Clone Name | bastl40c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ABI1_HUMAN (Q8IZP0) Abl interactor 1 (Abelson interactor 1) (Abi... | 29 | 2.8 | 2 | RAVR1_HUMAN (Q8IY67) Protein raver-1 | 29 | 3.7 |
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>ABI1_HUMAN (Q8IZP0) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin| SH3 domain-binding protein 1) (Eps8 SH3 domain-binding protein) (Eps8-binding protein) (e3B1) (Nap1-binding protein) (Nap1BP) (Abl-binding protein 4) (AblBP4) Length = 507 Score = 29.3 bits (64), Expect = 2.8 Identities = 16/55 (29%), Positives = 24/55 (43%) Frame = -3 Query: 251 SSSPRTPLTSFSSLGGARTWXXXXXXXXXRPLLVARPSPASLGRRIVSTPTASAA 87 +S + P T S GG+ + P+ V PSP ++G +S P S A Sbjct: 229 ASLNQRPRTHSGSSGGSGSRENSGSSSIGIPIAVPTPSPPTIGPENISVPPPSGA 283
>RAVR1_HUMAN (Q8IY67) Protein raver-1| Length = 606 Score = 28.9 bits (63), Expect = 3.7 Identities = 15/28 (53%), Positives = 15/28 (53%) Frame = -3 Query: 161 PLLVARPSPASLGRRIVSTPTASAATRR 78 P RPSPA STP ASAAT R Sbjct: 576 PTCCPRPSPAQKAAMWASTPRASAATTR 603 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,315,935 Number of Sequences: 219361 Number of extensions: 244987 Number of successful extensions: 921 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 921 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)