ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464667.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.036
2gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 46 0.036
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.036
4dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.036
5dbj|AK066996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.036
6ref|XM_754661.1| Ustilago maydis 521 hypothetical protein (UM036... 44 0.14
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.14
8dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.14
9dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.14
10emb|CT573025.12| Mouse DNA sequence from clone RP23-36H17 on chr... 44 0.14
11emb|BX059458.1|CNS09I1I Single read from an extremity of a full-... 42 0.56
12emb|BX059457.1|CNS09I1H Single read from an extremity of a full-... 42 0.56
13ref|XM_307687.2| Anopheles gambiae str. PEST ENSANGP00000017104 ... 42 0.56
14gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete se... 40 2.2
15emb|Z68315.1|CEF28C6 Caenorhabditis elegans Cosmid F28C6, comple... 40 2.2
16gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 40 2.2
17emb|BX294150.1| Pirellula sp. strain 1 complete genome; segment ... 40 2.2
18ref|NM_063421.2| Caenorhabditis elegans Cleavage and Polyadenyla... 40 2.2
19gb|AC107304.5| Homo sapiens 3 BAC RP11-598F17 (Roswell Park Canc... 40 2.2
20dbj|AK109974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
21emb|AL772348.2| Mouse DNA sequence from clone RP23-316A19 on chr... 40 2.2
22gb|AC092957.6| Homo sapiens 3 BAC RP11-635I10 (Roswell Park Canc... 40 2.2
23dbj|D12511.1|MRUPUO M.rubens gene for putrescine oxidase, comple... 40 2.2
24gb|BC044545.1| Danio rerio zgc:55936, mRNA (cDNA clone MGC:55936... 38 8.7
25ref|XM_468118.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.7
26ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.7
27ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.7
28gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome... 38 8.7
29gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, com... 38 8.7
30gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.7
31ref|NM_205766.1| Danio rerio zgc:55936 (zgc:55936), transcript v... 38 8.7
32ref|NM_205553.1| Danio rerio zgc:55936 (zgc:55936), transcript v... 38 8.7
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 8.7
34emb|Z82076.1|CEW07G1 Caenorhabditis elegans Cosmid W07G1, comple... 38 8.7
35gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosom... 38 8.7
36emb|AL589746.11| Human DNA sequence from clone RP4-755G5 on chro... 38 8.7
37emb|AL451143.15| Human DNA sequence from clone RP11-369A11 on ch... 38 8.7
38emb|AL391708.8| Human DNA sequence from clone RP11-45O7 on chrom... 38 8.7
39emb|AL353722.8| Human DNA sequence from clone RP11-343D22 on chr... 38 8.7
40emb|AL158063.12| Human DNA sequence from clone RP11-29B2 on chro... 38 8.7
41gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, comple... 38 8.7
42gb|BC065643.1| Danio rerio zgc:55936, transcript variant 1, mRNA... 38 8.7
43gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 38 8.7
44gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, com... 38 8.7
45gb|AC103976.6| Homo sapiens chromosome 15, clone RP11-121E15, co... 38 8.7
46dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 8.7
47gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, com... 38 8.7
48gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, com... 38 8.7
49gb|AC026726.7| Homo sapiens chromosome 5 clone CTD-2249K22, comp... 38 8.7
50gb|AC079383.17| Homo sapiens Xp BAC RP11-30A20 (Roswell Park Can... 38 8.7
51gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 8.7
52gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-42... 38 8.7
53dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
54dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
56gb|AC023509.42| Homo sapiens 12 BAC RP11-793H13 (Roswell Park Ca... 38 8.7
57dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
58dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
59dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 38 8.7
60dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
61dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
62dbj|BS000215.2| Pan troglodytes chromosome 22 clone:RP43-183P07,... 38 8.7
63dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15,... 38 8.7
64dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
65dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.7
66dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.7
67dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.7
68gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complet... 38 8.7
69dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, com... 38 8.7
70dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.7
71gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 38 8.7
72gb|AC156348.3| Colobus guereza clone CH272-110A23, complete sequ... 38 8.7
73emb|AL928968.7| Zebrafish DNA sequence from clone CH211-103C14, ... 38 8.7
74gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosom... 38 8.7
75dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 38 8.7 
>ref|XM_464667.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3020

