>YFGA_ECOLI (P27434) Putative HTH-type transcriptional regulator yfgA|
          Length = 337

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -3

Query: 433 TSSPPETXXXXXXXXXREI*SAPVP---PRQSTKVTPTQPRIQTSDTHMPAA 287
           TS+PP +             +AP P   P+Q+  V+P+Q  + T+ T  P A
Sbjct: 177 TSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTAATPAPTA 228

>HM26_CAEEL (P34522) Homeobox protein ceh-26|
          Length = 586

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 367 PVPPRQSTKVTPTQPRIQTSDTHMPAAGGG 278
           P PP Q   + P  P    +  H P AGGG
Sbjct: 298 PQPPPQFHPIFPANPLFHMAPPHHPVAGGG 327


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,909,729
Number of Sequences: 219361
Number of extensions: 665426
Number of successful extensions: 2294
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2293
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)