ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 0.047
2gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Canc... 42 0.047
3gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, com... 38 0.73
4gb|AC131721.4| Mus musculus BAC clone RP23-142L24 from chromosom... 38 0.73
5gb|AC167554.9| Mus musculus chromosome 15, clone RP24-281M24, co... 38 0.73
6gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, c... 38 0.73
7emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, B... 38 0.73
8gb|AF005047.1|AF005047 Arabidopsis thaliana transport inhibitor ... 38 0.73
9ref|XM_481213.1| Oryza sativa (japonica cultivar-group), mRNA 36 2.9
10ref|XM_483577.1| Oryza sativa (japonica cultivar-group), mRNA 36 2.9
11ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 36 2.9
12ref|NM_196332.1| Oryza sativa (japonica cultivar-group) hypothet... 36 2.9
13ref|XM_473057.1| Oryza sativa (japonica cultivar-group), predic... 36 2.9
14ref|XM_471730.1| Oryza sativa (japonica cultivar-group), predic... 36 2.9
15gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 36 2.9
16gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complet... 36 2.9
17gb|AC093131.2| Papio anubis clone RP41-51G4, complete sequence 36 2.9
18emb|AJ879978.1| Gallus gallus partial mRNA for immunoglobulin-li... 36 2.9
19emb|AJ879969.1| Gallus gallus partial mRNA for immunoglobulin-li... 36 2.9
20emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 36 2.9
21gb|AC155718.4| Mus musculus 10 BAC RP24-217J7 (Roswell Park Canc... 36 2.9
22emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4,... 36 2.9
23gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chrom... 36 2.9
24gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence 36 2.9
25gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome... 36 2.9
26gb|DQ298186.1| Oryza sativa (japonica cultivar-group) WRKY trans... 36 2.9
27gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 geno... 36 2.9
28gb|AC098588.3| Homo sapiens BAC clone RP11-291L15 from 4, comple... 36 2.9
29gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence 36 2.9
30dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
31dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
36emb|BX663529.7| Chicken DNA sequence from clone WAG-19H9, comple... 36 2.9
37gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromoso... 36 2.9
38dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
39dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
40dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
41dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
42gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 36 2.9
43dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
44dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic D... 36 2.9
45dbj|AK073491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 2.9
46dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 2.9
47dbj|AK065335.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 2.9
48emb|CR388011.14| Zebrafish DNA sequence from clone CH211-135J15 ... 36 2.9
49dbj|AK061996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 2.9
50emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 36 2.9
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 36 2.9
52emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chrom... 36 2.9 
>gb|AC079277.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-65N7, complete
             sequence
          Length = 190328

 Score = 42.1 bits (21), Expect = 0.047
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 8     aaacacggggaaggagaagga 28
             |||||||||||||||||||||
Sbjct: 15009 aaacacggggaaggagaagga 15029
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>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226538

 Score = 42.1 bits (21), Expect = 0.047
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      aaacacggggaaggagaagga 28
              |||||||||||||||||||||
Sbjct: 100996 aaacacggggaaggagaagga 100976
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>gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, complete sequence
          Length = 133354

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    gggaaggagaaggaggtcc 33
             |||||||||||||||||||
Sbjct: 13987 gggaaggagaaggaggtcc 14005
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>gb|AC131721.4| Mus musculus BAC clone RP23-142L24 from chromosome 15, complete sequence
          Length = 230892

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     gggaaggagaaggaggtcc 33
              |||||||||||||||||||
Sbjct: 195842 gggaaggagaaggaggtcc 195860
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>gb|AC167554.9| Mus musculus chromosome 15, clone RP24-281M24, complete sequence
          Length = 166875

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 15    gggaaggagaaggaggtcc 33
             |||||||||||||||||||
Sbjct: 17457 gggaaggagaaggaggtcc 17439
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>gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, complete sequence
          Length = 194163

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 15     gggaaggagaaggaggtcc 33
              |||||||||||||||||||
Sbjct: 145939 gggaaggagaaggaggtcc 145921
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>emb|AL163816.1|ATT20O10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20O10
          Length = 83122

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    ggggaaggagaaggaggtc 32
             |||||||||||||||||||
Sbjct: 19284 ggggaaggagaaggaggtc 19302
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>gb|AF005047.1|AF005047 Arabidopsis thaliana transport inhibitor response 1 (TIR1) gene,
          complete cds
          Length = 3530

 Score = 38.2 bits (19), Expect = 0.73
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 14 ggggaaggagaaggaggtc 32
          |||||||||||||||||||
Sbjct: 42 ggggaaggagaaggaggtc 24
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>ref|XM_481213.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1650

