>ref|NM_187551.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3219

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Plus

                                                                       
Query: 81  cggcggagggcgcacaccgccgacgaggcagcggcggtgctgcggaaggcatggtgccgg 140
           ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 31  cggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccgg 90

                                                                       
Query: 141 ctgcgcctgtcggcgcgcgacccggcgcgggtcccgccgtgggacgccgtcgtgctcacg 200
           ||||| || |||||||| || ||| ||||||| |||||||||||||||||||| ||||| 
Sbjct: 91  ctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcacc 150

                                  
Query: 201 gccgccagccccgagcaggccgc 223
           || ||||||||||||||||||||
Sbjct: 151 gcggccagccccgagcaggccgc 173



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 289 tcgccgtcccggaccccgacggcgcccgcatcggctccggcgccgcca 336
           |||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 239 tcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgcca 286

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                          
Query: 81     cggcggagggcgcacaccgccgacgaggcagcggcggtgctgcggaaggcatggtgccgg 140
              ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 835438 cggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccgg 835379

                                                                          
Query: 141    ctgcgcctgtcggcgcgcgacccggcgcgggtcccgccgtgggacgccgtcgtgctcacg 200
              ||||| || |||||||| || ||| ||||||| |||||||||||||||||||| ||||| 
Sbjct: 835378 ctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcacc 835319

                                     
Query: 201    gccgccagccccgagcaggccgc 223
              || ||||||||||||||||||||
Sbjct: 835318 gcggccagccccgagcaggccgc 835296



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 289    tcgccgtcccggaccccgacggcgcccgcatcggctccggcgccgcca 336
              |||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 835230 tcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgcca 835183

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                          
Query: 81     cggcggagggcgcacaccgccgacgaggcagcggcggtgctgcggaaggcatggtgccgg 140
              ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 835436 cggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccgg 835377

                                                                          
Query: 141    ctgcgcctgtcggcgcgcgacccggcgcgggtcccgccgtgggacgccgtcgtgctcacg 200
              ||||| || |||||||| || ||| ||||||| |||||||||||||||||||| ||||| 
Sbjct: 835376 ctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcacc 835317

                                     
Query: 201    gccgccagccccgagcaggccgc 223
              || ||||||||||||||||||||
Sbjct: 835316 gcggccagccccgagcaggccgc 835294



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 289    tcgccgtcccggaccccgacggcgcccgcatcggctccggcgccgcca 336
              |||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 835228 tcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgcca 835181

>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10,
              complete sequence
          Length = 162132

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Minus

                                                                          
Query: 81     cggcggagggcgcacaccgccgacgaggcagcggcggtgctgcggaaggcatggtgccgg 140
              ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 130983 cggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccgg 130924

                                                                          
Query: 141    ctgcgcctgtcggcgcgcgacccggcgcgggtcccgccgtgggacgccgtcgtgctcacg 200
              ||||| || |||||||| || ||| ||||||| |||||||||||||||||||| ||||| 
Sbjct: 130923 ctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcacc 130864

                                     
Query: 201    gccgccagccccgagcaggccgc 223
              || ||||||||||||||||||||
Sbjct: 130863 gcggccagccccgagcaggccgc 130841



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 289    tcgccgtcccggaccccgacggcgcccgcatcggctccggcgccgcca 336
              |||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 130775 tcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgcca 130728

>dbj|AK121101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069I12, full
           insert sequence
          Length = 3399

 Score =  180 bits (91), Expect = 2e-42
 Identities = 130/143 (90%)
 Strand = Plus / Plus

                                                                       
Query: 81  cggcggagggcgcacaccgccgacgaggcagcggcggtgctgcggaaggcatggtgccgg 140
           ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 55  cggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccgg 114

                                                                       
Query: 141 ctgcgcctgtcggcgcgcgacccggcgcgggtcccgccgtgggacgccgtcgtgctcacg 200
           ||||| || |||||||| || ||| ||||||| |||||||||||||||||||| ||||| 
Sbjct: 115 ctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcacc 174

