ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bastl40c03 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 166 bits (420), Expect(2) = 4e-41 Identities = 82/102 (80%), Positives = 89/102 (87%) Frame = +2 Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 310 M + G DRLTG+NKEAWKEG+IRGTAVLVK DVL LGDFHASLLDGVH ILG +GV+F Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVFR 436 RLVSATA DP NG RGK+GKPAHLEE+VVTMKSTAA ESVFR Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFR 102 Score = 20.8 bits (42), Expect(2) = 4e-41 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = +1 Query: 442 FEWDESQ 462 FEWDESQ Sbjct: 105 FEWDESQ 111
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 93.2 bits (230), Expect = 3e-19 Identities = 50/101 (49%), Positives = 69/101 (68%) Frame = +2 Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 310 MLL GL+D LTG NK A +++GT VL++ +VLDL DF A+++DG+ + LGK GV+ Sbjct: 1 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGK--GVTC 54 Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 +L+S+TA D NG RGKVG A LE+ V ++ S ES F Sbjct: 55 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKF 95
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 87.0 bits (214), Expect = 2e-17 Identities = 46/97 (47%), Positives = 64/97 (65%) Frame = +2 Query: 146 LVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSA 325 L D LTG E + K++GT VL+K +VLD DF+AS LD +H+ LG ++ RLVS+ Sbjct: 5 LRDLLTGGGNETTTK-KVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNK--ITLRLVSS 61 Query: 326 TAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVFR 436 D +NGS+GK+GK AHLE+ + T+ S A ES F+ Sbjct: 62 DVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFK 98
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 82.8 bits (203), Expect = 4e-16 Identities = 44/101 (43%), Positives = 71/101 (70%), Gaps = 1/101 (0%) Frame = +2 Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313 +L G++D +TG +K++ +++GT VL++ +VLDL DF A+++DG+ + LGK GV+ + Sbjct: 1 MLGGIIDTITGSSKQS----RLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGK--GVTCQ 54 Query: 314 LVSATAPDPQNGSRGKVGKPAHLEE-MVVTMKSTAAXESVF 433 L+S+TA DP NG+RGKVG A LE+ + ++ S ES F Sbjct: 55 LISSTAVDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRF 95
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 75.1 bits (183), Expect = 8e-14 Identities = 38/100 (38%), Positives = 65/100 (65%) Frame = +2 Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313 +L G++ LTG K +++G+ VL++ + LD+ DF A+++DG+ + LG+ GV+ + Sbjct: 1 MLGGIIGGLTGN-----KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGR--GVTCQ 53 Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 LVS++ DP NG+RG+VG A LE+ + ++ S ES F Sbjct: 54 LVSSSLVDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKF 93
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 73.2 bits (178), Expect = 3e-13 Identities = 44/98 (44%), Positives = 60/98 (61%) Frame = +2 Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313 +L GL D+LTGKN KI+G AVL+ +LD DF ASLLD VH++ G + ++ + Sbjct: 1 MLGGLKDKLTGKNGN-----KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFG--NSITCQ 53 Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXES 427 LVSAT D N RG VG A+LE+ + + S + ES Sbjct: 54 LVSATVADQNNEGRGIVGSEANLEQGLTDLPSVSQGES 91
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 66.2 bits (160), Expect = 4e-11 Identities = 38/100 (38%), Positives = 59/100 (59%) Frame = +2 Query: 134 LLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFR 313 +L LV L G + ++ K++GT V++K + LD D SL D + + LG+ VSF+ Sbjct: 1 MLGQLVGGLIGGHHDS---KKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQK--VSFQ 55 Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 L+S+ DP NG +GK PA+LE ++T+ AA E+ F Sbjct: 56 LISSVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAF 95
