Clone Name | bastl40e07 |
---|---|
Clone Library Name | barley_pub |
>TR140_MOUSE (Q7TQA4) Taste receptor type 2 member 140 (T2R140) (T2R40) (T2R8)| (T2R13) (mT2r64) (Taste receptor family B member 3) (mTRB3) (mTRB5) Length = 312 Score = 32.0 bits (71), Expect = 0.78 Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%) Frame = +3 Query: 75 QIWLLISLQELGIL*AIL-VMFLHFLES*LTKEKLVLVIYNQNW--VSHLNPWKLLLCL 242 QI+ +++ L + ++L V+F L S L + VL+I+N +W ++H N W L CL Sbjct: 46 QIFTALAISRLAFVWSLLTVLFTSELYSALMTTRKVLIIFNNSWTVINHFNIW-LATCL 103
>MYCB_XENLA (P15171) Myc-B protein (Myc II protein) (C-Myc II)| Length = 420 Score = 31.6 bits (70), Expect = 1.0 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = -2 Query: 252 VDVSGTRAASKDSDERPSSDCISPILTFPWSISFLRNVETSP 127 +++ GT +S + + PSSDC+ P + FP+ ++ + +SP Sbjct: 165 LNLGGTNRSSHEFLQDPSSDCVDPSVVFPYPLNDSISNASSP 206
>SEC7_YEAST (P11075) Protein transport protein SEC7| Length = 2009 Score = 30.4 bits (67), Expect = 2.3 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Frame = +3 Query: 36 VLSEAWKVNKFNA----QIWLLISLQELGIL*AILVMFLHFLES 155 VLS+ W+VN+FN+ +WL +L + L ++ +F H+ ES Sbjct: 1592 VLSKHWEVNQFNSHDDLSVWLSTTL--IQALRNLIALFTHYFES 1633
>MYC1_XENLA (P06171) Myc-A protein (Myc I protein) (C-Myc I)| Length = 419 Score = 30.0 bits (66), Expect = 2.9 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -2 Query: 252 VDVSGTRAASKDSDERPSSDCISPILTFPWSISFLRNVETSP 127 + + GT +S + PSSDC+ P + FP+ ++ + +SP Sbjct: 166 LSLGGTHRSSHGFLQDPSSDCVDPSVVFPYPLNDSISNASSP 207
>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)| Length = 588 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -3 Query: 458 HLENNDQMKKCLPQVLSQVVNQLRSYFHFYPMDLPVPQNPLLEISLE 318 +L N D +K + VL + VN R + F+P PQ+ L S E Sbjct: 280 YLANQDNKEKLIIAVLHRPVNNPRQFEEFFPAGSQRPQSYLRAFSRE 326
>ASPG_DIRIM (Q9U518) L-asparaginase (EC 3.5.1.1) (L-asparagine amidohydrolase)| (DiAsp) Length = 590 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +2 Query: 83 VVDQSTGAGNLVSNSGDVSTFLRKLIDQGKVSI 181 VV Q+ GAGN+ S+ D+ L+K +D+G + I Sbjct: 264 VVLQTFGAGNMPSHRTDIIDELKKAVDRGCIII 296
>PMP12_CHLPN (Q9Z3D6) Probable outer membrane protein pmp12 precursor| (Polymorphic membrane protein 12) (Outer membrane protein 13) Length = 514 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 8/58 (13%) Frame = +2 Query: 290 LQNSIHVPP-VQVKSLK---EGSVAPEGPLDRSESKNVTDLQL----GSELEEGISSF 439 + NSIH+ Q K+L+ E V P+ SES +TDL + G E EG SF Sbjct: 264 IHNSIHLQSGAQFKNLRAVSESGVYFYDPISHSESHKITDLVINAPEGKETYEGTISF 321
>XERD_LISMO (Q8Y5V0) Tyrosine recombinase xerD| Length = 297 Score = 28.5 bits (62), Expect = 8.6 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = -3 Query: 422 PQVLSQVVNQLRSYFHFYPMDLPVPQNPLLEISLEQEAR 306 P+ +++ + LRS+FH+ D + +P+++I ++A+ Sbjct: 68 PRSVARYIASLRSFFHYLMHDGKMSHDPMIQIETPKQAQ 106
>XERD_LISIN (Q92A53) Tyrosine recombinase xerD| Length = 297 Score = 28.5 bits (62), Expect = 8.6 Identities = 10/39 (25%), Positives = 25/39 (64%) Frame = -3 Query: 422 PQVLSQVVNQLRSYFHFYPMDLPVPQNPLLEISLEQEAR 306 P+ +++ + LRS+FH+ D + +P+++I ++A+ Sbjct: 68 PRSVARYIASLRSFFHYLMHDGKMSHDPMIQIETPKQAQ 106
>UBID_ECO57 (P58194) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-)| (Polyprenyl p-hydroxybenzoate decarboxylase) Length = 497 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Frame = +2 Query: 263 GLKLKIIKLLQNSIHVPP----VQVKSLKEGSVAPEGP 364 G K +++K + N + VP V +++G +APEGP Sbjct: 250 GTKTEVVKCISNDLEVPASAEIVLEGYIEQGEMAPEGP 287 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,169,730 Number of Sequences: 219361 Number of extensions: 1180756 Number of successful extensions: 3442 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3386 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3440 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)