Clone Name | bastl40c07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_190478.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2997 Score = 178 bits (90), Expect = 1e-41 Identities = 123/134 (91%) Strand = Plus / Plus Query: 260 tatggtttcgctgtgcggccacaacacttgcaacggtacagagagtatgccaacatctac 319 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 496 tatggattcgctgtgcggccacaacacttgcaacggtacagagagtatgcaaacatctac 555 Query: 320 caggaggaggaagaggggaggtctgatagatggaagaactttctggataggcaggcagag 379 ||||||||||||||| ||| ||||| ||||||||||| ||||||||||| || || ||| Sbjct: 556 aaggaggaggaagaggagagatctgagagatggaagaattttctggatagccaagctgag 615 Query: 380 gacgatgaatcatc 393 ||||||||||||| Sbjct: 616 tacgatgaatcatc 629
>dbj|AK065821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043G04, full insert sequence Length = 3034 Score = 168 bits (85), Expect = 1e-38 Identities = 151/173 (87%) Strand = Plus / Plus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgggacgcctatggt 265 ||||||||| | ||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 172 gagatgaagccgaagagcctcccgttcatcgccttcgagcacaagcgggatgcctatggc 231 Query: 266 ttcgctgtgcggccacaacacttgcaacggtacagagagtatgccaacatctaccaggag 325 ||||| || ||||| ||||||||||| || |||| |||||||| ||||||| ||||| Sbjct: 232 ttcgcagttcggccccaacacttgcagcgttacaaggagtatgcaggcatctacaaggag 291 Query: 326 gaggaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 |||||||||| ||| || |||||||||||||| |||||||| |||||| |||| Sbjct: 292 gaggaagaggagagatccgatagatggaagaattttctggagaggcagtcaga 344
>ref|XM_475386.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2493 Score = 163 bits (82), Expect = 6e-37 Identities = 148/170 (87%) Strand = Plus / Plus Query: 209 atgaaggccaagagcctccccttcatcgccttcgagcacaagcgggacgcctatggtttc 268 |||||| | ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 1 atgaagccgaagagcctcccgttcatcgccttcgagcacaagcgggatgcctatggcttc 60 Query: 269 gctgtgcggccacaacacttgcaacggtacagagagtatgccaacatctaccaggaggag 328 || || ||||| ||||||||||| || |||| |||||||| ||||||| |||||||| Sbjct: 61 gcagttcggccccaacacttgcagcgttacaaggagtatgcaggcatctacaaggaggag 120 Query: 329 gaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 ||||||| ||| || |||||||||||||| |||||||| |||||| |||| Sbjct: 121 gaagaggagagatccgatagatggaagaattttctggagaggcagtcaga 170
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 5e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 260 tatggtttcgctgtgcggccacaacacttgcaacggtacagagagtatgccaacatctac 319 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 35786087 tatggattcgctgtgcggccacaacacttgcaacggtacagagagtatgcaaacatctac 35786028 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 319 ccaggaggaggaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 ||||||||||||||||| ||| ||||| ||||||||||| ||||||||||| || || || Sbjct: 35785948 ccaggaggaggaagaggagagatctgagagatggaagaattttctggatagccaagctga 35785889 Query: 379 ggacgatgaatcatc 393 | ||||||||||||| Sbjct: 35785888 gtacgatgaatcatc 35785874 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgg 253 ||||||||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 35786714 gagatgaaggcgaagagcctcccgttcatcgcctcggagcacaagcgg 35786667
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 103 bits (52), Expect = 5e-19 Identities = 58/60 (96%) Strand = Plus / Minus Query: 260 tatggtttcgctgtgcggccacaacacttgcaacggtacagagagtatgccaacatctac 319 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 50545 tatggattcgctgtgcggccacaacacttgcaacggtacagagagtatgcaaacatctac 50486 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 319 ccaggaggaggaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 ||||||||||||||||| ||| ||||| ||||||||||| ||||||||||| || || || Sbjct: 50406 ccaggaggaggaagaggagagatctgagagatggaagaattttctggatagccaagctga 50347 Query: 379 ggacgatgaatcatc 393 | ||||||||||||| Sbjct: 50346 gtacgatgaatcatc 50332 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgg 253 ||||||||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 51172 gagatgaaggcgaagagcctcccgttcatcgcctcggagcacaagcgg 51125
>gb|AY022729.1| Oryza sativa microsatellite MRG5054 containing (CCG)X12, closest to marker S964, genomic sequence Length = 236 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgg 253 ||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 163 gagatgaagccgaagagcctcccgttcatcgccttcgagcacaagcgg 210