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 58.5 bits (140), Expect = 8e-09 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Frame = +2 Query: 194 KIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNGSRGKVGKP 373 K++GT V++ +VLD D SL + +LG+ VSF+L+S+ DP NG +GK P Sbjct: 18 KVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQK--VSFQLISSVQGDPTNGLQGKHSNP 75 Query: 374 AHLEEMVVTMKS-TAAXESVF 433 A+LE + T+ TA E+ F Sbjct: 76 AYLENSLFTLTPLTAGSETAF 96
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 57.4 bits (137), Expect = 2e-08 Identities = 35/101 (34%), Positives = 57/101 (56%) Frame = +2 Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSF 310 M L G+VD + GK+ K++G +L+K +VLD + AS++DG+ +LG+ VS Sbjct: 1 MSLGGIVDAILGKDDRP----KVKGRVILMKKNVLDFINIGASVVDGISDLLGQK--VSI 54 Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 +L+S + +G GK+ PA+LE + + A ES F Sbjct: 55 QLISGSV--NYDGLEGKLSNPAYLESWLTDITPITAGESTF 93
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 49.7 bits (117), Expect = 4e-06 Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 18/101 (17%) Frame = +2 Query: 185 KEGKIRGTAVLVKSDVLDL--------GDFHA----------SLLDGVHKILGKDDGVSF 310 K KIRGT VL++ +VLD G+ H S LDG+ LG+ VS Sbjct: 11 KGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRS--VSL 68 Query: 311 RLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 +L+SAT D NG +GKVGK LE ++ ++ + A ES F Sbjct: 69 QLISATKSDA-NG-KGKVGKDTFLEGVLASLPTLGAGESAF 107
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 48.1 bits (113), Expect = 1e-05 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 13/94 (13%) Frame = +2 Query: 194 KIRGTAVLVKSDVLDLG-------------DFHASLLDGVHKILGKDDGVSFRLVSATAP 334 KI+GT VL++ +VLD+ D S +D + LG+ VS +L+SAT P Sbjct: 14 KIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRS--VSLQLISATKP 71 Query: 335 DPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVFR 436 D +GK+GK LE ++ ++ + A +S F+ Sbjct: 72 DATG--KGKLGKATFLEGIISSLPTLGAGQSAFK 103
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 44.3 bits (103), Expect = 2e-04 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 18/98 (18%) Frame = +2 Query: 194 KIRGTAVLVKSDVLDLGDFH------------------ASLLDGVHKILGKDDGVSFRLV 319 KI+GT VL++ +VLD S LD + LG+ V+ +L+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRS--VALQLI 75 Query: 320 SATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 SAT P NG +GKVGK LE ++V++ + A ES F Sbjct: 76 SATKP-LANG-KGKVGKDTFLEGIIVSLPTLGAGESAF 111
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 43.9 bits (102), Expect = 2e-04 Identities = 29/80 (36%), Positives = 45/80 (56%) Frame = +2 Query: 194 KIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNGSRGKVGKP 373 KI+GT VL+ + L++ S +D ++ LG+ VS +L+SAT D +GKVGK Sbjct: 7 KIKGTVVLMPKNELEVNP-DGSAVDNLNAFLGRS--VSLQLISATKADAHG--KGKVGKD 61 Query: 374 AHLEEMVVTMKSTAAXESVF 433 LE + ++ + A ES F Sbjct: 62 TFLEGINTSLPTLGAGESAF 81
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 43.5 bits (101), Expect = 3e-04 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 13/94 (13%) Frame = +2 Query: 194 KIRGTAVLVKSDVLDLG-------------DFHASLLDGVHKILGKDDGVSFRLVSATAP 334 KI+GT VL++ +VL + D S LD + LG+ VS +L+SAT Sbjct: 11 KIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRP--VSLQLISATKA 68 Query: 335 DPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVFR 436 D NG +GK+GK LE ++ ++ + A +S F+ Sbjct: 69 DA-NG-KGKLGKATFLEGIITSLPTLGAGQSAFK 100
