>SN1L1_MOUSE (Q60670) Serine/threonine-protein kinase SNF1-like kinase 1 (EC|
           2.7.11.1) (Serine/threonine-protein kinase SNF1LK)
           (HRT-20) (Myocardial SNF1-like kinase)
          Length = 779

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 23/72 (31%), Positives = 29/72 (40%)
 Frame = +1

Query: 4   STSRSQTCSHSNKQQSAMASIPCTIQLVIKTASSSSGWRSPRAAQGGLRTPQLGGGAAWL 183
           ST R  T +  +   S + + PC I     TAS S G  S             G G+   
Sbjct: 469 STGRRHTLAEVSTHFSPL-NPPCIIVSSSATASPSEGTSSDSCLPFSASEGPAGLGSGLA 527

Query: 184 RPSLLSTVAPVR 219
            P LL T +PVR
Sbjct: 528 TPGLLGTSSPVR 539

>PDLI5_RAT (Q62920) PDZ and LIM domain protein 5 (Enigma homolog) (Enigma-like|
           PDZ and LIM domains protein)
          Length = 591

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 242 KNPTLPLSLTGATVLNSDGRSHAAPPPSCGVLSPP*AARG 123
           K  ++P   +  T  ++   SHA+PPP   V  PP +A G
Sbjct: 139 KVTSIPSPSSAFTPAHAATSSHASPPPVAAVTPPPLSASG 178

>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 4    STSRSQTCSHSNKQQSAMASIPCTIQLVIKTASSSS 111
            S+S S +CSHS    S+ +S  C+      ++SSSS
Sbjct: 2149 SSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSS 2184

>PDE4_CAEEL (Q22000) Probable 3',5'-cyclic phosphodiesterase pde-4 (EC|
           3.1.4.17)
          Length = 674

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
 Frame = +1

Query: 13  RSQTCSHSNKQQSAMASIPCTIQLVI------KTASSSSGWRSPRAA-----QGGLRTPQ 159
           R+ + S S+  ++  A++P     V       K  SS+S +  PR         G  T  
Sbjct: 39  RTSSPSASSTSRTPPAALPPRTSAVTIPGSNHKLTSSASSYHPPRELTVSTFSAGSATAA 98

Query: 160 LGGGAAWLRPSLLSTVAPVRES 225
            G G A L PSL S+V   RES
Sbjct: 99  DGLGGAHLTPSLSSSVHARRES 120

>RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A (hHR23A)|
          Length = 363

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 170 PPPSCGVLSPP*AARGDLHPDDEDAVLITSWMVHG 66
           P P+ G+  PP AAR D  P +E A   +   V G
Sbjct: 105 PAPTSGMSHPPPAAREDKSPSEESAPTTSPESVSG 139

>CD5R2_MOUSE (O35926) Cyclin-dependent kinase 5 activator 2 precursor (CDK5|
           activator 2) (Cyclin-dependent kinase 5 regulatory
           subunit 2) (P39) (P39I)
          Length = 369

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -1

Query: 236 PTLPLSLTGATVLNSDGRSHAAPPPSCGVLSPP 138
           PT+P   T AT     G S AAPPP  G   PP
Sbjct: 126 PTVPT--TAATCEPPSGGSAAAPPPGSGGGKPP 156

>BTUB_PHOPR (Q6LLU3) Vitamin B12 transporter btuB precursor (Cobalamin|
           receptor) (Outer membrane cobalamin translocator)
          Length = 606

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 88  IKTASSSSGWRSPRAAQGGLRTPQLGGGAAWLRPSLLSTVAPVRESGR 231
           IKT  + + W++      GL   +LGGG  W R S+ +T     E  R
Sbjct: 300 IKTERTVANWQNHYQLTDGL---ELGGGLEWYRDSVSNTGTQYAEDER 344


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.126    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,443,018
Number of Sequences: 219361
Number of extensions: 433210
Number of successful extensions: 1980
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)