ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476650.1| Oryza sativa (japonica cultivar-group), mRNA 305 7e-80
2dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 7e-80
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
4dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
5dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
7gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 82 2e-12
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
9ref|NM_101582.2| Arabidopsis thaliana unknown protein AT1G17210 ... 44 0.39
10gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 geno... 44 0.39
11gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e ... 44 0.39
12gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.6
13gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complet... 42 1.6
14emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.6
15gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.6
16gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
17dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.6
18gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 6.1
19ref|XM_508471.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 6.1
20emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.1
21gb|BC077719.1| Homo sapiens von Willebrand factor C and EGF doma... 40 6.1
22gb|BC052564.1| Homo sapiens von Willebrand factor C and EGF doma... 40 6.1
23gb|BC042143.1| Homo sapiens von Willebrand factor C and EGF doma... 40 6.1
24gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene clust... 40 6.1
25gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, com... 40 6.1
26dbj|AK056571.1| Homo sapiens cDNA FLJ32009 fis, clone NT2RP70094... 40 6.1
27gb|AE012049.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.1
28gb|AF499022.1| Baboon herpesvirus 2 strain OU1-76 terminase gene... 40 6.1
29gb|AF499021.1| Cercopithecine herpesvirus 2 strain B264 terminas... 40 6.1
30gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park... 40 6.1
31gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, com... 40 6.1
32ref|NM_152718.1| Homo sapiens von Willebrand factor C and EGF do... 40 6.1
33gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.1
34gb|AY205235.1| Homo sapiens URG11 mRNA, complete cds 40 6.1
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
36gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the ... 40 6.1
37gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 6.1
38dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.1 
>ref|XM_476650.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3250

 Score =  305 bits (154), Expect = 7e-80
 Identities = 314/366 (85%), Gaps = 1/366 (0%)
 Strand = Plus / Plus

                                                                       
Query: 88  ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 147
           |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 67  ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 126

                                                                       
Query: 148 cagactcgccgcccgccaccccggtcgccagttctgccggtgcttcatctcctcccgcgc 207
           | | |||||||||||||||||| ||||||||||| || ||||| ||||| || || || |
Sbjct: 127 cggcctcgccgcccgccacccccgtcgccagttcggctggtgcatcatcaccacctgcac 186

                                                                       
Query: 208 aaacaaatgtagctaccatagattggttaggcagtgggcagttatctaaagttgggtcat 267
           ||||||||| ||||| |||||||||||||||  ||| ||   |||| ||||| |  ||||
Sbjct: 187 aaacaaatgcagctagcatagattggttaggtggtgagccaatatccaaagtggaatcat 246

                                                                       
Query: 268 cgccccatgttgcttcacatgctgctcaaccttctcttagtactaatgctgttggagctg 327
           |  ||||  ||||| |||||||| |||  |||||||||||||||||||||| ||||||||
Sbjct: 247 catcccagattgctccacatgctcctcggccttctcttagtactaatgctgctggagctg 306

                                                                       
Query: 328 ctatggatttctcacaaccatcatgtagaccatgggaacgaggagatttacttcatcgac 387
           |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||  ||||
Sbjct: 307 ccgtggatttctctcaaccatcttgtagaccatgggaacgaggagacttgcttcggcgac 366

                                                                       
Query: 388 tggccacatttaagccttcaacatgggcttctaaacc-aaggctgctagttcactggcct 446
           |||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 367 tggccacattcaagtcttcaacatgggcttctaagccaaaggctgctagttcactggctt 426

                 
Query: 447 gtgctc 452
           ||||||
Sbjct: 427 gtgctc 432
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>dbj|AK073749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M17, full
           insert sequence
          Length = 3250

 Score =  305 bits (154), Expect = 7e-80
 Identities = 314/366 (85%), Gaps = 1/366 (0%)
 Strand = Plus / Plus

                                                                       
Query: 88  ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 147
           |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 67  ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 126

                                                                       
Query: 148 cagactcgccgcccgccaccccggtcgccagttctgccggtgcttcatctcctcccgcgc 207
           | | |||||||||||||||||| ||||||||||| || ||||| ||||| || || || |
Sbjct: 127 cggcctcgccgcccgccacccccgtcgccagttcggctggtgcatcatcaccacctgcac 186

                                                                       
Query: 208 aaacaaatgtagctaccatagattggttaggcagtgggcagttatctaaagttgggtcat 267
           ||||||||| ||||| |||||||||||||||  ||| ||   |||| ||||| |  ||||
Sbjct: 187 aaacaaatgcagctagcatagattggttaggtggtgagccaatatccaaagtggaatcat 246