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 39.3 bits (90), Expect = 0.005 Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 20/100 (20%) Frame = +2 Query: 194 KIRGTAVLVKSDVLDL--------------------GDFHASLLDGVHKILGKDDGVSFR 313 K++GT +L++ +VLD+ G S++D LG+ V R Sbjct: 11 KLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGR--SVRLR 68 Query: 314 LVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 L+SAT D +GKV K A LE ++ ++ + +S F Sbjct: 69 LISATVADA--SGKGKVSKEAFLEGLLTSIPTLGDKQSAF 106
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 37.7 bits (86), Expect = 0.015 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 20/103 (19%) Frame = +2 Query: 185 KEGKIRGTAVLVKSDVLDLGDF----HASLLDGVHKILGK----------------DDGV 304 K KI+GT VL+ +VLD ++D ILG+ + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 305 SFRLVSATAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 S +L+SAT D GKVGK +LE+ + T+ + A + F Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAF 107
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 34.7 bits (78), Expect = 0.12 Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 13/96 (13%) Frame = +2 Query: 185 KEGKIRGTAVLVKSDVLDLGD-------------FHASLLDGVHKILGKDDGVSFRLVSA 325 K KI+GT V+++ +VLD+ F S +D + K +S +L+SA Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALTFAATK---ISIQLISA 63 Query: 326 TAPDPQNGSRGKVGKPAHLEEMVVTMKSTAAXESVF 433 T D G +GK+GK +L +T+ + A E + Sbjct: 64 TKAD---GGKGKIGKSTNLRGK-ITLPTLGAGEQAY 95
>AT132_MOUSE (Q9CTG6) Probable cation-transporting ATPase 13A2 (EC 3.6.3.-)| Length = 1169 Score = 32.7 bits (73), Expect = 0.47 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Frame = -3 Query: 417 AAVDFIVTTISS-----RCAGFPTLPRLPFCG---SGAVALTRRKETPSSLPRIL 277 AA++F+ T S+ + G+PT+P FC SG+ RK P LP++L Sbjct: 780 AALEFLPTESSAVMNGAKATGYPTVPEPQFCHLALSGSTFAVLRKHFPKLLPKVL 834
>ZN205_HUMAN (O95201) Zinc finger protein 205 (Zinc finger protein 210)| Length = 504 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +2 Query: 11 HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 142 H CP CAKC ++ + TH R + PC C +R ++ H Sbjct: 370 HKCPICAKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 416
>ZN449_HUMAN (Q6P9G9) Zinc finger protein 449 (Zinc finger and SCAN| domain-containing protein 19) Length = 518 Score = 30.0 bits (66), Expect = 3.1 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = +2 Query: 11 HHCPPCAKCI---SKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLH 142 H CP C KC S+ TG R+ S C C R R ++ H Sbjct: 323 HRCPQCGKCFARKSQLTGHQRIHSGEEPHKCPECGKRFLRSSDLYRH 369
>IF2P_ARCFU (O29490) Probable translation initiation factor IF-2| Length = 595 Score = 29.6 bits (65), Expect = 4.0 Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Frame = +2 Query: 131 MLLHGLVDRLTGKNKEAWKEGKIRGTAVLVKSDVLDLG-DFHASLLDGVHK------ILG 289 ++L GL R KN EGK RGT + VK + LG A L DG K I G Sbjct: 215 LILVGLAQRYLEKNLRLHIEGKGRGTVLEVKEE-RGLGVTCDAILYDGTLKVGDRIAIAG 273 Query: 290 KDDGVSFRLVSATAPDP 340 KD+ + + + P P Sbjct: 274 KDEVIVTNVKAILKPPP 290
>ZFP13_MOUSE (P10754) Zinc finger protein 13 (Zfp-13) (Krox-8 protein)| Length = 512 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +2 Query: 11 HHCPPCAKCISKGTG--TH-RLCSSCSALPCLRCRTREQRRGEMLLH 142 H CP C+KC ++ + TH R + PC C +R ++ H Sbjct: 378 HKCPICSKCFTQSSALVTHQRTHTGVKPYPCPECGKCFSQRSNLIAH 424
>MO4L1_RAT (Q6AYU1) Mortality factor 4-like protein 1 (MORF-related gene 15| protein) (Transcription factor-like protein MRG15) Length = 323 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = +2 Query: 170 NKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNG 349 N+E + EGK+RG A K+ L + K G DG S ++ P P Sbjct: 80 NQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGS----TSETPQPPRK 135 Query: 350 SRGKVGKPAHLEE 388 R +V EE Sbjct: 136 KRARVDPTVENEE 148
