ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl40c08 |
|---|---|
| Clone Library Name | barley_pub |
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 56.6 bits (135), Expect = 3e-08 Identities = 35/66 (53%), Positives = 39/66 (59%), Gaps = 12/66 (18%) Frame = +1 Query: 253 RGGRERGLCFASLG---------GRPSRRTVRSKAPVGALAERVVLTSAPAER---VARP 396 RGG G+CFAS+ G RRT RS APVGAL ERVV+ AP E+ RP Sbjct: 2 RGGA--GMCFASMEAAGSRGMGKGASRRRTARSTAPVGALVERVVVAPAPVEQQRGAGRP 59 Query: 397 EAHPQS 414 EAHPQS Sbjct: 60 EAHPQS 65
>SLD3_SCHPO (Q09761) DNA replication regulator sld3| Length = 668 Score = 33.9 bits (76), Expect = 0.20 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Frame = -1 Query: 359 TTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMT 180 +++ R L++ L+ LP R K S PPR + ++ A + LP ++ G Sbjct: 406 SSKFPRITRNLLEKCNGLDLLPERSHKHR-HSAPPRSKLISSKSEAGRA-LPGNTSGASI 463 Query: 179 VERSSPPSSAQISK-VKIARRGRNGSG 102 SSP S A ISK +I +R R+ SG Sbjct: 464 SNTSSPHSEASISKDYEILKRRRSNSG 490
>MYO1F_HUMAN (O00160) Myosin If (Myosin-IE)| Length = 1098 Score = 33.1 bits (74), Expect = 0.34 Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 5/113 (4%) Frame = -1 Query: 407 GCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEG-----LPPRLAKQSPRSRPPRGAA 243 G A G+ S+ A TR+A AP +DR + LP + RPPRG Sbjct: 929 GMAKGKPRRSSQAP---TRAAPAPPRGMDRNGVPPSARGGPLPLEIMSGGGTHRPPRGP- 984 Query: 242 VLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQG 84 PS+S+G R+ PPS + + +G G R G Sbjct: 985 ------------PSTSLGASRRPRARPPSEHNTEFLNVPDQGMAGMQRKRSVG 1025
>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) Length = 582 Score = 31.6 bits (70), Expect = 0.99 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +3 Query: 51 QPSKIQSEKHIPLPGQPP*PISSPASDXXXXXXXXXXXXXSFYGHAADGAAGEILLAGGR 230 QPS+ ++ +P P P P SSPAS G+A AG+ +G Sbjct: 301 QPSRTENRDPLPNPWAPQTPQSSPASGSTGSTTNTVSTSA---GNATSTPAGQ-GTSGPN 356 Query: 231 LCQHRGAS--RRPGARALLRE 287 L GAS PG ++LL++ Sbjct: 357 LVPGAGASMFNTPGMQSLLQQ 377
>SURE_HAEDU (Q7VN28) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 253 Score = 31.2 bits (69), Expect = 1.3 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 7/70 (10%) Frame = -1 Query: 212 DLPSSSIGGMTVERSSPPS-SAQISKVKIARR------GRNGSGRLAGQGDMFLALDLGR 54 DLP S+I GM V R S SA+I K + R G NGS G+G F AL Sbjct: 171 DLPYSAIKGMLVTRLGQRSPSAEILKSQDPRGSTIYWLGENGSAIDNGEGTDFYALAHDY 230 Query: 53 LDRTPVAAPL 24 + TP+ A + Sbjct: 231 VSITPIHADM 240
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 31.2 bits (69), Expect = 1.3 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +1 Query: 301 PSRRTVRSKAP-VGALAERVVLTSAPAERVARPEAHPQS 414 PSRR+VRS +P G+ A RV +S+P R P H +S Sbjct: 93 PSRRSVRSPSPRQGSPARRVDRSSSPRARSPPPRRHSRS 131
>KKCC1_RAT (P97756) Calcium/calmodulin-dependent protein kinase kinase 1 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-kinase kinase alpha) (CaM-KK alpha) (CaMKK alpha) (alpha CaMKK) (CaMKK 1) (CaM-kinase IV kinase) Length = 505 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = +1 Query: 58 PRSRARNISPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQAAGSA 237 PR+RA ++ P ASRP P RP + + G L + P + G A Sbjct: 46 PRARAASVIPGSASRPTPVRPSLSARKFSLQERPAGSCLEAQVGP---------YSTGPA 96 Query: 238 STAAPRGGR 264 S +PR R Sbjct: 97 SHMSPRAWR 105