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 140 ggagcagagcgccgagcacttcagggggcaggcgcggct 178
           |||||||||||| ||||| |||||||| |||||| ||||
Sbjct: 117 ggagcagagcgcggagcagttcaggggccaggcgaggct 155
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 118   aggcgaccatggcggcggagctggagc 144
             |||||||| ||||||||||||||||||
Sbjct: 86379 aggcgaccgtggcggcggagctggagc 86353
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 140     ggagcagagcgccgagcacttcagggggcaggcgcggct 178
               |||||||||||| ||||| |||||||| |||||| ||||
Sbjct: 6598438 ggagcagagcgcggagcagttcaggggccaggcgaggct 6598476



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 126      atggcggcggagctggagc 144
                |||||||||||||||||||
Sbjct: 33156585 atggcggcggagctggagc 33156603



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 8        gcaaagcaaagtgcttttt 26
                |||||||||||||||||||
Sbjct: 21424064 gcaaagcaaagtgcttttt 21424046
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>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0027A02
          Length = 140402

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 140   ggagcagagcgccgagcacttcagggggcaggcgcggct 178
             |||||||||||| ||||| |||||||| |||||| ||||
Sbjct: 32813 ggagcagagcgcggagcagttcaggggccaggcgaggct 32851
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>dbj|AK066996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089H24, full
           insert sequence
          Length = 3020

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 140 ggagcagagcgccgagcacttcagggggcaggcgcggct 178
           |||||||||||| ||||| |||||||| |||||| ||||
Sbjct: 117 ggagcagagcgcggagcagttcaggggccaggcgaggct 155
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>ref|XM_754661.1| Ustilago maydis 521 hypothetical protein (UM03607.1) partial mRNA
          Length = 5148

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 105 ccaccgacggccgaggcgaccatggc 130
           ||||||||||||||| ||||||||||
Sbjct: 539 ccaccgacggccgagtcgaccatggc 514
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 140      ggagcagagcgccgagcacttcagggggcaggcg 173
                |||||||||||| ||||| |||||||| ||||||
Sbjct: 12319124 ggagcagagcgcggagcagttcaggggccaggcg 12319091
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 109     cgacggccgaggcgaccatggc 130
               ||||||||||||||||||||||
Sbjct: 5315985 cgacggccgaggcgaccatggc 5316006



 Score = 42.1 bits (21), Expect = 0.56
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 108     ccgacggccgaggcgaccatggcgg 132
               |||||||||||||||||| ||||||
Sbjct: 2745308 ccgacggccgaggcgaccctggcgg 2745332
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>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0578B12
          Length = 151192

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 140   ggagcagagcgccgagcacttcagggggcaggcg 173
             |||||||||||| ||||| |||||||| ||||||
Sbjct: 35584 ggagcagagcgcggagcagttcaggggccaggcg 35551
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>emb|CT573025.12| Mouse DNA sequence from clone RP23-36H17 on chromosome 14, complete
             sequence
          Length = 116550

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    tttttggttaaagtatataatc 43
             ||||||||||||||||||||||
Sbjct: 75063 tttttggttaaagtatataatc 75042
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>emb|BX059458.1|CNS09I1I Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC4BC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 920

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  tctctccttccctcacactcc 106
           |||||||||||||||||||||
Sbjct: 405 tctctccttccctcacactcc 425
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>emb|BX059457.1|CNS09I1H Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC4BC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 925

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  tctctccttccctcacactcc 106
           |||||||||||||||||||||
Sbjct: 922 tctctccttccctcacactcc 902
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>ref|XM_307687.2| Anopheles gambiae str. PEST ENSANGP00000017104
           (ENSANGG00000014615), partial mRNA
          Length = 672

 Score = 42.1 bits (21), Expect = 0.56
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  tctctccttccctcacactcc 106
           |||||||||||||||||||||
Sbjct: 474 tctctccttccctcacactcc 454
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>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence
          Length = 378763

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     tctctccttccctcacactc 105
              ||||||||||||||||||||
Sbjct: 193567 tctctccttccctcacactc 193548
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>emb|Z68315.1|CEF28C6 Caenorhabditis elegans Cosmid F28C6, complete sequence
          Length = 24032

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   ggcggcggagctggagcaga 147
             ||||||||||||||||||||
Sbjct: 13359 ggcggcggagctggagcaga 13378
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>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    gaccatggcggcggagctgg 141
              ||||||||||||||||||||
Sbjct: 394720 gaccatggcggcggagctgg 394739
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>emb|BX294150.1| Pirellula sp. strain 1 complete genome; segment 18/24
          Length = 283050