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgg 253 ||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 51894 gagatgaagccgaagagcctcccgttcatcgccttcgagcacaagcgg 51847 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 320 caggaggaggaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 |||||||||||||||| ||| || |||||||||||||| |||||||| |||||| |||| Sbjct: 51137 caggaggaggaagaggagagatccgatagatggaagaattttctggagaggcagtcaga 51079 Score = 44.1 bits (22), Expect = 0.40 Identities = 49/58 (84%) Strand = Plus / Minus Query: 252 gggacgcctatggtttcgctgtgcggccacaacacttgcaacggtacagagagtatgc 309 |||| |||||||| ||||| || ||||| ||||||||||| || |||| |||||||| Sbjct: 51290 gggatgcctatggcttcgcagttcggccccaacacttgcagcgttacaaggagtatgc 51233
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgg 253 ||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 6252 gagatgaagccgaagagcctcccgttcatcgccttcgagcacaagcgg 6205 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 320 caggaggaggaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 |||||||||||||||| ||| || |||||||||||||| |||||||| |||||| |||| Sbjct: 5495 caggaggaggaagaggagagatccgatagatggaagaattttctggagaggcagtcaga 5437 Score = 44.1 bits (22), Expect = 0.40 Identities = 49/58 (84%) Strand = Plus / Minus Query: 252 gggacgcctatggtttcgctgtgcggccacaacacttgcaacggtacagagagtatgc 309 |||| |||||||| ||||| || ||||| ||||||||||| || |||| |||||||| Sbjct: 5648 gggatgcctatggcttcgcagttcggccccaacacttgcagcgttacaaggagtatgc 5591
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 206 gagatgaaggccaagagcctccccttcatcgccttcgagcacaagcgg 253 ||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 22696695 gagatgaagccgaagagcctcccgttcatcgccttcgagcacaagcgg 22696648 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 320 caggaggaggaagaggggaggtctgatagatggaagaactttctggataggcaggcaga 378 |||||||||||||||| ||| || |||||||||||||| |||||||| |||||| |||| Sbjct: 22695938 caggaggaggaagaggagagatccgatagatggaagaattttctggagaggcagtcaga 22695880 Score = 44.1 bits (22), Expect = 0.40 Identities = 49/58 (84%) Strand = Plus / Minus Query: 252 gggacgcctatggtttcgctgtgcggccacaacacttgcaacggtacagagagtatgc 309 |||| |||||||| ||||| || ||||| ||||||||||| || |||| |||||||| Sbjct: 22696091 gggatgcctatggcttcgcagttcggccccaacacttgcagcgttacaaggagtatgc 22696034
>ref|XM_493851.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3145 Score = 46.1 bits (23), Expect = 0.10 Identities = 98/123 (79%) Strand = Plus / Plus Query: 238 cttcgagcacaagcgggacgcctatggtttcgctgtgcggccacaacacttgcaacggta 297 ||||||| ||||| ||||||| ||||| ||||| |||||||| || || |||| || | Sbjct: 30 cttcgagtacaagagggacgcgtatggattcgcggtgcggccgcagcatctgcagcgttt 89 Query: 298 cagagagtatgccaacatctaccaggaggaggaagaggggaggtctgatagatggaagaa 357 | | ||||||||||| || ||| |||| || ||||||| ||| | || ||||||||| | Sbjct: 90 ccgcgagtatgccaagatttacaaggaagaagaagaggagagagcggacagatggaagga 149 Query: 358 ctt 360 ||| Sbjct: 150 ctt 152
>ref|XM_320082.2| Anopheles gambiae str. PEST ENSANGP00000012260 (ENSANGG00000009771), partial mRNA Length = 4257 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 catcgccttcgagcacaagcgg 253 |||||||||||||||||||||| Sbjct: 3993 catcgccttcgagcacaagcgg 4014
>gb|AY607900.1| Gackstroemia weindorferi ATP synthase beta chain (atpB) gene, partial cds; chloroplast Length = 1108 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 gatgaatcatctgaagaagat 403 ||||||||||||||||||||| Sbjct: 890 gatgaatcatctgaagaagat 910
>gb|AC103610.9| Mus musculus chromosome 9, clone RP23-364M24, complete sequence Length = 205900 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggaggt 341 ||||||||||||||||||||| Sbjct: 148920 aggaggaggaagaggggaggt 148940
>gb|AC126438.3| Mus musculus BAC clone RP24-255G1 from chromosome 17, complete sequence Length = 152802 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 353 aagaactttctggataggcaggcag 377 |||||||| |||||||||||||||| Sbjct: 76274 aagaacttgctggataggcaggcag 76298
>gb|AC124534.4| Mus musculus BAC clone RP23-316G7 from chromosome 1, complete sequence Length = 177675 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggaggt 341 ||||||||||||||||||||| Sbjct: 56058 aggaggaggaagaggggaggt 56078