                                                                       
Query: 268 cgccccatgttgcttcacatgctgctcaaccttctcttagtactaatgctgttggagctg 327
           |  ||||  ||||| |||||||| |||  |||||||||||||||||||||| ||||||||
Sbjct: 247 catcccagattgctccacatgctcctcggccttctcttagtactaatgctgctggagctg 306

                                                                       
Query: 328 ctatggatttctcacaaccatcatgtagaccatgggaacgaggagatttacttcatcgac 387
           |  |||||||||| |||||||| ||||||||||||||||||||||| || ||||  ||||
Sbjct: 307 ccgtggatttctctcaaccatcttgtagaccatgggaacgaggagacttgcttcggcgac 366

                                                                       
Query: 388 tggccacatttaagccttcaacatgggcttctaaacc-aaggctgctagttcactggcct 446
           |||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 367 tggccacattcaagtcttcaacatgggcttctaagccaaaggctgctagttcactggctt 426

                 
Query: 447 gtgctc 452
           ||||||
Sbjct: 427 gtgctc 432
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  188 bits (95), Expect = 1e-44
 Identities = 212/251 (84%)
 Strand = Plus / Minus

                                                                           
Query: 176     cagttctgccggtgcttcatctcctcccgcgcaaacaaatgtagctaccatagattggtt 235
               |||||| || ||||| ||||| || || || |||||||||| ||||| ||||||||||||
Sbjct: 2671602 cagttcggctggtgcatcatcaccacctgcacaaacaaatgcagctagcatagattggtt 2671543

                                                                           
Query: 236     aggcagtgggcagttatctaaagttgggtcatcgccccatgttgcttcacatgctgctca 295
               |||  ||| ||   |||| ||||| |  |||||  ||||  ||||| |||||||| ||| 
Sbjct: 2671542 aggtggtgagccaatatccaaagtggaatcatcatcccagattgctccacatgctcctcg 2671483

                                                                           
Query: 296     accttctcttagtactaatgctgttggagctgctatggatttctcacaaccatcatgtag 355
                |||||||||||||||||||||| |||||||||  |||||||||| |||||||| |||||
Sbjct: 2671482 gccttctcttagtactaatgctgctggagctgccgtggatttctctcaaccatcttgtag 2671423

                                                                           
Query: 356     accatgggaacgaggagatttacttcatcgactggccacatttaagccttcaacatgggc 415
               |||||||||||||||||| || ||||  |||||||||||||| ||| |||||||||||||
Sbjct: 2671422 accatgggaacgaggagacttgcttcggcgactggccacattcaagtcttcaacatgggc 2671363

                          
Query: 416     ttctaaaccaa 426
               |||||| ||||
Sbjct: 2671362 ttctaagccaa 2671352



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                           
Query: 88      ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 147
               |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 2672576 ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 2672517

                                              
Query: 148     cagactcgccgcccgccaccccggtcgccag 178
               | | |||||||||||||||||| ||||||||
Sbjct: 2672516 cggcctcgccgcccgccacccccgtcgccag 2672486



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 426     aggctgctagttcactggcctgtgctc 452
               ||||||||||||||||||| |||||||
Sbjct: 2670669 aggctgctagttcactggcttgtgctc 2670643
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>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1027_G06
          Length = 121885

 Score =  188 bits (95), Expect = 1e-44
 Identities = 212/251 (84%)
 Strand = Plus / Minus

                                                                         
Query: 176   cagttctgccggtgcttcatctcctcccgcgcaaacaaatgtagctaccatagattggtt 235
             |||||| || ||||| ||||| || || || |||||||||| ||||| ||||||||||||
Sbjct: 97320 cagttcggctggtgcatcatcaccacctgcacaaacaaatgcagctagcatagattggtt 97261

                                                                         
Query: 236   aggcagtgggcagttatctaaagttgggtcatcgccccatgttgcttcacatgctgctca 295
             |||  ||| ||   |||| ||||| |  |||||  ||||  ||||| |||||||| ||| 
Sbjct: 97260 aggtggtgagccaatatccaaagtggaatcatcatcccagattgctccacatgctcctcg 97201

                                                                         
Query: 296   accttctcttagtactaatgctgttggagctgctatggatttctcacaaccatcatgtag 355
              |||||||||||||||||||||| |||||||||  |||||||||| |||||||| |||||
Sbjct: 97200 gccttctcttagtactaatgctgctggagctgccgtggatttctctcaaccatcttgtag 97141

                                                                         
Query: 356   accatgggaacgaggagatttacttcatcgactggccacatttaagccttcaacatgggc 415
             |||||||||||||||||| || ||||  |||||||||||||| ||| |||||||||||||
Sbjct: 97140 accatgggaacgaggagacttgcttcggcgactggccacattcaagtcttcaacatgggc 97081