>MO4L1_MOUSE (P60762) Mortality factor 4-like protein 1 (MORF-related gene 15| protein) (Transcription factor-like protein MRG15) (Testis-expressed gene 189 protein) Length = 362 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = +2 Query: 170 NKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNG 349 N+E + EGK+RG A K+ L + K G DG S ++ P P Sbjct: 119 NQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGS----TSETPQPPRK 174 Query: 350 SRGKVGKPAHLEE 388 R +V EE Sbjct: 175 KRARVDPTVENEE 187
>MO4L1_HUMAN (Q9UBU8) Mortality factor 4-like protein 1 (MORF-related gene 15| protein) (Transcription factor-like protein MRG15) (MSL3-1 protein) Length = 362 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = +2 Query: 170 NKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNG 349 N+E + EGK+RG A K+ L + K G DG S ++ P P Sbjct: 119 NQEQYAEGKMRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGS----TSETPQPPRK 174 Query: 350 SRGKVGKPAHLEE 388 R +V EE Sbjct: 175 KRARVDPTVENEE 187
>TRUA_GEOKA (Q5L3Q7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 258 Score = 29.3 bits (64), Expect = 5.2 Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 2/113 (1%) Frame = +2 Query: 2 PYHHHCPPCAKCISKGTGTHRLCSSCSALPCLRCRTREQRRGEMLLHG--LVDRLTGKNK 175 PY H + + GTH S CSA + R R R E+ G L R G Sbjct: 134 PYSLHISAMNEALRLLHGTHDFTSFCSAKTSIEDRVRTMYRAEVKADGPMLEFRFVG--- 190 Query: 176 EAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAP 334 G + ++ VL++G S D + KD RL TAP Sbjct: 191 ----SGFLYNMVRIIVGTVLEIGQGKRSPADISTLLAAKDR----RLAGPTAP 235
>MO4L1_PONPY (Q5NVP9) Mortality factor 4-like protein 1| Length = 323 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/73 (28%), Positives = 29/73 (39%) Frame = +2 Query: 170 NKEAWKEGKIRGTAVLVKSDVLDLGDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNG 349 N+E + EGK+RG A K+ L + K G DG S ++ P P Sbjct: 80 NQEQYAEGKMRGAAPGKKTSGLQQKNVDVKTKKNKQKTPGNGDGGS----TSETPQPPRK 135 Query: 350 SRGKVGKPAHLEE 388 R +V EE Sbjct: 136 KRARVDPTVENEE 148
>PTPR2_MACNE (O02695) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (M1851) Length = 1013 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = -3 Query: 459 RLVPLEGDLNTDSXAAVDFIVTTISSRCAGFPTLPRLPFCGSGAVALTRRKETPSSLPRI 280 +L P E DS ++ +S+ A P P G G++ PS +PR Sbjct: 221 QLQPDELSPKVDSSVERHHLMAALSAYAAQRPPAPP----GKGSLEPQYLLRAPSRMPRP 276 Query: 279 LWTPSRREAWKSP 241 L +P+ + W SP Sbjct: 277 LLSPAVPQKWPSP 289
>DNAA_BIFLO (Q8G6K0) Chromosomal replication initiator protein dnaA| Length = 500 Score = 28.5 bits (62), Expect = 8.9 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%) Frame = +2 Query: 188 EGKIRGTAVLV--KSDVLDL--GDFHASLLDGVHKILGKDDGVSFRLVSATAPDPQNGSR 355 EG T VL +D L GD + SLL + + G++ +F++V T P+P + ++ Sbjct: 43 EGVFGSTIVLCVDNNDTLQAIQGDLNDSLLQALRTVTGENMFPAFKVVPKTEPEPLSEAK 102 Query: 356 GKVGKPAHLEEMV 394 P+ + V Sbjct: 103 PAQPYPSEISPTV 115
>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)| Length = 482 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +2 Query: 17 CPPCAKCISKGTGTHRLCSSCSALPCLRCR 106 CP C CI K G C+ + C RCR Sbjct: 287 CPQCHSCIEKAGG-------CNHIQCTRCR 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.135 0.459 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,197,492 Number of Sequences: 219361 Number of extensions: 843431 Number of successful extensions: 3971 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3954 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