>KKCC1_MOUSE (Q8VBY2) Calcium/calmodulin-dependent protein kinase kinase 1 (EC| 2.7.11.17) (Calcium/calmodulin-dependent protein kinase kinase alpha) (CaM-kinase kinase alpha) (CaM-KK alpha) (CaMKK alpha) (CaMKK 1) (CaM-kinase IV kinase) Length = 505 Score = 31.2 bits (69), Expect = 1.3 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = +1 Query: 58 PRSRARNISPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQAAGSA 237 PR+RA ++ P ASRP P RP + + G L + P + G A Sbjct: 46 PRARAASVIPGSASRPTPVRPSLSARKFSLQERPAGSCLGAQVGP---------YSTGPA 96 Query: 238 STAAPRGGR 264 S +PR R Sbjct: 97 SHISPRSWR 105
>SYR_PSEPK (Q88CU1) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 578 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Frame = -1 Query: 314 VLLEGLPPRLAKQSPRSRPPRG-----AAVLAEPAACK-KDLPSSSIGGMTVERSSPPSS 153 VL EGL P + ++ R + A +LA+PA K +DL I + P+S Sbjct: 21 VLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINAL-------PAS 73 Query: 152 AQISKVKIARRG 117 A ISKV+IA G Sbjct: 74 ADISKVEIAGPG 85
>MUC1_XENLA (Q05049) Integumentary mucin C.1 (FIM-C.1) (Fragment)| Length = 662 Score = 30.8 bits (68), Expect = 1.7 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = -1 Query: 401 ASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAA 222 A+G+A +A A TT +A APT A + P + S+ P AA A Sbjct: 78 AAGKAPTTAAATAPTTAAAGAPTTATGKAPATAAAP---VPTTAASKAPTTAAAATHSTA 134 Query: 221 CKKDLPSSSIGGMTVERSSPPSS-AQISKVKIARRGRNGS 105 +++ + ERS+ SS + VK ++R GS Sbjct: 135 AAAAPTTAASAAKSKERSTSSSSEEEHCHVKPSKREMCGS 174
>MEFV_HUMAN (O15553) Pyrin (Marenostrin)| Length = 781 Score = 30.4 bits (67), Expect = 2.2 Identities = 40/137 (29%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Frame = +1 Query: 10 STKEN----RGAATGVRSNRPRSRARNISPCPASRPDPFRPRRAILTLLICAD-EGGELL 174 ST+EN A++ + N+PRS P P RP L C+ E G L Sbjct: 95 STQENGTDDSAASSSLGENKPRSLKTPDHPEGNEGNGP-RPYGGGAASLRCSQPEAGRGL 153 Query: 175 STV-MPPMELLGRSFLQAAGSASTAAPR--GGRERGLCFASLGGRPSRRTVRSKAPVGAL 345 S + L A G T +P GGR G C A GG+ R R+ + G L Sbjct: 154 SRKPLSKRREKASEGLDAQGKPRTRSPALPGGRSPGPCRALEGGQAEVRLRRNASSAGRL 213 Query: 346 AERVVLTSAPAERVARP 396 + + AP ++ RP Sbjct: 214 --QGLAGGAPGQKECRP 228
>MAZ_MOUSE (P56671) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) Length = 477 Score = 30.0 bits (66), Expect = 2.9 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = -1 Query: 401 ASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGL-----PPRLAKQSPRSRPPRGAAVL 237 A+ A +A A V T A A +D L + PP ++ + + PP AA + Sbjct: 97 AAAAAAAAAAAAVVTAPPAPAAASTVDTAALKQPPAPPPPPPAVSAPAAEAAPPAAAATI 156 Query: 236 AEPAACKKDLPSSSI 192 A AA P+S++ Sbjct: 157 AAAAATAVVAPTSTV 171
>MAZ_MESAU (P56670) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (Fragment) Length = 331 Score = 30.0 bits (66), Expect = 2.9 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = -1 Query: 401 ASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGL-----PPRLAKQSPRSRPPRGAAVL 237 A+ A +A A V T A A +D L + PP ++ + + PP AA + Sbjct: 84 AAAAAAAAAAAAVVTAPPAPAAASTVDTAALKQPPAPPPPPPAVSAPAAEAAPPAAAATI 143 Query: 236 AEPAACKKDLPSSSI 192 A AA P+S++ Sbjct: 144 AAAAATAVVAPTSTV 158
