ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TILS_PROMM (Q7V987) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 32 0.76
2D1IP_HUMAN (Q9NYX4) D1 dopamine receptor-interacting protein cal... 28 8.4

>TILS_PROMM (Q7V987) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 343

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 27  IPTRSHLTWLWLEPASRPSAPAMREEVRSSSAAPADPP 140
           I  R+ L   WL+ +  PS PA++ E  S S AP  PP
Sbjct: 282 ITARTTLLAYWLKRSGAPSLPAVQLEQISQSIAPGKPP 319



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>D1IP_HUMAN (Q9NYX4) D1 dopamine receptor-interacting protein calcyon|
          Length = 217

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 30  PTRSHLTWLWLEPASRPSAPAMREEVRSSSAAPADPP 140
           PT++       EP  +PSA A +E  R ++ + A PP
Sbjct: 179 PTQAGAAAAATEPPGKPSAKAEKEAARKAAGSAAPPP 215


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,617,171
Number of Sequences: 219361
Number of extensions: 858351
Number of successful extensions: 2691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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