ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470314.1| Oryza sativa (japonica cultivar-group), mRNA 90 7e-15
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 90 7e-15
3gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 90 7e-15
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
5dbj|AK121030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
6dbj|AK069847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
7dbj|AK065741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
8gb|BT016597.1| Zea mays clone Contig430 mRNA sequence 46 0.099
9gb|AF323675.1|AF323675 Bradyrhizobium japonicum Aspk (lysC) and ... 44 0.39
10dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.39
11gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
12gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
13ref|XM_977862.1| PREDICTED: Mus musculus similar to RNA binding ... 42 1.5
14ref|XM_989409.1| PREDICTED: Mus musculus similar to RNA binding ... 42 1.5
15gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosom... 42 1.5
16emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.5
17emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 42 1.5
18gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.5
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20gb|AC099522.3| Homo sapiens chromosome 5 clone RP11-79P5, comple... 42 1.5
21dbj|AK068482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
22emb|AM087403.1| Streptomyces venezuelae pSVH1 plasmid 42 1.5
23gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, compl... 42 1.5
24gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.1
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 6.1
26gb|BC080632.1| Homo sapiens cDNA clone IMAGE:6538748, **** WARNI... 40 6.1
27ref|NM_005354.2| Homo sapiens jun D proto-oncogene (JUND), mRNA 40 6.1
28emb|X56681.1|HSJUNDR Human junD mRNA 40 6.1
29emb|X51346.1|HSJUND Human jun-D mRNA for JUN-D protein 40 6.1
30emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.1
31emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.1
32emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.1
33emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.1
34emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.1
35emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.1
36gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 40 6.1
37emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 6.1
38gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 6.1
39dbj|AK223630.1| Homo sapiens mRNA for jun D proto-oncogene varia... 40 6.1
40gb|AC008397.7|AC008397 Homo sapiens chromosome 19 clone CTC-251H... 40 6.1
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.1
42gb|AC007136.1|AC007136 Homo sapiens chromosome 19, cosmid F20063... 40 6.1
43emb|CT033785.8| Mouse DNA sequence from clone RP23-445G17 on chr... 40 6.1
44gb|AC154335.1| Mus musculus BAC clone RP24-499C1 from 13, comple... 40 6.1
45gb|AD000017.1|MSGY409 Mycobacterium tuberculosis sequence from c... 40 6.1
46gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from c... 40 6.1 
>ref|XM_470314.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3868

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 293 gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
           |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 351 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 410

                    
Query: 353 cctgggcgg 361
           | |||||||
Sbjct: 411 cttgggcgg 419
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 293      gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
                |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 34711490 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 34711431

                         
Query: 353      cctgggcgg 361
                | |||||||
Sbjct: 34711430 cttgggcgg 34711422
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
              sequence
          Length = 164352

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                          
Query: 293    gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
              |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 151160 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 151219

                       
Query: 353    cctgggcgg 361
              | |||||||
Sbjct: 151220 cttgggcgg 151228
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 293      gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
                |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 34801562 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 34801503

                         
Query: 353      cctgggcgg 361
                | |||||||
Sbjct: 34801502 cttgggcgg 34801494
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>dbj|AK121030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050G23, full
           insert sequence
          Length = 2400

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 293 gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
           |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 258 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 317

                    
Query: 353 cctgggcgg 361
           | |||||||
Sbjct: 318 cttgggcgg 326
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>dbj|AK069847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034C10, full
           insert sequence
          Length = 3781

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 293 gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
           |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 264 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 323

                    
Query: 353 cctgggcgg 361
           | |||||||
Sbjct: 324 cttgggcgg 332
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>dbj|AK065741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040K13, full
           insert sequence
          Length = 2740

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                       
Query: 293 gggcatgtgggtgtcgctggtctggatccgcggctgcgtgggcgtcaccttcgtcgactg 352
           |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| 
Sbjct: 352 gggcatgtgggtttcgctggtctggatccgtgggtgcgtgggcgtcacgttcgtcgacta 411

                    
Query: 353 cctgggcgg 361
           | |||||||
Sbjct: 412 cttgggcgg 420
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>gb|BT016597.1| Zea mays clone Contig430 mRNA sequence
          Length = 762

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 384 cggccccggcggcggccgcgcgc 406
           |||||||||||||||||||||||
Sbjct: 98  cggccccggcggcggccgcgcgc 120
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>gb|AF323675.1|AF323675 Bradyrhizobium japonicum Aspk (lysC) and EnzymeI-Ntr (ptsP) genes,
            complete cds
          Length = 4091