>SPHK2_HUMAN (Q9NRA0) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)| Length = 654 Score = 30.0 bits (66), Expect = 2.9 Identities = 26/85 (30%), Positives = 35/85 (41%) Frame = -1 Query: 347 ARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERS 168 AR P AL T+ + L + + P +RP G LAE + C T+ Sbjct: 60 ARGPRFAL--TLTSQALHIQRLRPKPEARPRGGLVPLAEVSGC-----------CTLRSR 106 Query: 167 SPPSSAQISKVKIARRGRNGSGRLA 93 SP SA + RGR G+ R A Sbjct: 107 SPSDSAAYFCIYTYPRGRRGARRRA 131
>TCP10_HUMAN (Q12799) T-complex protein 10A homolog| Length = 416 Score = 30.0 bits (66), Expect = 2.9 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Frame = +1 Query: 46 RSNRPRSRARNISPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQA 225 R P R ++ SP P RP P RR + +++G + + P GR Sbjct: 186 REKSPPGRRQDRSPAPTGRPTPGAERRGV------SEDGKIMHPSSRSPQNSGGRKSPVQ 239 Query: 226 AGSAS-----TAAPRGG-RERGLCFASLGGRPSR 309 A A+ TAA RG R + +S GG SR Sbjct: 240 ASQATTLQEQTAAARGADRSSSVLGSSEGGFLSR 273
>THIE_YERPE (Q8ZAQ1) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 215 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -1 Query: 293 PRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER 171 P KQ P S P+G A L+ D P+ +IGG+++ER Sbjct: 133 PTQTKQMPSS--PQGLASLSRQVKNTPDYPTVAIGGISIER 171
>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 30.0 bits (66), Expect = 2.9 Identities = 37/136 (27%), Positives = 48/136 (35%) Frame = +1 Query: 7 GSTKENRGAATGVRSNRPRSRARNISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 186 G + GAAT + +P PAS P P RP GG LL Sbjct: 250 GGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRP-------------GGGLLP--- 293 Query: 187 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVVLT 366 P +L +L+ A+ A E AS GR R + + P ALA Sbjct: 294 PGARIL--EYLEGVREANLAKTLERPEPPAGMASPPGRSPHRLPKDQRPKSALA------ 345 Query: 367 SAPAERVARPEAHPQS 414 A + A P PQ+ Sbjct: 346 GASKRKRANPRPRPQT 361
>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1371 Score = 29.6 bits (65), Expect = 3.8 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 9/93 (9%) Frame = -1 Query: 311 LLEGLPPRLAKQSPRSRPPRGAAVLAE---------PAACKKDLPSSSIGGMTVERSSPP 159 L+ GL LA SPRS PP A + + LP + G + S Sbjct: 935 LMSGLGTGLAAASPRSSPPPLPAKASRQLQVYRSKMDSDAASPLPRTRSGPLPSSSGSSS 994 Query: 158 SSAQISKVKIARRGRNGSGRLAGQGDMFLALDL 60 SS+Q+S + R S LA G L +L Sbjct: 995 SSSQLSVATLGRSPSPKSALLAQNGTSSLPRNL 1027
>THIE_SALTY (Q9L9I8) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 211 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%) Frame = -1 Query: 293 PRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER------SSPPSSAQISKVK 132 P KQ P + P+G A LA D P+ +IGG+++ER + S A +S + Sbjct: 133 PTQTKQMPSA--PQGLAQLASHIERLADYPTVAIGGISLERAPAVLATGVGSIAVVSAIT 190 Query: 131 IARRGRNGSGRL---AGQGD 81 A R + L AG GD Sbjct: 191 QAADWREATAELLAIAGVGD 210
>PHYK2_ORYSA (Q5N9J9) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) (Fragment) Length = 296 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -1 Query: 308 LEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLP 204 L LP + P+SRPP A A+C DLP Sbjct: 1 LLSLPSSAPRSRPQSRPPLSPPAAAAAASCSFDLP 35