                                  
Query: 201 gccgccagccccgagcaggccgc 223
           || ||||||||||||||||||||
Sbjct: 175 gcggccagccccgagcaggccgc 197



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 289 tcgccgtcccggaccccgacggcgcccgcatcggctccggcgccgcca 336
           |||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 263 tcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgcca 310

>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence
          Length = 105215

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 118    tgctgcggaaggcatggtgccggctgcg 145
              ||||| ||||||||||||||||||||||
Sbjct: 100758 tgctgtggaaggcatggtgccggctgcg 100785

>ref|XM_552620.1| Anopheles gambiae str. PEST ENSANGP00000028761 (ENSANGG00000021791),
            partial mRNA
          Length = 2040

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 197  cacggccgccagccccgagcaggc 220
            ||||||||||||||||||||||||
Sbjct: 1041 cacggccgccagccccgagcaggc 1018

>ref|XM_723656.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07783)
           partial mRNA
          Length = 675

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 305 cgacggcgcccgcatcggctcc 326
           ||||||||||||||||||||||
Sbjct: 556 cgacggcgcccgcatcggctcc 535

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 312     gcccgcatcggctccggcgccg 333
               ||||||||||||||||||||||
Sbjct: 3790345 gcccgcatcggctccggcgccg 3790366

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 305     cgacggcgcccgcatcggctcc 326
               ||||||||||||||||||||||
Sbjct: 2801075 cgacggcgcccgcatcggctcc 2801096

>gb|AE004640.1| Pseudomonas aeruginosa PAO1, section 201 of 529 of the complete
            genome
          Length = 13345

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 65   gccaggccatcgccgccggcg 85
            |||||||||||||||||||||
Sbjct: 2754 gccaggccatcgccgccggcg 2774

>gb|AF092918.1|AF092918 Pseudomonas alcaligenes outer membrane Xcp-secretion system gene
             cluster
          Length = 20758

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 145   gcctgtcggcgcgcgacccggcgcgggtc 173
             |||||||||||||||||| ||||| ||||
Sbjct: 11814 gcctgtcggcgcgcgacctggcgctggtc 11842

>ref|XM_479707.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2236

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 cgtcccggaccccgacggcg 312
           ||||||||||||||||||||
Sbjct: 318 cgtcccggaccccgacggcg 337

>ref|XM_466824.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  accggcagcgcgcggggagg 49
           ||||||||||||||||||||
Sbjct: 161 accggcagcgcgcggggagg 180

>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ccgtcgtgctcacggccgcc 206
              ||||||||||||||||||||
Sbjct: 148772 ccgtcgtgctcacggccgcc 148753

>ref|XM_883305.1| PREDICTED: Bos taurus hypothetical protein LOC618179 (LOC618179),
           partial mRNA
          Length = 871

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 ggcgcgcgacccggcgcggg 171
           ||||||||||||||||||||
Sbjct: 754 ggcgcgcgacccggcgcggg 773

>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence
          Length = 203574

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 152    ggcgcgcgacccggcgcgggtccc 175
              |||||||| |||||||||||||||
Sbjct: 138924 ggcgcgcggcccggcgcgggtccc 138901

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    cctgtcggcgcgcgacccggcgcg 169
              ||||||||||||||| ||||||||
Sbjct: 302612 cctgtcggcgcgcgagccggcgcg 302635

>ref|XM_324048.1| Neurospora crassa OR74A predicted protein (NCU04692.1) partial mRNA
          Length = 5781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  cggcgcccgcatcggctccg 327
            ||||||||||||||||||||
Sbjct: 4148 cggcgcccgcatcggctccg 4167

>ref|XM_955037.1| Neurospora crassa OR74A hypothetical protein (NCU04692.1) partial
            mRNA
          Length = 5781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 308  cggcgcccgcatcggctccg 327
            ||||||||||||||||||||
Sbjct: 4148 cggcgcccgcatcggctccg 4167