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 389  ccggcggcggccgcgcgctgcg 410
            ||||||||||||||||||||||
Sbjct: 3383 ccggcggcggccgcgcgctgcg 3404
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 389    ccggcggcggccgcgcgctgcg 410
              ||||||||||||||||||||||
Sbjct: 214422 ccggcggcggccgcgcgctgcg 214443
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>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05,
            complete sequence
          Length = 108479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 394  ggcggccgcgcgctgcggcgg 414
            |||||||||||||||||||||
Sbjct: 3325 ggcggccgcgcgctgcggcgg 3305
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>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07,
              complete sequence
          Length = 148731

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 394    ggcggccgcgcgctgcggcgg 414
              |||||||||||||||||||||
Sbjct: 147563 ggcggccgcgcgctgcggcgg 147543
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>ref|XM_977862.1| PREDICTED: Mus musculus similar to RNA binding motif protein 24
           (LOC380843), mRNA
          Length = 3090

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 387 ccccggcggcggccgcgcgctgcgg 411
           |||||||||| ||||||||||||||
Sbjct: 501 ccccggcggccgccgcgcgctgcgg 525
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>ref|XM_989409.1| PREDICTED: Mus musculus similar to RNA binding motif protein 24,
           transcript variant 3 (LOC666794), mRNA
          Length = 3224

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 387 ccccggcggcggccgcgcgctgcgg 411
           |||||||||| ||||||||||||||
Sbjct: 635 ccccggcggccgccgcgcgctgcgg 659
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>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete
             sequence
          Length = 177414

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 387   ccccggcggcggccgcgcgctgcgg 411
             |||||||||| ||||||||||||||
Sbjct: 38199 ccccggcggccgccgcgcgctgcgg 38175
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    ggccccggcggcggccgcgcg 405
              |||||||||||||||||||||
Sbjct: 182108 ggccccggcggcggccgcgcg 182088
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 385    ggccccggcggcggccgcgcg 405
              |||||||||||||||||||||
Sbjct: 101251 ggccccggcggcggccgcgcg 101231
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 117     ccgaattcgccctgctcccggcgga 141
               |||||||||||||||| ||||||||
Sbjct: 4789891 ccgaattcgccctgctgccggcgga 4789867
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 394      ggcggccgcgcgctgcggcgg 414
                |||||||||||||||||||||
Sbjct: 28993270 ggcggccgcgcgctgcggcgg 28993250
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>gb|AC099522.3| Homo sapiens chromosome 5 clone RP11-79P5, complete sequence
          Length = 173073

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 390   cggcggcggccgcgcgctgcggcgg 414
             |||||||||| ||||||||||||||
Sbjct: 72718 cggcggcggcggcgcgctgcggcgg 72694
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>dbj|AK068482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153L21, full
           insert sequence
          Length = 3108

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 394 ggcggccgcgcgctgcggcgg 414
           |||||||||||||||||||||
Sbjct: 36  ggcggccgcgcgctgcggcgg 16
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>emb|AM087403.1| Streptomyces venezuelae pSVH1 plasmid
          Length = 12652

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 384  cggccccggcggcggccgcgc 404
            |||||||||||||||||||||
Sbjct: 8543 cggccccggcggcggccgcgc 8563
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>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence
          Length = 240321

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 387    ccccggcggcggccgcgcgctgcgg 411
              |||||||||| ||||||||||||||
Sbjct: 228715 ccccggcggccgccgcgcgctgcgg 228691
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 306     tcgctggtctggatccgcggctgc 329
               |||||||| |||||||||||||||
Sbjct: 4305331 tcgctggtgtggatccgcggctgc 4305354



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     cggccccggcggcggccgcg 403
               ||||||||||||||||||||
Sbjct: 1283907 cggccccggcggcggccgcg 1283888
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     cggccccggcggcggccgcg 403
               ||||||||||||||||||||
Sbjct: 3147636 cggccccggcggcggccgcg 3147617



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 391     ggcggcggccgcgcgctgcggcgg 414
               |||||||||||||||| |||||||
Sbjct: 2134366 ggcggcggccgcgcgccgcggcgg 2134389
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>gb|BC080632.1| Homo sapiens cDNA clone IMAGE:6538748, **** WARNING: chimeric clone
           ****
          Length = 2121

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ggccccggcggcggccgcgc 404
           ||||||||||||||||||||
Sbjct: 512 ggccccggcggcggccgcgc 531
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>ref|NM_005354.2| Homo sapiens jun D proto-oncogene (JUND), mRNA
          Length = 1891

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ggccccggcggcggccgcgc 404
           ||||||||||||||||||||
Sbjct: 720 ggccccggcggcggccgcgc 739
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>emb|X56681.1|HSJUNDR Human junD mRNA
          Length = 1891

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ggccccggcggcggccgcgc 404
           ||||||||||||||||||||
Sbjct: 720 ggccccggcggcggccgcgc 739
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>emb|X51346.1|HSJUND Human jun-D mRNA for JUN-D protein
          Length = 1612