>H1C2_XENLA (P15867) Histone H1C (Clone XLHW8)| Length = 220 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -1 Query: 248 AAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLA 93 AA AEP KK P + GG ++ S PS++++ ++ G LA Sbjct: 11 AAPPAEPKQKKKQQPKKAAGGAKAKKPSGPSASELIVKSVSASKERGGVSLA 62
>THIE_SALTI (Q8Z325) Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP| pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 211 Score = 29.3 bits (64), Expect = 4.9 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%) Frame = -1 Query: 293 PRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER------SSPPSSAQISKVK 132 P KQ P + P+G A LA D P+ +IGG+++ER + S A +S + Sbjct: 133 PTQTKQMPSA--PQGLAQLARHIERLADYPTVAIGGISLERAPAVLATGVGSIAVVSAIT 190 Query: 131 IARRGRNGSGRL---AGQGD 81 A R + +L AG GD Sbjct: 191 QAADWRAATAQLLAIAGVGD 210
>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 609 Score = 29.3 bits (64), Expect = 4.9 Identities = 24/82 (29%), Positives = 34/82 (41%) Frame = +1 Query: 82 SPCPASRPDPFRPRRAILTLLICADEGGELLSTVMPPMELLGRSFLQAAGSASTAAPRGG 261 +P PAS P P +P+ +S PP G S L GS P G Sbjct: 129 APAPASAPPPSKPQN---------------ISAPPPPSMNRGASKLFGGGSV-VNTPGGS 172 Query: 262 RERGLCFASLGGRPSRRTVRSK 327 + + + ASL S+ TVR++ Sbjct: 173 QSKVVPIASLNPYQSKWTVRAR 194
>MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (ZF87) (ZIF87) Length = 477 Score = 28.9 bits (63), Expect = 6.4 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 5/95 (5%) Frame = -1 Query: 401 ASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGL-----PPRLAKQSPRSRPPRGAAVL 237 A+ A +A A V A A +D L + PP ++ + + PP AA + Sbjct: 97 AAAAAAAAAAAAVAAAPPAPAAASTVDTAALKQPPAPPPPPPPVSAPAAEAAPPASAATI 156 Query: 236 AEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVK 132 A AA P+S++ +P +SA K K Sbjct: 157 AAAAATAVVAPTSTVA------VAPVASALEKKTK 185
>TYPH_BURPS (Q63IV6) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 440 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 15/70 (21%) Frame = +1 Query: 241 TAAPRGGRERGLCFA------SLGG-----RPSRRTVRSKAPVGALAER----VVLTSAP 375 T A R R + FA ++GG +RR +R+ GA AER V P Sbjct: 265 TGAARPARLEAVSFALAAQMLTMGGLAADAHDARRRLRAVLESGAAAERFARMVAALGGP 324 Query: 376 AERVARPEAH 405 A+ V RPE H Sbjct: 325 ADLVERPERH 334
>TYPH_BURMA (Q62EC5) Thymidine phosphorylase (EC 2.4.2.4) (TdRPase)| Length = 440 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 15/70 (21%) Frame = +1 Query: 241 TAAPRGGRERGLCFA------SLGG-----RPSRRTVRSKAPVGALAER----VVLTSAP 375 T A R R + FA ++GG +RR +R+ GA AER V P Sbjct: 265 TGAARPARLEAVSFALAAQMLTMGGLAADAHDARRRLRAVLESGAAAERFARMVAALGGP 324 Query: 376 AERVARPEAH 405 A+ V RPE H Sbjct: 325 ADLVERPERH 334
>SEM6A_HUMAN (Q9H2E6) Semaphorin-6A precursor (Semaphorin VIA) (Sema VIA)| (Semaphorin 6A-1) (SEMA6A-1) Length = 1030 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -1 Query: 350 SARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVER 171 S+++P ++ L+ LPP++ ++ PP GA++ + + ++ SS G+ +R Sbjct: 860 SSKSPNHGVNLVENLDSLPPKVPQREASLGPP-GASLSQTGLSKRLEMHHSSSYGVDYKR 918 Query: 170 SSPPSS 153 S P +S Sbjct: 919 SYPTNS 924