>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12
          Length = 333800

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   cgcccgcatcggctccggcg 330
             ||||||||||||||||||||
Sbjct: 15078 cgcccgcatcggctccggcg 15097

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     ccgcatcggctccggcgccg 333
               ||||||||||||||||||||
Sbjct: 2424143 ccgcatcggctccggcgccg 2424124

>gb|AY305867.1| Oryza sativa (japonica cultivar-group) C2H2 type zinc finger
           transcription factor ZFP21 (ZFP21) mRNA, complete cds
          Length = 382

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 187 ccgtcgtgctcacggccgcc 206
           ||||||||||||||||||||
Sbjct: 298 ccgtcgtgctcacggccgcc 317

>emb|BX024285.1|CNS08QWH Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA37AB10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 635

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 gacccggcgcgggtcccgcc 178
           ||||||||||||||||||||
Sbjct: 612 gacccggcgcgggtcccgcc 593

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 101     cgacgaggcagcggcggtgc 120
               ||||||||||||||||||||
Sbjct: 5187386 cgacgaggcagcggcggtgc 5187367

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 307     acggcgcccgcatcggctcc 326
               ||||||||||||||||||||
Sbjct: 1650655 acggcgcccgcatcggctcc 1650674

>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     gggcgcacaccgccgacgag 107
              ||||||||||||||||||||
Sbjct: 258541 gggcgcacaccgccgacgag 258560

>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    ggccgccagccccgagcaggccgc 223
              |||||||||||||| |||||||||
Sbjct: 256723 ggccgccagccccgcgcaggccgc 256700

>gb|AF359557.1|AF359557 Pseudomonas syringae pv. maculicola plasmid pFKN, complete sequence
          Length = 39554

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    gccaggccatcgccgccggc 84
             ||||||||||||||||||||
Sbjct: 38561 gccaggccatcgccgccggc 38580

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 187      ccgtcgtgctcacggccgcc 206
                ||||||||||||||||||||
Sbjct: 18506342 ccgtcgtgctcacggccgcc 18506323

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 293    cgtcccggaccccgacggcg 312
              ||||||||||||||||||||
Sbjct: 365501 cgtcccggaccccgacggcg 365520

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 30       accggcagcgcgcggggagg 49
                ||||||||||||||||||||
Sbjct: 24895007 accggcagcgcgcggggagg 24895026

>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1215B07
          Length = 165957

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    accggcagcgcgcggggagg 49
             ||||||||||||||||||||
Sbjct: 56290 accggcagcgcgcggggagg 56309

>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0450B04
          Length = 153268

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   cgtcccggaccccgacggcg 312
             ||||||||||||||||||||
Sbjct: 75015 cgtcccggaccccgacggcg 75034

>dbj|AK119294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-E03, full
           insert sequence
          Length = 2236

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 cgtcccggaccccgacggcg 312
           ||||||||||||||||||||
Sbjct: 318 cgtcccggaccccgacggcg 337

>ref|NM_207845.1| Eremothecium gossypii AAL050Wp (AAL050W), mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ggccgccagccccgagcaggccgc 223
           |||||||||||||| |||||||||
Sbjct: 234 ggccgccagccccgcgcaggccgc 211

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 304     ccgacggcgcccgcatcggc 323
               ||||||||||||||||||||
Sbjct: 4602616 ccgacggcgcccgcatcggc 4602635

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     cggcgcgcgacccggcgcgg 170
               ||||||||||||||||||||
Sbjct: 2099627 cggcgcgcgacccggcgcgg 2099608


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,602,971
Number of Sequences: 3902068
Number of extensions: 1602971
Number of successful extensions: 39074
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38217
Number of HSP's gapped (non-prelim): 857
length of query: 336
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 314
effective length of database: 17,147,199,772
effective search space: 5384220728408
effective search space used: 5384220728408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)