>gb|AC007161.1| Homo sapiens BAC clone GS1-165B14 from 7, complete sequence Length = 109343 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggaggt 341 ||||||||||||||||||||| Sbjct: 53813 aggaggaggaagaggggaggt 53833
>emb|AL391069.11| Human DNA sequence from clone RP11-126K1 on chromosome 1 Contains the 3' end of the PSMD4 gene for proteasome (prosome, macropain) 26S subunit non-ATPase 4, two novel genes, gene KIAA1441 (FLJ13043), the PIK4CB genen for phosphatidylinositol 4-kinase catalytic beta polypeptide, the RFX5 gene for regulatory factor X 5 (influences HLA class II expression), the SELENBP1 gene for selenium binding protein 1 and two CpG islands, complete sequence Length = 121357 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 caggaggaggaagaggggagg 340 ||||||||||||||||||||| Sbjct: 111123 caggaggaggaagaggggagg 111103
>gb|AC154569.2| Mus musculus BAC clone RP23-385I2 from chromosome 17, complete sequence Length = 180258 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggaggt 341 ||||||||||||||||||||| Sbjct: 25802 aggaggaggaagaggggaggt 25782
>dbj|AB182627.1| Klebsiella sp. PAMU-1.2 paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, MP genes, complete cds Length = 15036 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 59 ctaccctgaatcgcgctgcgctgca 83 ||||||||||||||| ||||||||| Sbjct: 1111 ctaccctgaatcgcggtgcgctgca 1135
>gb|AC161614.4| Pan troglodytes BAC clone CH251-575E11 from chromosome unknown, complete sequence Length = 172771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 caggaggaggaagaggggagg 340 ||||||||||||||||||||| Sbjct: 111410 caggaggaggaagaggggagg 111430
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 198 cgcggcgcgagatgaaggccaagag 222 |||||||||||||| |||||||||| Sbjct: 1608606 cgcggcgcgagatgcaggccaagag 1608630
>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence Length = 167248 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 121486 aggaggaggaagaggggagg 121467
>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence Length = 191747 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 14627 aggaggaggaagaggggagg 14646
>gb|AC166162.6| Mus musculus BAC clone RP23-436K10 from chromosome 6, complete sequence Length = 181038 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 179107 aggaggaggaagaggggagg 179126
>gb|AY790940.1| Homo sapiens insulin-like growth factor 1 (somatomedin C) (IGF1) gene, complete cds Length = 88577 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gccacaacacttgcaacggt 296 |||||||||||||||||||| Sbjct: 43458 gccacaacacttgcaacggt 43439
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 144839 aggaggaggaagaggggagg 144820
>gb|AC100427.25| Mus musculus chromosome 10, clone RP23-136J15, complete sequence Length = 206339 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 91204 aggaggaggaagaggggagg 91223
>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland Research Institute) complete sequence Length = 245677 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 100239 aggaggaggaagaggggagg 100220
>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence Length = 150909 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 130346 aggaggaggaagaggggagg 130365
>ref|XM_322131.1| Neurospora crassa OR74A hypothetical protein (NCU00046.1) partial mRNA Length = 2562 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cttcatcgccttcgagcaca 248 |||||||||||||||||||| Sbjct: 191 cttcatcgccttcgagcaca 210
>ref|XM_951064.1| Neurospora crassa OR74A hypothetical protein (NCU00046.1) partial mRNA Length = 2562 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cttcatcgccttcgagcaca 248 |||||||||||||||||||| Sbjct: 191 cttcatcgccttcgagcaca 210
>gb|AC101093.9| Mus musculus chromosome 3, clone RP23-90B11, complete sequence Length = 167727 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 147482 aggaggaggaagaggggagg 147501
>ref|XM_705703.1| Candida albicans SC5314 hypothetical protein (CaO19.3765), mRNA Length = 4182 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gaatcatctgaagaagatgc 405 |||||||||||||||||||| Sbjct: 874 gaatcatctgaagaagatgc 893
>ref|XM_705690.1| Candida albicans SC5314 hypothetical protein (CaO19.11249), mRNA Length = 4182 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gaatcatctgaagaagatgc 405 |||||||||||||||||||| Sbjct: 874 gaatcatctgaagaagatgc 893