>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.9 bits (63), Expect = 6.4 Identities = 37/136 (27%), Positives = 48/136 (35%) Frame = +1 Query: 7 GSTKENRGAATGVRSNRPRSRARNISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 186 G + GAAT + +P PAS P P RP GG LL Sbjct: 250 GGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRP-------------GGGLLP--- 293 Query: 187 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVVLT 366 P +L +L+ A+ A E AS GR R + + P ALA Sbjct: 294 PGARIL--EYLEGVREANLAKTLERPEPPAGMASPPGRSPHRLPKDQRPKSALA------ 345 Query: 367 SAPAERVARPEAHPQS 414 A + A P PQ+ Sbjct: 346 GASKRKRANPRPIPQT 361
>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa| immediate-early protein) Length = 1487 Score = 28.9 bits (63), Expect = 6.4 Identities = 37/136 (27%), Positives = 48/136 (35%) Frame = +1 Query: 7 GSTKENRGAATGVRSNRPRSRARNISPCPASRPDPFRPRRAILTLLICADEGGELLSTVM 186 G + GAAT + +P PAS P P RP GG LL Sbjct: 250 GGDRPAAGAATPKSCRSGAASPGAPAPAPASAPAPSRP-------------GGGLLP--- 293 Query: 187 PPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAERVVLT 366 P +L +L+ A+ A E AS GR R + + P ALA Sbjct: 294 PGARIL--EYLEGVREANLAKTLERPEPPAGMASPPGRSPHRLPKDQRPKSALA------ 345 Query: 367 SAPAERVARPEAHPQS 414 A + A P PQ+ Sbjct: 346 GASKRKRANPRPIPQT 361
>DBP_RAT (P16443) D site-binding protein (Albumin D box-binding protein)| (Albumin D-element-binding protein) (D site albumin promoter-binding protein 1) Length = 325 Score = 28.9 bits (63), Expect = 6.4 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 19/93 (20%) Frame = -1 Query: 311 LLEGLPPRLAKQSPRSRPPRGAAVLA------------EPAAC-------KKDLPSSSIG 189 L + P L P PP G A+L EPA+C K LPS+ + Sbjct: 5 LSDRTPGPLLLGGPAGAPPGGGALLGLRSLLQGNSKPKEPASCLLKEKERKATLPSAPVP 64 Query: 188 GMTVERSSPPSSAQISKVKIARRGRNGSGRLAG 90 G +E ++ P+ A V R SG +AG Sbjct: 65 GPVLE-TAGPADAPTGAVSGGGSPRGRSGPVAG 96
>ODPA_BACST (P21873) Pyruvate dehydrogenase E1 component, alpha subunit (EC| 1.2.4.1) Length = 368 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 181 VMPPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGG 297 V+PP ++G ++QAAG A RG + + + GG Sbjct: 137 VLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGG 175
>PRGR_RABIT (P06186) Progesterone receptor (PR)| Length = 930 Score = 28.5 bits (62), Expect = 8.4 Identities = 26/72 (36%), Positives = 31/72 (43%) Frame = -1 Query: 389 ATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEPAACKKD 210 A +A RT A A A L PP L + P SRP AAV A P + Sbjct: 392 AAEAAARSPRTYLVAGANPAAFPDFQLAAPPPPSLPPRVPSSRPGE-AAVAASPGSA--S 448 Query: 209 LPSSSIGGMTVE 174 + SSS G T+E Sbjct: 449 VSSSSSSGSTLE 460
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.5 bits (62), Expect = 8.4 Identities = 42/139 (30%), Positives = 51/139 (36%), Gaps = 5/139 (3%) Frame = +1 Query: 7 GSTKENRGAA--TGVRSNRPRS---RARNISPCPASRPDPFRPRRAILTLLICADEGGEL 171 GS +RG + TGVR PR RAR P ++ P RR+ D G E Sbjct: 208 GSPVAHRGTSLGTGVRDPAPRGGRGRARTPGPVHSAAGGPGSRRRSPGA---ARDPGPE- 263 Query: 172 LSTVMPPMELLGRSFLQAAGSASTAAPRGGRERGLCFASLGGRPSRRTVRSKAPVGALAE 351 P E G GS A G R+ G A + RP RR S G Sbjct: 264 ------PGEERGGGGKPPLGSPR--ATDGNRDPG---AGVPARPGRRMGGSSGGRGGTPG 312 Query: 352 RVVLTSAPAERVARPEAHP 408 R +AP R P+ P Sbjct: 313 RGPERAAPGARPTAPDGAP 331