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 12  acggggaaggagaaggag 29
           ||||||||||||||||||
Sbjct: 136 acggggaaggagaaggag 153
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>ref|XM_483577.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 510

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 14  ggggaaggagaaggaggt 31
           ||||||||||||||||||
Sbjct: 318 ggggaaggagaaggaggt 335
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>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 12  acggggaaggagaaggag 29
           ||||||||||||||||||
Sbjct: 482 acggggaaggagaaggag 499
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>ref|NM_196332.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0011L09.5), mRNA
          Length = 1137

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 13  cggggaaggagaaggagg 30
           ||||||||||||||||||
Sbjct: 415 cggggaaggagaaggagg 432
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>ref|XM_473057.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 14  ggggaaggagaaggaggt 31
           ||||||||||||||||||
Sbjct: 447 ggggaaggagaaggaggt 464
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>ref|XM_471730.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1302

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 13   cggggaaggagaaggagg 30
            ||||||||||||||||||
Sbjct: 1058 cggggaaggagaaggagg 1075
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>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0014C03, complete sequence
          Length = 143739

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    cggggaaggagaaggagg 30
             ||||||||||||||||||
Sbjct: 27922 cggggaaggagaaggagg 27905
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>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence
          Length = 240379

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 74591 ggggaaggagaaggaggt 74574
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>gb|AC093131.2| Papio anubis clone RP41-51G4, complete sequence
          Length = 181049

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 59085 ggggaaggagaaggaggt 59102
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>emb|AJ879978.1| Gallus gallus partial mRNA for immunoglobulin-like receptor
           CHIR-Ig1-28 (CHIR-Ig1-28 gene)
          Length = 234

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 9   aacacggggaaggagaaggagg 30
           |||| |||||||||||||||||
Sbjct: 112 aacaaggggaaggagaaggagg 133
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>emb|AJ879969.1| Gallus gallus partial mRNA for immunoglobulin-like receptor
           CHIR-Ig1-19 (CHIR-Ig1-19 gene)
          Length = 234

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 9   aacacggggaaggagaaggagg 30
           |||| |||||||||||||||||
Sbjct: 112 aacaaggggaaggagaaggagg 133
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 73233 ggggaaggagaaggaggt 73216
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>gb|AC155718.4| Mus musculus 10 BAC RP24-217J7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 155643

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 3     caacaaaacacggggaaggagaagga 28
             ||||||| || |||||||||||||||
Sbjct: 77995 caacaaagcagggggaaggagaagga 77970
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>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03,
             complete sequence
          Length = 175555

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    cggggaaggagaaggagg 30
             ||||||||||||||||||
Sbjct: 60415 cggggaaggagaaggagg 60398
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>gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chromosome 7, complete
             sequence
          Length = 186886

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 79960 ggggaaggagaaggaggt 79977
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>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence
          Length = 163065

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 11    cacggggaaggagaagga 28
             ||||||||||||||||||
Sbjct: 63624 cacggggaaggagaagga 63607
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>gb|AC122144.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0011L09, complete sequence
          Length = 121055

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 13    cggggaaggagaaggagg 30
             ||||||||||||||||||
Sbjct: 57729 cggggaaggagaaggagg 57712
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>gb|DQ298186.1| Oryza sativa (japonica cultivar-group) WRKY transcription factor 82
           mRNA, complete cds
          Length = 2098

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 12  acggggaaggagaaggag 29
           ||||||||||||||||||
Sbjct: 191 acggggaaggagaaggag 208
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>gb|AC092388.5| Oryza sativa chromosome 10 BAC OSJNBa0011L09 genomic sequence,
            complete sequence
          Length = 177565

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 13   cggggaaggagaaggagg 30
            ||||||||||||||||||
Sbjct: 2272 cggggaaggagaaggagg 2289
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>gb|AC098588.3| Homo sapiens BAC clone RP11-291L15 from 4, complete sequence
          Length = 214945

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     ggggaaggagaaggaggt 31
              ||||||||||||||||||
Sbjct: 127120 ggggaaggagaaggaggt 127137
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>gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence
          Length = 169462

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 11     cacggggaaggagaagga 28
              ||||||||||||||||||
Sbjct: 145975 cacggggaaggagaagga 145958
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 14       ggggaaggagaaggaggt 31
                ||||||||||||||||||
Sbjct: 24952648 ggggaaggagaaggaggt 24952631



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 13       cggggaaggagaaggagg 30
                ||||||||||||||||||
Sbjct: 13846756 cggggaaggagaaggagg 13846739
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 10       acacggggaaggagaagg 27
                ||||||||||||||||||
Sbjct: 14053646 acacggggaaggagaagg 14053629