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     agcatccgacgcttgcaaat 86
              ||||||||||||||||||||
Sbjct: 121403 agcatccgacgcttgcaaat 121422
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>ref|NM_063421.2| Caenorhabditis elegans Cleavage and Polyadenylation Factor family
           member (cpf-1) (cpf-1) mRNA, complete cds
          Length = 1312

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 128 ggcggcggagctggagcaga 147
           ||||||||||||||||||||
Sbjct: 131 ggcggcggagctggagcaga 112
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>gb|AC107304.5| Homo sapiens 3 BAC RP11-598F17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179532

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     aaagtgctttttggttaaag 34
              ||||||||||||||||||||
Sbjct: 137237 aaagtgctttttggttaaag 137256
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>dbj|AK109974.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-C09, full
           insert sequence
          Length = 4771

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 108 ccgacggccgaggcgaccatggcg 131
           |||||||||||| |||||||||||
Sbjct: 78  ccgacggccgagtcgaccatggcg 55
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>emb|AL772348.2| Mouse DNA sequence from clone RP23-316A19 on chromosome X, complete
             sequence
          Length = 173365

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    atctctccttccctcacact 104
             ||||||||||||||||||||
Sbjct: 47304 atctctccttccctcacact 47323
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>gb|AC092957.6| Homo sapiens 3 BAC RP11-635I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161585

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    aaagcaaagtgctttttggttaaa 33
             |||||||||||||||||| |||||
Sbjct: 50127 aaagcaaagtgctttttgtttaaa 50150
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>dbj|D12511.1|MRUPUO M.rubens gene for putrescine oxidase, complete cds
          Length = 2386

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  gaccatggcggcggagctgg 141
            ||||||||||||||||||||
Sbjct: 1195 gaccatggcggcggagctgg 1214
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>gb|BC044545.1| Danio rerio zgc:55936, mRNA (cDNA clone MGC:55936 IMAGE:3819258),
           complete cds
          Length = 1919

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 ggcggcggagctggagcag 146
           |||||||||||||||||||
Sbjct: 878 ggcggcggagctggagcag 896
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>ref|XM_468118.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1920

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 126 atggcggcggagctggagc 144
           |||||||||||||||||||
Sbjct: 37  atggcggcggagctggagc 55
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>ref|XM_478349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1639

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 128 ggcggcggagctggagcagagcg 150
           |||||||||||| ||||||||||
Sbjct: 795 ggcggcggagctcgagcagagcg 773
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>ref|XM_478348.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1914

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 128 ggcggcggagctggagcagagcg 150
           |||||||||||| ||||||||||
Sbjct: 873 ggcggcggagctcgagcagagcg 895
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>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map
             near C10769, complete sequence
          Length = 194856

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 118   aggcgaccatggcggcggagctggagc 144
             |||| |||| |||||||||||||||||
Sbjct: 96019 aggcaaccacggcggcggagctggagc 95993
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>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence
          Length = 179087

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 78    cttgcaaatctctccttcc 96
             |||||||||||||||||||
Sbjct: 10325 cttgcaaatctctccttcc 10343
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>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077L08, complete sequence
          Length = 115640

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 119   ggcgaccatggcggcggag 137
             |||||||||||||||||||
Sbjct: 51632 ggcgaccatggcggcggag 51614
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>ref|NM_205766.1| Danio rerio zgc:55936 (zgc:55936), transcript variant 2, mRNA
          Length = 1919

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 ggcggcggagctggagcag 146
           |||||||||||||||||||
Sbjct: 878 ggcggcggagctggagcag 896
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>ref|NM_205553.1| Danio rerio zgc:55936 (zgc:55936), transcript variant 1, mRNA
          Length = 1880

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 ggcggcggagctggagcag 146
           |||||||||||||||||||
Sbjct: 825 ggcggcggagctggagcag 843
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 118      aggcgaccatggcggcggagctggagc 144
                |||| |||| |||||||||||||||||
Sbjct: 29043272 aggcaaccacggcggcggagctggagc 29043298
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>emb|Z82076.1|CEW07G1 Caenorhabditis elegans Cosmid W07G1, complete sequence
          Length = 36480

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    aaagtgctttttggttaaa 33
             |||||||||||||||||||
Sbjct: 15183 aaagtgctttttggttaaa 15201



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    aaagtgctttttggttaaa 33
             |||||||||||||||||||
Sbjct: 12133 aaagtgctttttggttaaa 12115
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>gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosome 3, complete sequence
          Length = 177109