>gb|AC124602.5| Mus musculus BAC clone RP23-37L7 from chromosome 7, complete sequence Length = 189065 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 181077 ctaccaggaggaggaagagg 181058
>gb|AC140333.2| Mus musculus BAC clone RP24-326A21 from chromosome 10, complete sequence Length = 157738 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 catctgaagaagatgctaag 409 |||||||||||||||||||| Sbjct: 112256 catctgaagaagatgctaag 112237
>gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, complete sequence Length = 181897 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 122704 aggaggaggaagaggggagg 122723
>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence Length = 234795 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 147747 aggaggaggaagaggggagg 147766
>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 166333 aggaggaggaagaggggagg 166314
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 9760 aggaggaggaagaggggagg 9779
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 12700813 aggaggaggaagaggggagg 12700832
>ref|XM_001000649.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 1 (Prss36), mRNA Length = 1334 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 464 ctaccaggaggaggaagagg 483
>ref|XM_001000660.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 2 (Prss36), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1751 ctaccaggaggaggaagagg 1770
>ref|XM_001000668.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 3 (Prss36), mRNA Length = 3062 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1784 ctaccaggaggaggaagagg 1803
>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence Length = 163348 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 54220 aggaggaggaagaggggagg 54201
>ref|XM_990161.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 1 (Prss36), mRNA Length = 1334 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 464 ctaccaggaggaggaagagg 483
>ref|XM_990188.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 2 (Prss36), mRNA Length = 3030 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1750 ctaccaggaggaggaagagg 1769
>ref|XM_990219.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 3 (Prss36), mRNA Length = 3061 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1783 ctaccaggaggaggaagagg 1802
>ref|XM_001004440.1| PREDICTED: Mus musculus protease, serine, 36, transcript variant 3 (Prss36), mRNA Length = 1334 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 464 ctaccaggaggaggaagagg 483
>ref|XM_620569.3| PREDICTED: Mus musculus protease, serine, 36, transcript variant 1 (Prss36), mRNA Length = 3030 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1750 ctaccaggaggaggaagagg 1769
>ref|XM_902328.2| PREDICTED: Mus musculus protease, serine, 36, transcript variant 2 (Prss36), mRNA Length = 3061 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1783 ctaccaggaggaggaagagg 1802
>gb|AC132237.3| Mus musculus BAC clone RP24-501M9 from chromosome 12, complete sequence Length = 212186 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 133025 aggaggaggaagaggggagg 133006
>gb|AC124461.3| Mus musculus BAC clone RP24-144C5 from chromosome 7, complete sequence Length = 185788 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 104676 ctaccaggaggaggaagagg 104657
>gb|AC140053.4| Mus musculus BAC clone RP23-258J2 from chromosome 19, complete sequence Length = 186595 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 107670 aggaggaggaagaggggagg 107651
>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence Length = 188476 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 82418 aggaggaggaagaggggagg 82437
>ref|XM_808667.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053511153.40) partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1273 ctaccaggaggaggaagagg 1292
>gb|AC129082.6| Mus musculus BAC clone RP24-324M11 from chromosome 8, complete sequence Length = 141671 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 81075 aggaggaggaagaggggagg 81056
>gb|AC124347.4| Mus musculus BAC clone RP24-462J14 from chromosome 19, complete sequence Length = 179915 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 37387 aggaggaggaagaggggagg 37406
>gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosome 9, complete sequence Length = 187995 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 103816 aggaggaggaagaggggagg 103835
>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence Length = 210148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 101047 aggaggaggaagaggggagg 101066 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 100916 aggaggaggaagaggggagg 100935
>emb|BX842591.2| Rhesus DNA sequence from clone bRH-242L13, complete sequence Length = 196103 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggaggaggaagaggggag 339 |||||||||||||||||||| Sbjct: 56598 caggaggaggaagaggggag 56617
>gb|AC112144.4| Mus musculus BAC clone RP23-32B4 from 19, complete sequence Length = 216521 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 190635 aggaggaggaagaggggagg 190654
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 catctgaagaagatgctaag 409 |||||||||||||||||||| Sbjct: 234859 catctgaagaagatgctaag 234878
>gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosome 9, complete sequence Length = 209835 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 144611 aggaggaggaagaggggagg 144630
>emb|AL355472.19| Human DNA sequence from clone RP5-827C21 on chromosome 1 Contains a ribosomal protein S15 (RPS15) pseudogene, three novel genes (LOC388753), the 3' end of the TARBP1 gene for TAR (HIV) RNA binding protein 1 and a CpG island, complete sequence Length = 92628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 69869 aggaggaggaagaggggagg 69888
>emb|AL049747.1|HS62D4 Human DNA sequence from clone CITF22-62D4 on chromosome 22, complete sequence Length = 40665 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 21998 aggaggaggaagaggggagg 22017
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 130719 aggaggaggaagaggggagg 130738
>gb|AC166246.1| Mus musculus BAC clone RP24-80F22 from chromosome 17, complete sequence Length = 194452 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 14394 aggaggaggaagaggggagg 14375
>emb|AJ784939.1| Mus musculus mRNA for polyserase-2 protein Length = 2550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1470 ctaccaggaggaggaagagg 1489
>emb|AJ784938.1| Rattus norvegicus mRNA for polyserase-2 protein Length = 2628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1542 ctaccaggaggaggaagagg 1561
>gb|AC120393.16| Mus musculus chromosome 7, clone RP24-312B12, complete sequence Length = 183977 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 120362 aggaggaggaagaggggagg 120343
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 46150 aggaggaggaagaggggagg 46169
>gb|AC084083.10| Homo sapiens chromosome 8, clone RP11-550A5, complete sequence Length = 209859 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ttctggataggcaggcagag 379 |||||||||||||||||||| Sbjct: 114530 ttctggataggcaggcagag 114549
>gb|AC105337.7| Homo sapiens chromosome 17, clone CTD-2116F7, complete sequence Length = 126083 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 36842 aggaggaggaagaggggagg 36823
>gb|AC153163.2| Ornithorhynchus anatinus BAC clone OABb-434A1 from chromosome unknown, complete sequence Length = 156066 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 31894 aggaggaggaagaggggagg 31875
>gb|AC005342.1| Homo sapiens 12p13.3 PAC RPCI5-1096D14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 220257 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 54182 aggaggaggaagaggggagg 54201
>gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170004 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gccacaacacttgcaacggt 296 |||||||||||||||||||| Sbjct: 125528 gccacaacacttgcaacggt 125509
>gb|AC106810.2| Homo sapiens chromosome 5 clone RP11-549K20, complete sequence Length = 91853 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 66210 aggaggaggaagaggggagg 66229
>gb|AC156984.9| Mus musculus chromosome 5, clone RP23-418H8, complete sequence Length = 171080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 22380 aggaggaggaagaggggagg 22399