>PER_DROSC (P91705) Period circadian protein (Fragment)| Length = 375 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 215 KDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQGDM 78 K L + + GGM SSA +SK + + G GSG + G G++ Sbjct: 194 KQLLTLNTGGMPPLLDIHTSSASLSKCQASGAGGGGSGSVGGTGNI 239
>PER_DROCP (P91607) Period circadian protein (Fragment)| Length = 375 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 215 KDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQGDM 78 K L + + GGM SSA +SK + + G GSG + G G++ Sbjct: 194 KQLLTLNTGGMPPLLDIHTSSASLSKCQASGAGGGGSGSVGGTGNI 239
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/47 (27%), Positives = 22/47 (46%) Frame = -1 Query: 278 QSPRSRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISK 138 + P+ P V + A K D+PSS + E+++PP +K Sbjct: 701 KQPKMVKPTTDLVSSSSATTKPDIPSSKVQSQAEEKTTPPLKTDSAK 747
>YNE1_CAEEL (P30640) Hypothetical protein R08D7.1| Length = 458 Score = 28.5 bits (62), Expect = 8.4 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Frame = -1 Query: 296 PPRLAKQSPRSR-------PPRGAAVLAEPAACKKDLPSS--SIGGMTVE--RSSPPSSA 150 PPR SP R PPR + + EP KK+ P S G T+E RS S+ Sbjct: 207 PPRRRPSSPARRRKDDDLSPPRKSRKIEEPKKIKKEEPDSDTETSGRTLEGKRSGLQSAR 266 Query: 149 QISKVKIARRGRN 111 + + R +N Sbjct: 267 DLKEESDKLRAKN 279
>TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF-interacting protein)| Length = 3038 Score = 28.5 bits (62), Expect = 8.4 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 8/91 (8%) Frame = -1 Query: 266 SRPPRGAAVLAEPAACKKDLPSSSIGGMTVERSSPPSSAQISKVKIARRGRNGSGRLAGQ 87 S PP GAA A P+A + P + G ER + P I K+K+ R G+ +G Sbjct: 2316 SLPPPGAAPEAGPSAPSRRPPGADAEGS--EREAEP----IPKMKVLESPRKGAANASGS 2369 Query: 86 GDMFLALD----LGRL----DRTPVAAPLFS 18 A D LG L R A+PL S Sbjct: 2370 SPDAPAKDARASLGTLPLGKPRAGAASPLNS 2400
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 28.5 bits (62), Expect = 8.4 Identities = 23/70 (32%), Positives = 28/70 (40%) Frame = -1 Query: 407 GCASGRATLSAGAEVRTTRSARAPTGALDRTVLLEGLPPRLAKQSPRSRPPRGAAVLAEP 228 G G A L A AE++ + A A L P A + P RP AAV EP Sbjct: 156 GTCGGDALLFAPAELKMGTAFSAGAEAARGPGTGPPLSPAAALRPPGKRPAPPAAVATEP 215 Query: 227 AACKKDLPSS 198 A PS+ Sbjct: 216 PAKAAKAPSA 225
>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2| precursor (Endothelial and smooth muscle cell-derived neuropilin-like protein) Length = 769 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/47 (31%), Positives = 20/47 (42%) Frame = +1 Query: 28 GAATGVRSNRPRSRARNISPCPASRPDPFRPRRAILTLLICADEGGE 168 G A + R + P P R RPR +L LL+ D GG+ Sbjct: 18 GPAAPAATGRAALPSAGCCPLPPGRNSSSRPRLLLLLLLLLQDAGGQ 64 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.132 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,230,784 Number of Sequences: 219361 Number of extensions: 1076994 Number of successful extensions: 5157 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 4824 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5148 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