                        
Query: 416   ttctaaaccaa 426
             |||||| ||||
Sbjct: 97080 ttctaagccaa 97070



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 80/91 (87%)
 Strand = Plus / Minus

                                                                         
Query: 88    ccgccatgagagaggaggtcaggagctcgtcggcggcgcccgcggacccgccgctgcgct 147
             |||||||| | ||||||||  |||||||||||||||||||  | |||||||||| |||||
Sbjct: 98294 ccgccatgcgcgaggaggtgcggagctcgtcggcggcgccgcccgacccgccgccgcgct 98235

                                            
Query: 148   cagactcgccgcccgccaccccggtcgccag 178
             | | |||||||||||||||||| ||||||||
Sbjct: 98234 cggcctcgccgcccgccacccccgtcgccag 98204



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 426   aggctgctagttcactggcctgtgctc 452
             ||||||||||||||||||| |||||||
Sbjct: 96387 aggctgctagttcactggcttgtgctc 96361
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>dbj|AK102218.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L08, full
           insert sequence
          Length = 3325

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 92/106 (86%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 348 tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 407
           |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 314 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 373

                                                         
Query: 408 acatgggcttctaaacc-aaggctgctagttcactggcctgtgctc 452
           || ||||||||||  || ||||||||||||||  |||| |||||||
Sbjct: 374 acttgggcttctaggcctaaggctgctagttctttggcttgtgctc 419
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 348      tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 407
                |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 32294054 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 32293995

                             
Query: 408      acatgggcttcta 420
                || ||||||||||
Sbjct: 32293994 acttgggcttcta 32293982
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>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 348   tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 407
             |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 27821 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 27762

                          
Query: 408   acatgggcttcta 420
             || ||||||||||
Sbjct: 27761 acttgggcttcta 27749
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 348      tcatgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttca 407
                |||||||| ||||||||||| ||||| ||||||| ||||||||| |||| ||||||| ||
Sbjct: 32384564 tcatgtaggccatgggaacgcggagacttacttcgtcgactggcaacatataagcctaca 32384505

                             
Query: 408      acatgggcttcta 420
                || ||||||||||
Sbjct: 32384504 acttgggcttcta 32384492
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>ref|NM_101582.2| Arabidopsis thaliana unknown protein AT1G17210 mRNA, complete cds
          Length = 3348

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 351 tgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttcaa 408
           |||||| |||||||  |||||||||||||||  || || ||||| || ||||||||||
Sbjct: 340 tgtagaacatgggatagaggagatttacttcgacgtcttgccactttcaagccttcaa 397
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>gb|AC007651.2| Arabidopsis thaliana chromosome I BAC F20D23 genomic sequence, complete
             sequence
          Length = 114935

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                       
Query: 351   tgtagaccatgggaacgaggagatttacttcatcgactggccacatttaagccttcaa 408
             |||||| |||||||  |||||||||||||||  || || ||||| || ||||||||||
Sbjct: 39231 tgtagaacatgggatagaggagatttacttcgacgtcttgccactttcaagccttcaa 39288
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>gb|AC000078.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 33e In DGCR Region,
             complete sequence
          Length = 44426

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 42    cacctcacctggctctggctgg 63
             ||||||||||||||||||||||
Sbjct: 23380 cacctcacctggctctggctgg 23401
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 68      cgcatcgaggccgagcgcgcccgcc 92
               ||||||||| |||||||||||||||
Sbjct: 2952801 cgcatcgagcccgagcgcgcccgcc 2952777
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>gb|AC005105.3| Homo sapiens BAC clone CTA-491N20 from 7, complete sequence
          Length = 177206

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    tgagagaggaggtcaggagct 114
             |||||||||||||||||||||
Sbjct: 52952 tgagagaggaggtcaggagct 52932
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 68      cgcatcgaggccgagcgcgcccgcc 92
               ||||||||| |||||||||||||||
Sbjct: 1131404 cgcatcgagcccgagcgcgcccgcc 1131380
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 68     cgcatcgaggccgagcgcgcccgcc 92
              ||||||||| |||||||||||||||
Sbjct: 725999 cgcatcgagcccgagcgcgcccgcc 725975
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 119     ggcggcgcccgcggacccgccgctg 143
               |||||||||||||||| ||||||||
Sbjct: 3234636 ggcggcgcccgcggacgcgccgctg 3234660