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ggccccggcggcggccgcgc 404
           ||||||||||||||||||||
Sbjct: 416 ggccccggcggcggccgcgc 435
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>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13
          Length = 244800

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    tcgctggtctggatccgcggctgc 329
              |||||||| |||||||||||||||
Sbjct: 146276 tcgctggtgtggatccgcggctgc 146299
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    cggccccggcggcggccgcg 403
              ||||||||||||||||||||
Sbjct: 250630 cggccccggcggcggccgcg 250611
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>emb|BX572602.1| Rhodopseudomonas palustris CGA009 complete genome; segment 10/16
          Length = 349981

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 313   tctggatccgcggctgcgtgggcgtcac 340
             |||||||| ||||| |||||||||||||
Sbjct: 18760 tctggatcggcggcggcgtgggcgtcac 18733
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     cggccccggcggcggccgcg 403
               ||||||||||||||||||||
Sbjct: 1324992 cggccccggcggcggccgcg 1324973



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 391    ggcggcggccgcgcgctgcggcgg 414
              |||||||||||||||| |||||||
Sbjct: 296215 ggcggcggccgcgcgccgcggcgg 296238
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>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    tcgctggtctggatccgcggctgc 329
              |||||||| |||||||||||||||
Sbjct: 182282 tcgctggtgtggatccgcggctgc 182305
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 384    cggccccggcggcggccgcg 403
              ||||||||||||||||||||
Sbjct: 298789 cggccccggcggcggccgcg 298770
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 406     ctgcggcggtttcaggaggg 425
               ||||||||||||||||||||
Sbjct: 3637257 ctgcggcggtttcaggaggg 3637238
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 384    cggccccggcggcggccgcg 403
              ||||||||||||||||||||
Sbjct: 193512 cggccccggcggcggccgcg 193531
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 391     ggcggcggccgcgcgctgcggcgg 414
               |||||||||||||||| |||||||
Sbjct: 2028385 ggcggcggccgcgcgccgcggcgg 2028362



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     cggccccggcggcggccgcg 403
               ||||||||||||||||||||
Sbjct: 1307926 cggccccggcggcggccgcg 1307945
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>dbj|AK223630.1| Homo sapiens mRNA for jun D proto-oncogene variant, clone:
           FCC135B07
          Length = 1746

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 385 ggccccggcggcggccgcgc 404
           ||||||||||||||||||||
Sbjct: 684 ggccccggcggcggccgcgc 703
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>gb|AC008397.7|AC008397 Homo sapiens chromosome 19 clone CTC-251H24, complete sequence
          Length = 209519

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   ggccccggcggcggccgcgc 404
             ||||||||||||||||||||
Sbjct: 50243 ggccccggcggcggccgcgc 50224
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 389     ccggcggcggccgcgcgctg 408
               ||||||||||||||||||||
Sbjct: 4300255 ccggcggcggccgcgcgctg 4300274



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 393     cggcggccgcgcgctgcggc 412
               ||||||||||||||||||||
Sbjct: 4105386 cggcggccgcgcgctgcggc 4105367
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>gb|AC007136.1|AC007136 Homo sapiens chromosome 19, cosmid F20063, complete sequence
          Length = 42265

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   ccccggcggcggccgcgcgc 406
             ||||||||||||||||||||
Sbjct: 34165 ccccggcggcggccgcgcgc 34184
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>emb|CT033785.8| Mouse DNA sequence from clone RP23-445G17 on chromosome 13, complete
              sequence
          Length = 181922

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    ccccggcggcggccgcgcgc 406
              ||||||||||||||||||||
Sbjct: 129141 ccccggcggcggccgcgcgc 129122
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>gb|AC154335.1| Mus musculus BAC clone RP24-499C1 from 13, complete sequence
          Length = 177948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   ccccggcggcggccgcgcgc 406
             ||||||||||||||||||||
Sbjct: 13686 ccccggcggcggccgcgcgc 13667
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>gb|AD000017.1|MSGY409 Mycobacterium tuberculosis sequence from clone y409
          Length = 41321

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 306  tcgctggtctggatccgcggctgc 329
            |||||||| |||||||||||||||
Sbjct: 5196 tcgctggtgtggatccgcggctgc 5173
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>gb|AD000020.1|MSGY348 Mycobacterium tuberculosis sequence from clone y348
          Length = 40056

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   cggccccggcggcggccgcg 403
             ||||||||||||||||||||
Sbjct: 15938 cggccccggcggcggccgcg 15919


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,573,974
Number of Sequences: 3902068
Number of extensions: 1573974
Number of successful extensions: 34116
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32802
Number of HSP's gapped (non-prelim): 1314
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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