>ref|NM_001024889.1| Rattus norvegicus reproductive homeobox on X chromosome 4
           (LOC313451), mRNA
          Length = 829

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 40  ctccttccccatctgctgctgc 61
           ||||||||||||||||||||||
Sbjct: 175 ctccttccccatctgctgctgc 154

>gb|DQ058652.1| Rattus norvegicus reproductive homeobox on X chromosome 4 mRNA,
           complete cds
          Length = 829

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 40  ctccttccccatctgctgctgc 61
           ||||||||||||||||||||||
Sbjct: 175 ctccttccccatctgctgctgc 154

>ref|NM_129417.1| Arabidopsis thaliana acid phosphatase AT2G38600 mRNA, complete cds
          Length = 756

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 tgagataaactttgatttgg 254
           ||||||||||||||||||||
Sbjct: 265 tgagataaactttgatttgg 246

>ref|NM_197848.1| Oryza sativa (japonica cultivar-group) putative AT-Hook DNA-binding
           protein (OSJNBa0003O19.1), mRNA
          Length = 1602

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  tcctccgcctccggcggcgc 36
           ||||||||||||||||||||
Sbjct: 778 tcctccgcctccggcggcgc 797

>ref|XM_587937.2| PREDICTED: Bos taurus similar to Protein C14orf114 (LOC539532),
           mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 178 ccttctgctgcgctgcagcaactg 201
           ||||||||| ||||||||||||||
Sbjct: 687 ccttctgcttcgctgcagcaactg 710

>gb|AC163269.3| Mus musculus chromosome 15, clone RP24-276M6, complete sequence
          Length = 172683

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gctgcagcaactgcaacaac 208
              ||||||||||||||||||||
Sbjct: 160048 gctgcagcaactgcaacaac 160029

>ref|XM_547872.2| PREDICTED: Canis familiaris similar to Protein C14orf114,
           transcript variant 1 (LOC490750), mRNA
          Length = 1986

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 178 ccttctgctgcgctgcagcaactg 201
           ||||||||| ||||||||||||||
Sbjct: 672 ccttctgcttcgctgcagcaactg 695

>ref|XM_861916.1| PREDICTED: Canis familiaris similar to Protein C14orf114,
           transcript variant 2 (LOC490750), mRNA
          Length = 1683

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 178 ccttctgctgcgctgcagcaactg 201
           ||||||||| ||||||||||||||
Sbjct: 291 ccttctgcttcgctgcagcaactg 314

>emb|AL161742.7| Human DNA sequence from clone RP4-597J3 on chromosome 1p32.1-32.3
             Contains the 5' end of the ROR1 gene for receptor tyrosine
             kinase-like orphan receptor 1, a ribosomal protein L19
             (RPL19) pseudogene, a cofilin 1 (non-muscle) (CFL1)
             pseudogene and a CpG island, complete sequence
          Length = 114409

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   tggagtggttgtgtagtgat 277
             ||||||||||||||||||||
Sbjct: 71949 tggagtggttgtgtagtgat 71968

>gb|AC005499.3| Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete
             sequence
          Length = 107541

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   tgagataaactttgatttgg 254
             ||||||||||||||||||||
Sbjct: 70969 tgagataaactttgatttgg 70988

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       tcctccgcctccggcggcgc 36
                ||||||||||||||||||||
Sbjct: 22224863 tcctccgcctccggcggcgc 22224844

>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
             sequence
          Length = 172427

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    tcctccgcctccggcggcgc 36
             ||||||||||||||||||||
Sbjct: 42106 tcctccgcctccggcggcgc 42087

>gb|AC022096.7| Homo sapiens chromosome 5 clone CTB-43D14, complete sequence
          Length = 170624

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   gctctctccttccccatctg 54
            ||||||||||||||||||||
Sbjct: 3542 gctctctccttccccatctg 3561

>dbj|AK108363.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C12, full
           insert sequence
          Length = 1043

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  tcctccgcctccggcggcgc 36
           ||||||||||||||||||||
Sbjct: 225 tcctccgcctccggcggcgc 244

>gb|AY609905.1| Sus scrofa clone Clu_41847.scr.msk.p1.Contig1, mRNA sequence
          Length = 1303

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                       
Query: 63  tcgtctggtggtgctgg-gtttgggatg 89
           ||||||||||||||||| ||||||||||
Sbjct: 122 tcgtctggtggtgctggtgtttgggatg 149

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 17       tcctccgcctccggcggcgc 36
                ||||||||||||||||||||
Sbjct: 22236931 tcctccgcctccggcggcgc 22236912

>gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, complete sequence
          Length = 154367

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   gctgcagcaactgcaacaac 208
             ||||||||||||||||||||
Sbjct: 96941 gctgcagcaactgcaacaac 96922

>gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, complete sequence
          Length = 184981

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     gctctctccttccccatctg 54
              ||||||||||||||||||||
Sbjct: 162177 gctctctccttccccatctg 162196


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,937,598
Number of Sequences: 3902068
Number of extensions: 2937598
Number of successful extensions: 59682
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 59639
Number of HSP's gapped (non-prelim): 44
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)