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 72      tcgaggccgagcgcgcccgc 91
               ||||||||||||||||||||
Sbjct: 2151670 tcgaggccgagcgcgcccgc 2151689
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 118     cggcggcgcccgcggacccgccgctgcgc 146
               ||||||||||| |||||| ||||||||||
Sbjct: 3525958 cggcggcgccctcggaccggccgctgcgc 3525930
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aggagctcgtcggcggcgcc 127
             ||||||||||||||||||||
Sbjct: 33502 aggagctcgtcggcggcgcc 33483
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>ref|XM_508471.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ32009
            (LOC451233), mRNA
          Length = 3439

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 3072 gccggtgcttcatctcctcc 3091
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 152     ctcgccgcccgccaccccggtcgc 175
               |||||||| |||||||||||||||
Sbjct: 4700670 ctcgccgcacgccaccccggtcgc 4700693
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>gb|BC077719.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:6305035), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
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>gb|BC052564.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:6305411), complete cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
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>gb|BC042143.1| Homo sapiens von Willebrand factor C and EGF domains, mRNA (cDNA
            clone IMAGE:5930956), partial cds
          Length = 3385

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 2490 gccggtgcttcatctcctcc 2509
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>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence
          Length = 31310

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   cggcgcccgcggacccgccg 140
             ||||||||||||||||||||
Sbjct: 26728 cggcgcccgcggacccgccg 26747
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>gb|AC090195.5| Homo sapiens chromosome 8, clone RP11-366K18, complete sequence
          Length = 121721

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   cacctcacctggctctggct 61
            ||||||||||||||||||||
Sbjct: 7566 cacctcacctggctctggct 7547
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>dbj|AK056571.1| Homo sapiens cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar to
            FIBULIN-1, ISOFORM A PRECURSOR
          Length = 3292

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 2416 gccggtgcttcatctcctcc 2435
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>gb|AE012049.1| Xanthomonas axonopodis pv. citri str. 306,  section 427 of 469 of the
            complete genome
          Length = 10499

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 152  ctcgccgcccgccaccccggtcgc 175
            |||||||| |||||||||||||||
Sbjct: 8052 ctcgccgcacgccaccccggtcgc 8075
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>gb|AF499022.1| Baboon herpesvirus 2 strain OU1-76 terminase gene, partial cds
          Length = 363

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 aggagctcgtcggcggcgcc 127
           ||||||||||||||||||||
Sbjct: 65  aggagctcgtcggcggcgcc 46
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>gb|AF499021.1| Cercopithecine herpesvirus 2 strain B264 terminase gene, partial
           cds
          Length = 363

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 108 aggagctcgtcggcggcgcc 127
           ||||||||||||||||||||
Sbjct: 65  aggagctcgtcggcggcgcc 46
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>gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 182247

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    aaacaaatgtagctaccata 227
              ||||||||||||||||||||
Sbjct: 122156 aaacaaatgtagctaccata 122137
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>gb|AC084082.5| Homo sapiens chromosome 8, clone RP11-220B24, complete sequence
          Length = 187204

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    cacctcacctggctctggct 61
             ||||||||||||||||||||
Sbjct: 13687 cacctcacctggctctggct 13706
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>ref|NM_152718.1| Homo sapiens von Willebrand factor C and EGF domains (VWCE), mRNA
          Length = 3292

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 2416 gccggtgcttcatctcctcc 2435
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     tcgaggccgagcgcgcccgc 91
              ||||||||||||||||||||
Sbjct: 122075 tcgaggccgagcgcgcccgc 122094
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>gb|AY205235.1| Homo sapiens URG11 mRNA, complete cds
          Length = 3076

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gccggtgcttcatctcctcc 202
            ||||||||||||||||||||
Sbjct: 2166 gccggtgcttcatctcctcc 2185
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     gctcgtcggcggcgcccgcg 131
               ||||||||||||||||||||
Sbjct: 2792255 gctcgtcggcggcgcccgcg 2792236



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     cggcggcgcccgcggacccg 137
               ||||||||||||||||||||
Sbjct: 2453693 cggcggcgcccgcggacccg 2453674
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>gb|AE004982.1| Halobacterium sp. NRC-1 section 13 of 170 of the complete genome
          Length = 13571

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    cgcatcgaggccgagcgcgc 87
             ||||||||||||||||||||
Sbjct: 11958 cgcatcgaggccgagcgcgc 11939
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   aggagctcgtcggcggcgcc 127
             ||||||||||||||||||||
Sbjct: 34678 aggagctcgtcggcggcgcc 34659
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>dbj|AP003037.2| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2331C18, complete
             sequences
          Length = 121567

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   gccggtgcttcatctcctcc 202
             ||||||||||||||||||||
Sbjct: 39149 gccggtgcttcatctcctcc 39130


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,015,361
Number of Sequences: 3902068
Number of extensions: 4015361
Number of successful extensions: 72142
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70796
Number of HSP's gapped (non-prelim): 1343
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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