>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC|
           2.7.11.1)
          Length = 901

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +3

Query: 375 PSWAYGLGSMGSISVSYGE 431
           P WA GLGSM SI+VSYGE
Sbjct: 19  PGWACGLGSMSSIAVSYGE 37

>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)|
          Length = 892

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query: 99  PAAPHPDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTPMS--AGIRGKGDD 251
           P+ P P     C ++    + +  P VH SPH P  AT P S  +   G+GDD
Sbjct: 450 PSLPRPPG---CPAQQGGSAPIDPPPVHESPHPPLPATEPASRLSSEEGEGDD 499

>SAM68_HUMAN (Q07666) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/43 (44%), Positives = 20/43 (46%)
 Frame = +3

Query: 90  SSQPAAPHPDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTP 218
           S QP  PH        SRG AR+    PA    P  PPSAT P
Sbjct: 35  SRQPPLPHRSRGGGGGSRGGARAS---PATQPPPLLPPSATGP 74

>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -1

Query: 369  RLGSRERELEHCPFLEARS*CRRDSFAGSAVTIAAGPPVCRR 244
            R   ++R LE  P L A +    DS  G  +    GPP CRR
Sbjct: 2060 RRDRKQRSLEKGPSLSADTDGAPDSTVGPGLPTGEGPPGCRR 2101

>MTR1L_MOUSE (O88495) Melatonin-related receptor (G protein-coupled receptor 50)|
           (H9)
          Length = 583

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 114 PDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTPMSAGIRGKGDDI 254
           P ++   S  G  +S  ++P   SS HC P++     A +  KGD +
Sbjct: 399 PASIHHKSISGHPKSASVYPKPASSVHCKPASVHFKPASVHFKGDSV 445

>DLL3_XENLA (P54655) Homeobox protein DLL-3 (XDLL-3)|
          Length = 289

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 90  SSQPAAPH-PDALRLCSSRGDARSLLLFPAVHSSPHCPPSATTPMSAGIRGKG 245
           SS P A + P +  +   +G +RSL   P VHS P   PS+++P S+ +   G
Sbjct: 209 SSDPMACNSPQSPVVWEPQGSSRSLSHHPHVHSHPQ--PSSSSPASSYLENSG 259

>DNBI_BHV2B (P12639) Major DNA-binding protein|
          Length = 1186

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
 Frame = -2

Query: 311 NAGEIPSPAQPSPSPLGHQYVVALPPDTCRHWCXXXXXXXXXXXXXGEEQQGAGVTSGRA 132
           N  +  +  + SP PLG+ Y   LPP+                        G  V SG  
Sbjct: 3   NKQKTATTVKVSPGPLGYVYARRLPPEGLTELALLSARSADSDTAVLPLIAGLTVESGFD 62

Query: 131 ETQS--VGVRCRGLGGT 87
              +  VG R  G+GGT
Sbjct: 63  VNVAVVVGSRTTGVGGT 79

>OLIG2_HUMAN (Q13516) Oligodendrocyte transcription factor 2 (Oligo2) (Basic|
           helix-loop-helix protein class B 1) (Protein kinase
           C-binding protein RACK17) (Protein kinase C-binding
           protein 2)
          Length = 323

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = +3

Query: 90  SSQPAAPHPDALRL-CSSRGDARSLLLFPAVHSS--PHCPPSATTPMSAGIRG 239
           SS+P++P PD L L   S+G + S      V SS    CPP     +SA +RG
Sbjct: 9   SSRPSSPEPDDLFLPARSKGSSGSAFTGGTVSSSTPSDCPPE----LSAELRG 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,421,343
Number of Sequences: 219361
Number of extensions: 993897
Number of successful extensions: 3716
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3710
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)