>gb|AC151285.2| Mus musculus BAC clone RP23-426D6 from chromosome 17, complete sequence Length = 225650 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 168526 aggaggaggaagaggggagg 168507 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 96814 aggaggaggaagaggggagg 96795
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome Length = 2839318 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 ctaagattgcgccgtccatc 424 |||||||||||||||||||| Sbjct: 365636 ctaagattgcgccgtccatc 365617 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 ctaagattgcgccgtccatc 424 |||||||||||||||||||| Sbjct: 348886 ctaagattgcgccgtccatc 348867
>gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosome 16, complete sequence Length = 176390 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 68221 aggaggaggaagaggggagg 68240
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 81806 aggaggaggaagaggggagg 81825
>dbj|AK050092.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730014I16 product:unclassifiable, full insert sequence Length = 1753 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 491 aggaggaggaagaggggagg 510
>dbj|AK054042.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230014E18 product:unclassifiable, full insert sequence Length = 860 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 catctgaagaagatgctaag 409 |||||||||||||||||||| Sbjct: 520 catctgaagaagatgctaag 539
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 12697576 aggaggaggaagaggggagg 12697595
>gb|AY260957.1| Homo sapiens insulin-like growth factor 1 (somatomedin C) (IGF1) gene, complete cds Length = 88066 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gccacaacacttgcaacggt 296 |||||||||||||||||||| Sbjct: 43424 gccacaacacttgcaacggt 43405
>gb|AC084882.2|AC084882 Homo sapiens chromosome 15 clone RP11-408J6 map 15q21.1, complete sequence Length = 193804 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 80235 aggaggaggaagaggggagg 80216
>ref|NM_001011560.1| Rattus norvegicus polyserase-2 (LOC497040), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 1542 ctaccaggaggaggaagagg 1561
>gb|AC157519.2| Mus musculus BAC clone RP23-202O17 from chromosome 19, complete sequence Length = 215073 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 171911 aggaggaggaagaggggagg 171892
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 55266 aggaggaggaagaggggagg 55285
>gb|AC153374.5| Mus musculus 6 BAC RP23-281H4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204379 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 31601 aggaggaggaagaggggagg 31582
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence Length = 214840 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 42163 aggaggaggaagaggggagg 42182
>dbj|AK057909.1| Homo sapiens cDNA FLJ25180 fis, clone CBR09247 Length = 2289 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 1628 aggaggaggaagaggggagg 1609
>emb|BX537128.6| Mouse DNA sequence from clone RP23-12K23 on chromosome X, complete sequence Length = 173195 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 81492 aggaggaggaagaggggagg 81473
>gb|AC154222.2| Mus musculus BAC clone RP24-375M13 from 13, complete sequence Length = 169114 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 106424 aggaggaggaagaggggagg 106443
>gb|AC149222.4| Mus musculus BAC clone RP23-325D10 from 7, complete sequence Length = 220651 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 18527 ctaccaggaggaggaagagg 18546
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 12820 aggaggaggaagaggggagg 12839
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 38515 aggaggaggaagaggggagg 38534
>emb|Y11666.1|MMHEXII1 Mus musculus gene for hexokinase II, exon 1 (and joined CDS) Length = 6151 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 2764 aggaggaggaagaggggagg 2745
>gb|AC107633.11| Mus musculus chromosome 12, clone RP23-7P3, complete sequence Length = 202640 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 198424 aggaggaggaagaggggagg 198405
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete sequence Length = 177433 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 caggaggaggaagaggggag 339 |||||||||||||||||||| Sbjct: 16442 caggaggaggaagaggggag 16461
>emb|AL713913.10| Mouse DNA sequence from clone RP23-125F10 on chromosome 2, complete sequence Length = 190485 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 176479 aggaggaggaagaggggagg 176460