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 78    cttgcaaatctctccttcc 96
             |||||||||||||||||||
Sbjct: 34896 cttgcaaatctctccttcc 34878
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>emb|AL589746.11| Human DNA sequence from clone RP4-755G5 on chromosome 1 Contains part
            of the MMEL2 gene for membrane metallo-endopeptidase-like
            2, complete sequence
          Length = 23910

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 149  cgccgagcacttcaggggg 167
            |||||||||||||||||||
Sbjct: 8061 cgccgagcacttcaggggg 8043
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>emb|AL451143.15| Human DNA sequence from clone RP11-369A11 on chromosome 6, complete
             sequence
          Length = 22224

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 18074 ttttggttaaagtatataa 18092
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>emb|AL391708.8| Human DNA sequence from clone RP11-45O7 on chromosome 10 Contains part
             of the LHPP gene for phospholysine phosphohistidine
             inorganic pyrophosphate phosphatase, complete sequence
          Length = 53675

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tccttccctcacactccac 108
             |||||||||||||||||||
Sbjct: 11858 tccttccctcacactccac 11840
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>emb|AL353722.8| Human DNA sequence from clone RP11-343D22 on chromosome 10, complete
            sequence
          Length = 34523

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   ttttggttaaagtatataa 41
            |||||||||||||||||||
Sbjct: 4868 ttttggttaaagtatataa 4850
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>emb|AL158063.12| Human DNA sequence from clone RP11-29B2 on chromosome 13 Contains the
            TPP2 gene for tripeptidyl peptidase II, a novel gene and
            2 CpG islands, complete sequence
          Length = 158481

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 23   ttttggttaaagtatataa 41
            |||||||||||||||||||
Sbjct: 6116 ttttggttaaagtatataa 6134
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>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome
          Length = 156789

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   cggccgaggcgaccatggc 130
             |||||||||||||||||||
Sbjct: 16807 cggccgaggcgaccatggc 16825
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>gb|BC065643.1| Danio rerio zgc:55936, transcript variant 1, mRNA (cDNA clone
           MGC:77313 IMAGE:6966502), complete cds
          Length = 1880

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 128 ggcggcggagctggagcag 146
           |||||||||||||||||||
Sbjct: 825 ggcggcggagctggagcag 843
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     gagcatccgacgcttgcaa 84
              |||||||||||||||||||
Sbjct: 116701 gagcatccgacgcttgcaa 116683



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 66    gagcatccgacgcttgcaa 84
             |||||||||||||||||||
Sbjct: 76988 gagcatccgacgcttgcaa 76970
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>gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, complete sequence
          Length = 143479

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 33195 ttttggttaaagtatataa 33177
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>gb|AC103976.6| Homo sapiens chromosome 15, clone RP11-121E15, complete sequence
          Length = 182826

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 26318 ttttggttaaagtatataa 26336
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 113     ggccgaggcgaccatggcggcgg 135
               |||||||||| ||||||||||||
Sbjct: 1461071 ggccgaggcggccatggcggcgg 1461093
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>gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, complete sequence
          Length = 189047

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 11175 ttttggttaaagtatataa 11193
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>gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, complete sequence
          Length = 188519

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 34927 ttttggttaaagtatataa 34909
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>gb|AC026726.7| Homo sapiens chromosome 5 clone CTD-2249K22, complete sequence
          Length = 156825

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     ttttggttaaagtatataa 41
              |||||||||||||||||||
Sbjct: 123256 ttttggttaaagtatataa 123238
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>gb|AC079383.17| Homo sapiens Xp BAC RP11-30A20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151276

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     agcaaagtgctttttggtt 30
              |||||||||||||||||||
Sbjct: 111977 agcaaagtgctttttggtt 111959
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 119     ggcgaccatggcggcggag 137
               |||||||||||||||||||
Sbjct: 1671045 ggcgaccatggcggcggag 1671063



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 126    atggcggcggagctggagc 144
              |||||||||||||||||||
Sbjct: 976667 atggcggcggagctggagc 976685
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>gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-424E9, complete sequence
          Length = 162773

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 52490 ttttggttaaagtatataa 52472
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 128      ggcggcggagctggagcagagcg 150
                |||||||||||| ||||||||||
Sbjct: 19409811 ggcggcggagctcgagcagagcg 19409789



