcgg 25201578
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 257     gccgtcgccgtcggcggcgg 276
               ||||||||||||||||||||
Sbjct: 5799586 gccgtcgccgtcggcggcgg 5799567
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 196      cgagcgagcgagcacgcgcgcccc 219
                |||||||||||||| |||||||||
Sbjct: 16080946 cgagcgagcgagcaagcgcgcccc 16080969
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 257      gccgtcgccgtcggcggcgg 276
                ||||||||||||||||||||
Sbjct: 24183360 gccgtcgccgtcggcggcgg 24183379
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>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1316_A04
          Length = 87144

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   gccgtcgccgtcggcggcgg 276
             ||||||||||||||||||||
Sbjct: 73026 gccgtcgccgtcggcggcgg 73045
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>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0701E03
          Length = 183245

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    gccgtcgccgtcggcggcgg 276
              ||||||||||||||||||||
Sbjct: 115115 gccgtcgccgtcggcggcgg 115096
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>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0537F07
          Length = 147724

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 361 gccgtcgccgtcggcggcgg 342
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   gccgtcgccgtcggcggcgg 276
             ||||||||||||||||||||
Sbjct: 18268 gccgtcgccgtcggcggcgg 18249
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>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12,
             complete sequence
          Length = 161610

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tcgagcgagcgagcacgcgc 214
             ||||||||||||||||||||
Sbjct: 52350 tcgagcgagcgagcacgcgc 52331
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    gccgtcgccgtcggcggcgg 276
              ||||||||||||||||||||
Sbjct: 142101 gccgtcgccgtcggcggcgg 142120
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>dbj|AP005298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H03
          Length = 189893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    ggacggccgtcgccgtcggc 271
              ||||||||||||||||||||
Sbjct: 125691 ggacggccgtcgccgtcggc 125710
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>dbj|AP004272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0427D10
          Length = 154192

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   gccgtcgccgtcggcggcgg 276
             ||||||||||||||||||||
Sbjct: 11789 gccgtcgccgtcggcggcgg 11808
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>dbj|AK111216.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B05, full
           insert sequence
          Length = 2634

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 157 gccgtcgccgtcggcggcgg 138
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>dbj|AK071478.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092B08, full
           insert sequence
          Length = 1717

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 231 gccgtcgccgtcggcggcgg 250
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>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full
           insert sequence
          Length = 1817

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 gccgtcgccgtcggcggcgg 276
           ||||||||||||||||||||
Sbjct: 114 gccgtcgccgtcggcggcgg 95
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>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1003_H02
          Length = 124043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    gccgtcgccgtcggcggcgg 276
              ||||||||||||||||||||
Sbjct: 122084 gccgtcgccgtcggcggcgg 122065
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     gccgtcgccgtcggcggcgg 276
               ||||||||||||||||||||
Sbjct: 3684868 gccgtcgccgtcggcggcgg 3684887
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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   gccgtcgccgtcggcggcgg 276
             ||||||||||||||||||||
Sbjct: 10927 gccgtcgccgtcggcggcgg 10908
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>emb|AL808025.4| Mouse DNA sequence from clone RP23-45M22 on chromosome X, complete
             sequence
          Length = 227581

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   ccaccacctgtggatctcct 372
             ||||||||||||||||||||
Sbjct: 19160 ccaccacctgtggatctcct 19179
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>gb|AY048670.1| Streptomyces globisporus enediyne antitumor antibiotic C-1027
             biosynthetic gene cluster, complete sequence
          Length = 85163

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   catgaggcggcccaccacct 361
             ||||||||||||||||||||
Sbjct: 11480 catgaggcggcccaccacct 11499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,596,277
Number of Sequences: 3902068
Number of extensions: 3596277
Number of successful extensions: 69283
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68465
Number of HSP's gapped (non-prelim): 818
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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