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 13       cggggaaggagaaggagg 30
                ||||||||||||||||||
Sbjct: 12761290 cggggaaggagaaggagg 12761273
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 13       cggggaaggagaaggagg 30
                ||||||||||||||||||
Sbjct: 20515607 cggggaaggagaaggagg 20515624



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 11       cacggggaaggagaagga 28
                ||||||||||||||||||
Sbjct: 11187703 cacggggaaggagaagga 11187720
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 14       ggggaaggagaaggaggt 31
                ||||||||||||||||||
Sbjct: 27063818 ggggaaggagaaggaggt 27063801



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 12       acggggaaggagaaggag 29
                ||||||||||||||||||
Sbjct: 10633008 acggggaaggagaaggag 10632991
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 13       cggggaaggagaaggagg 30
                ||||||||||||||||||
Sbjct: 19015279 cggggaaggagaaggagg 19015262
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 12      acggggaaggagaaggag 29
               ||||||||||||||||||
Sbjct: 5282050 acggggaaggagaaggag 5282033
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>emb|BX663529.7| Chicken DNA sequence from clone WAG-19H9, complete sequence
          Length = 133037

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 9      aacacggggaaggagaaggagg 30
              |||| |||||||||||||||||
Sbjct: 110031 aacaaggggaaggagaaggagg 110010
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>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete
             sequence
          Length = 217260

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 42887 ggggaaggagaaggaggt 42870
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    cggggaaggagaaggagg 30
             ||||||||||||||||||
Sbjct: 33254 cggggaaggagaaggagg 33271
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>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0042H24
          Length = 186313

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    cacggggaaggagaagga 28
             ||||||||||||||||||
Sbjct: 22875 cacggggaaggagaagga 22892
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>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0004P20
          Length = 160410

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     cacggggaaggagaagga 28
              ||||||||||||||||||
Sbjct: 146510 cacggggaaggagaagga 146527
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 12   acggggaaggagaaggag 29
            ||||||||||||||||||
Sbjct: 8353 acggggaaggagaaggag 8336
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 10    acacggggaaggagaagg 27
             ||||||||||||||||||
Sbjct: 69775 acacggggaaggagaagg 69758
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>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 34905 ggggaaggagaaggaggt 34888
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>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F05
          Length = 134247

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 12    acggggaaggagaaggag 29
             ||||||||||||||||||
Sbjct: 60648 acggggaaggagaaggag 60631
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>dbj|AK073491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042N14, full
           insert sequence
          Length = 1229

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 12  acggggaaggagaaggag 29
           ||||||||||||||||||
Sbjct: 254 acggggaaggagaaggag 271
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
           insert sequence
          Length = 3160

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 12  acggggaaggagaaggag 29
           ||||||||||||||||||
Sbjct: 481 acggggaaggagaaggag 498
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>dbj|AK065335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H01, full
           insert sequence
          Length = 1724

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 11  cacggggaaggagaagga 28
           ||||||||||||||||||
Sbjct: 400 cacggggaaggagaagga 383
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>emb|CR388011.14| Zebrafish DNA sequence from clone CH211-135J15 in linkage group 19,
             complete sequence
          Length = 163300

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 15    gggaaggagaaggaggtc 32
             ||||||||||||||||||
Sbjct: 21094 gggaaggagaaggaggtc 21111
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>dbj|AK061996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C11,
          full insert sequence
          Length = 1415

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 11 cacggggaaggagaagga 28
          ||||||||||||||||||
Sbjct: 50 cacggggaaggagaagga 33
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 14    ggggaaggagaaggaggt 31
             ||||||||||||||||||
Sbjct: 80911 ggggaaggagaaggaggt 80894
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 10       acacggggaaggagaagg 27
                ||||||||||||||||||
Sbjct: 14061888 acacggggaaggagaagg 14061871



 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 13       cggggaaggagaaggagg 30
                ||||||||||||||||||
Sbjct: 12768630 cggggaaggagaaggagg 12768613
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>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete
             sequence
          Length = 230193

 Score = 36.2 bits (18), Expect = 2.9
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 15    gggaaggagaaggaggtc 32
             ||||||||||||||||||
Sbjct: 28315 gggaaggagaaggaggtc 28332


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 505,270
Number of Sequences: 3902068
Number of extensions: 505270
Number of successful extensions: 191565
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 190989
Number of HSP's gapped (non-prelim): 576
length of query: 33
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 13
effective length of database: 17,155,003,908
effective search space: 223015050804
effective search space used: 223015050804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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