>gb|BT009347.1| Triticum aestivum clone wlm96.pk0001.b7:fis, full insert mRNA
           sequence
          Length = 2214

 Score =  133 bits (67), Expect = 3e-28
 Identities = 132/153 (86%), Gaps = 8/153 (5%)
 Strand = Plus / Plus

                                                                       
Query: 91  tccaatcccatcccatcgcgcagacaggcaggc-------cgcccgccaccgcgcgc-at 142
           |||||||||||||||| |||||| |||||||||       || ||||| |||||||| | 
Sbjct: 29  tccaatcccatcccattgcgcaggcaggcaggcaggccgccgaccgccgccgcgcgcgag 88

                                                                       
Query: 143 atcggaggcctccatcacgaaccccgggctccgcacccggaggcggtgaccggtgtgtat 202
           |||||| ||||||| ||||| |||| ||||||||| |||||||||| |||||||| || |
Sbjct: 89  atcggacgcctccaccacgaccccccggctccgcagccggaggcggcgaccggtgcgtgt 148

                                            
Query: 203 ttggcaggtaggctcgccggggcgatatgagcg 235
           |||||||||||||||||||||||||||||||||
Sbjct: 149 ttggcaggtaggctcgccggggcgatatgagcg 181

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 211      taggctcgccggggcgatatgagcg 235
                ||||||||||||||||| |||||||
Sbjct: 13567353 taggctcgccggggcgagatgagcg 13567329

>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0005A11, from chromosome 3, complete sequence
          Length = 168219

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 211    taggctcgccggggcgatatgagcg 235
              ||||||||||||||||| |||||||
Sbjct: 127244 taggctcgccggggcgagatgagcg 127220

>gb|AF367600.1| Merxmuellera disticha internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence
          Length = 597

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 117 ggcaggccgcccgccaccgcgcgca 141
           ||||||||| |||||||||||||||
Sbjct: 190 ggcaggccgaccgccaccgcgcgca 166

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 211      taggctcgccggggcgatatgagcg 235
                ||||||||||||||||| |||||||
Sbjct: 13563228 taggctcgccggggcgagatgagcg 13563204

>ref|XM_474316.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  ctccgcctcgccgagtccaa 95
           ||||||||||||||||||||
Sbjct: 193 ctccgcctcgccgagtccaa 212

>ref|XM_473310.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 609

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  ctccctcccgatctgtctga 39
           ||||||||||||||||||||
Sbjct: 364 ctccctcccgatctgtctga 383

>ref|XM_426433.1| PREDICTED: Gallus gallus similar to Butyrate response factor 1
           (TIS11B protein) (EGF-inducible protein CMG1)
           (LOC428877), mRNA
          Length = 1326

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 121 ggccgcccgccaccgcgcgc 140
           ||||||||||||||||||||
Sbjct: 877 ggccgcccgccaccgcgcgc 858

>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
              complete sequence
          Length = 159894

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     ctccgcctcgccgagtccaa 95
              ||||||||||||||||||||
Sbjct: 145780 ctccgcctcgccgagtccaa 145761

>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11,
             complete sequence
          Length = 113677

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    ctccctcccgatctgtctga 39
             ||||||||||||||||||||
Sbjct: 87504 ctccctcccgatctgtctga 87523

>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
             complete sequence
          Length = 164943

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ctccgcctcgccgagtccaa 95
             ||||||||||||||||||||
Sbjct: 40191 ctccgcctcgccgagtccaa 40172

>gb|AC158645.6| Mus musculus 6 BAC RP23-435I16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 177739

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    actctcgcacgcacgcacac 67
             ||||||||||||||||||||
Sbjct: 70004 actctcgcacgcacgcacac 70023

>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and
             metalloelastase gene, partial cds
          Length = 81826

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    cgcacgcacgcacacccgcc 72
             ||||||||||||||||||||
Sbjct: 60689 cgcacgcacgcacacccgcc 60708

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 76       ctccgcctcgccgagtccaa 95
                ||||||||||||||||||||
Sbjct: 34422706 ctccgcctcgccgagtccaa 34422687



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 20       ctccctcccgatctgtctga 39
                ||||||||||||||||||||
Sbjct: 26695691 ctccctcccgatctgtctga 26695672

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 20       ctccctcccgatctgtctga 39
                ||||||||||||||||||||
Sbjct: 16630140 ctccctcccgatctgtctga 16630121

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      ctccctcccgatctgtctga 39
               ||||||||||||||||||||
Sbjct: 1223988 ctccctcccgatctgtctga 1223969

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 117     ggcaggccgcccgccaccgcgcgc 140
               ||||| ||||||||||||||||||
Sbjct: 2240950 ggcagcccgcccgccaccgcgcgc 2240973

>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0542E10
          Length = 146196

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ctccctcccgatctgtctga 39
             ||||||||||||||||||||
Sbjct: 75941 ctccctcccgatctgtctga 75922

>dbj|AP005628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1014_E02
          Length = 159669

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ctccctcccgatctgtctga 39
              ||||||||||||||||||||
Sbjct: 101964 ctccctcccgatctgtctga 101945

>dbj|AP005464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1027A11
          Length = 169506

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   ctccctcccgatctgtctga 39
            ||||||||||||||||||||
Sbjct: 6050 ctccctcccgatctgtctga 6031

>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210862

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     cgcacgcacgcacacccgcc 72
              ||||||||||||||||||||
Sbjct: 148601 cgcacgcacgcacacccgcc 148620

>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete
             sequence
          Length = 138387

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ctccgcctcgccgagtccaa 95
             ||||||||||||||||||||
Sbjct: 43923 ctccgcctcgccgagtccaa 43904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,329,530
Number of Sequences: 3902068
Number of extensions: 1329530
Number of successful extensions: 39389
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39175
Number of HSP's gapped (non-prelim): 212
length of query: 235
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 213
effective length of database: 17,147,199,772
effective search space: 3652353551436
effective search space used: 3652353551436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)