>MTF1_FLAOK (P14871) Modification methylase FokI (EC 2.1.1.72)|
           (Adenine-specific methyltransferase FokI) (M.FokI)
          Length = 647

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
 Frame = +2

Query: 29  NIDNGSQLNDCDDPSPPEHGPDPETQAFYDLLRDADVPLWNGCE--------LSKLSFLV 184
           +I N S+L       P  +  + E +  ++     +   + GCE         S++ F+ 
Sbjct: 70  SIPNFSELKKIGIKEPLHYLENEEFEISHEFFLTHNYSPYMGCERMYFTVENASRIDFIR 129

Query: 185 LLFNIKSTNKWSNKS-INDL-----LAVLQQAIPNGNNLPGTFAE-----AKKIIGKLGL 331
           L     + N+W N+S IN+L     LA+L +A+P  +N+ GT+        K+ +GKL L
Sbjct: 130 L-----TLNRWKNESLINELEFAYLLAILIEAVPFISNISGTYGAYLKHWDKRALGKLKL 184

>CBLC_HUMAN (Q9ULV8) Signal transduction protein CBL-C (SH3-binding protein|
           CBL-C) (CBL-3) (RING finger protein 57)
          Length = 474

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 338 ERIHVCEKDCQLFWKEKATDDFCSVCGAS 424
           +RIHV E+  QL+W   +T + C +C  S
Sbjct: 329 QRIHVSEEQLQLYWAMDSTFELCKICAES 357

>APN1_CAEEL (Q10002) DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18)|
           (AP endonuclease) (Apurinic-apyrimidinic endonuclease)
          Length = 396

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +2

Query: 236 DLLAVLQQAIPNGNNLPGTFAEAKKIIGKLGLSYERIHVCEKDCQLF 376
           +++ VL+     GN++ GTF E K II K+ +   R+ VC   C +F
Sbjct: 255 NIILVLETMAGQGNSIGGTFEELKFIIDKVKVK-SRVGVCIDTCHIF 300

>PESC_YEAST (P53261) Pescadillo homolog (Nucleolar protein 7)|
          Length = 605

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 22/78 (28%), Positives = 34/78 (43%)
 Frame = +2

Query: 26  GNIDNGSQLNDCDDPSPPEHGPDPETQAFYDLLRDADVPLWNGCELSKLSFLVLLFNIKS 205
           G + +  +L +  D    +H       +F D +RD D           L+ L L  N+ S
Sbjct: 97  GEVSSAKRLEENRDSYTLDHIIKERYPSFPDAIRDID---------DALNMLFLFSNLPS 147

Query: 206 TNKWSNKSINDLLAVLQQ 259
           TN+ S+K IND   +  Q
Sbjct: 148 TNQVSSKIINDAQKICNQ 165

>HIS8_SULSO (O33770) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 376

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
 Frame = +2

Query: 77  PEHGPDPETQA-FYDLLRDADVPLWNGCELSKLSFL-------VLLFNIKSTNKWSNKSI 232
           P  G D   +A FY+L+   D  L N    S  S         V+  N+K  N+W  ++ 
Sbjct: 104 PSVGADGSIRAIFYNLVEPGDTILTNYPSYSMYSVYSSVRGTKVIKVNLKEDNEWWKENT 163

Query: 233 NDLLAVLQQA----IPNGNNLPGT--FAEAKKIIGKL 325
           +DLLA  ++     I + NN  G+      K++IG+L
Sbjct: 164 DDLLAQAEKVELVIIDDPNNPTGSPMLNGKKELIGQL 200

>RL3R1_HUMAN (Q9NSD7) Relaxin-3 receptor 1 (RLN3 receptor 1) (Relaxin family|
           peptide receptor 3) (Somatostatin- and angiotensin-like
           peptide receptor) (G protein-coupled receptor SALPR)
           (GPCR135)
          Length = 469

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
 Frame = +2

Query: 65  DPSPPEHGP------DPETQAFYDLLRDADVPLWNGCELSKLSFLVLLFNIKSTNKWSNK 226
           D +PP H P        +T+A   +L    V  W  C L     L++L+ +KS   W   
Sbjct: 58  DGAPPGHPPGSGGAESADTEARVRIL--ISVVYWVVCALGLAGNLLVLYLMKSMQGWRKS 115

Query: 227 SIN 235
           SIN
Sbjct: 116 SIN 118

>PYRF_LACPL (P77888) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 237

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 275 NNLPGTFAEAKKIIGKLGLSYERIH 349
           +++P T   A ++IG+LG++Y  +H
Sbjct: 64  HDIPNTVESAMRVIGRLGVTYTTVH 88

>VL1_HPV08 (P06417) Major capsid protein L1|
          Length = 514

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  VHDVFGNIDNGSQLNDCDDPSPPEHGPDP 97
           +HD +  ID  S    C D SPP+  PDP
Sbjct: 429 IHDTYRYID--SLATRCPDKSPPKEKPDP 455


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,244,835
Number of Sequences: 219361
Number of extensions: 1282234
Number of successful extensions: 3543
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3543
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)