 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 8        gcaaagcaaagtgcttttt 26
                |||||||||||||||||||
Sbjct: 18488987 gcaaagcaaagtgcttttt 18489005
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 119     ggcgaccatggcggcggag 137
               |||||||||||||||||||
Sbjct: 1872858 ggcgaccatggcggcggag 1872840
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                           
Query: 118      aggcgaccatggcggcggagctggagc 144
                |||| |||| |||||||||||||||||
Sbjct: 29134694 aggcaaccacggcggcggagctggagc 29134720
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>gb|AC023509.42| Homo sapiens 12 BAC RP11-793H13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172558

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 83     aaatctctccttccctcac 101
              |||||||||||||||||||
Sbjct: 120466 aaatctctccttccctcac 120484
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>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0409B11
          Length = 168354

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 128   ggcggcggagctggagcagagcg 150
             |||||||||||| ||||||||||
Sbjct: 99349 ggcggcggagctcgagcagagcg 99327
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>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020C11
          Length = 163328

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     gcaaagcaaagtgcttttt 26
             |||||||||||||||||||
Sbjct: 18991 gcaaagcaaagtgcttttt 18973
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 119     ggcgaccatggcggcggag 137
               |||||||||||||||||||
Sbjct: 2869280 ggcgaccatggcggcggag 2869262
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     gcaaagcaaagtgcttttt 26
             |||||||||||||||||||
Sbjct: 17743 gcaaagcaaagtgcttttt 17761
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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     gcaaagcaaagtgcttttt 26
             |||||||||||||||||||
Sbjct: 80835 gcaaagcaaagtgcttttt 80853
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>dbj|BS000215.2| Pan troglodytes chromosome 22 clone:RP43-183P07, map 22, complete
              sequences
          Length = 151501

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     ttttggttaaagtatataa 41
              |||||||||||||||||||
Sbjct: 115566 ttttggttaaagtatataa 115548
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>dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15, map 22, complete
             sequences
          Length = 164711

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 12094 ttttggttaaagtatataa 12076
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>dbj|AP004257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1369_G08
          Length = 104190

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 126   atggcggcggagctggagc 144
             |||||||||||||||||||
Sbjct: 72245 atggcggcggagctggagc 72263
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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     gcaaagcaaagtgcttttt 26
             |||||||||||||||||||
Sbjct: 84017 gcaaagcaaagtgcttttt 83999
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>dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A09, full
           insert sequence
          Length = 1638

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 128 ggcggcggagctggagcagagcg 150
           |||||||||||| ||||||||||
Sbjct: 794 ggcggcggagctcgagcagagcg 772
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>dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E03, full
           insert sequence
          Length = 1914

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 128 ggcggcggagctggagcagagcg 150
           |||||||||||| ||||||||||
Sbjct: 872 ggcggcggagctcgagcagagcg 894
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>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence
          Length = 45702

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   atggcggcggagctggagc 144
             |||||||||||||||||||
Sbjct: 18694 atggcggcggagctggagc 18676
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>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence
          Length = 106873

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 112  cggccgaggcgaccatggc 130
            |||||||||||||||||||
Sbjct: 7868 cggccgaggcgaccatggc 7886
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>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 12184 ttttggttaaagtatataa 12166
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                              
Query: 129     gcggcggagctggagcagagcgccgagcact 159
               |||||||| |||||| ||| |||||||||||
Sbjct: 3219116 gcggcggaactggaggagatcgccgagcact 3219086
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>gb|AC156348.3| Colobus guereza clone CH272-110A23, complete sequence
          Length = 115353

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    tttttggttaaagtatata 40
             |||||||||||||||||||
Sbjct: 51657 tttttggttaaagtatata 51639
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>emb|AL928968.7| Zebrafish DNA sequence from clone CH211-103C14, complete sequence
          Length = 173210

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     caaagcaaagtgctttttg 27
             |||||||||||||||||||
Sbjct: 83312 caaagcaaagtgctttttg 83294
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>gb|AC164160.5| Mus musculus BAC clone RP23-343P15 from chromosome 7, complete sequence
          Length = 235030

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 4     actcgcaaagcaaagtgcttttt 26
             |||| ||||||||||||||||||
Sbjct: 81110 actctcaaagcaaagtgcttttt 81088
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>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292
             region, complete sequence
          Length = 186930

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    ttttggttaaagtatataa 41
             |||||||||||||||||||
Sbjct: 39971 ttttggttaaagtatataa 39953


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,444,526
Number of Sequences: 3902068
Number of extensions: 1444526
Number of successful extensions: 114775
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113580
Number of HSP's gapped (non-prelim): 1195
length of query: 178
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 156
effective length of database: 17,147,199,772
effective search space: 2674963164432
effective search space used: 2674963164432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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