>emb|CT573284.1| Platypus DNA sequence from clone CLM1-349H20, complete sequence Length = 151975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 45531 aggaggaggaagaggggagg 45512
>gb|AC119921.12| Mus musculus chromosome 12, clone RP24-252B23, complete sequence Length = 162290 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 96031 aggaggaggaagaggggagg 96050
>gb|AC167817.4| Mus musculus BAC clone RP23-146N9 from chromosome 17, complete sequence Length = 213670 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 106092 aggaggaggaagaggggagg 106111
>emb|CT030648.7| Mouse DNA sequence from clone RP24-440M15 on chromosome 17, complete sequence Length = 206631 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 90580 aggaggaggaagaggggagg 90561
>emb|AL935309.8| Mouse DNA sequence from clone RP24-113M11 on chromosome 2, complete sequence Length = 45336 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 41262 aggaggaggaagaggggagg 41243
>gb|AC140324.3| Mus musculus BAC clone RP23-402K14 from 6, complete sequence Length = 200190 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 177379 aggaggaggaagaggggagg 177360
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 104994 aggaggaggaagaggggagg 105013
>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194042 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 89645 aggaggaggaagaggggagg 89626
>gb|AC079445.28| Mus musculus strain C57BL/6J chromosome 5 clone rp23-403l21, complete sequence Length = 189517 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 102120 aggaggaggaagaggggagg 102139
>gb|AC073435.26| Mus musculus strain C57BL/6J chromosome 9 clone rp23-383h20, complete sequence Length = 221953 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 3501 aggaggaggaagaggggagg 3482
>gb|AC157945.2| Mus musculus BAC clone RP23-289C11 from chromosome 9, complete sequence Length = 216396 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 215876 aggaggaggaagaggggagg 215895
>dbj|AP006641.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34I09, TM0246b, complete sequence Length = 32298 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 29092 aggaggaggaagaggggagg 29111
>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence Length = 234061 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 57716 aggaggaggaagaggggagg 57697
>gb|AC158398.2| Mus musculus BAC clone RP23-63H11 from chromosome 12, complete sequence Length = 171334 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 64355 aggaggaggaagaggggagg 64374
>emb|AL805904.12| Mouse DNA sequence from clone RP23-47B18 on chromosome 4, complete sequence Length = 132319 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 41586 aggaggaggaagaggggagg 41605
>emb|AL591495.12| Mouse DNA sequence from clone RP23-61O3 on chromosome 2, complete sequence Length = 239758 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 237359 aggaggaggaagaggggagg 237378
>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete sequence Length = 205405 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 133743 aggaggaggaagaggggagg 133724
>gb|AC148774.4| Mus musculus chromosome 3, clone RP24-400J22, complete sequence Length = 135817 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 aggaggaggaagaggggagg 340 |||||||||||||||||||| Sbjct: 45439 aggaggaggaagaggggagg 45420
>gb|AC104431.2| Homo sapiens chromosome 8 clone RP11-550A5 map 8q24.2, complete sequence Length = 209870 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ttctggataggcaggcagag 379 |||||||||||||||||||| Sbjct: 95329 ttctggataggcaggcagag 95310
>gb|AC093175.9| Mus musculus Strain C57BL6/J Chromosome 7 BAC, RP23-200D13, complete sequence Length = 219763 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ctaccaggaggaggaagagg 335 |||||||||||||||||||| Sbjct: 180710 ctaccaggaggaggaagagg 180729 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,248,216 Number of Sequences: 3902068 Number of extensions: 3248216 Number of successful extensions: 112872 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 112277 Number of HSP's gapped (non-prelim): 596 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)