Clone Name | bastl40b11 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_184948.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1341 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cccgcagcgccagcgccagcg 84 ||||||||||||||||||||| Sbjct: 268 cccgcagcgccagcgccagcg 248
>gb|AF550415.2| Citrobacter freundii plasmid pCTX-M3, complete sequence Length = 89468 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 catctcccgcagcgccagcgc 79 ||||||||||||||||||||| Sbjct: 16345 catctcccgcagcgccagcgc 16325
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cccgcagcgccagcgccagcg 84 ||||||||||||||||||||| Sbjct: 20233525 cccgcagcgccagcgccagcg 20233545
>ref|XM_848640.1| PREDICTED: Canis familiaris similar to dachsous 1 precursor (LOC476837), mRNA Length = 10065 Score = 42.1 bits (21), Expect = 0.99 Identities = 24/25 (96%) Strand = Plus / Minus Query: 61 tctcccgcagcgccagcgccagcgg 85 ||||| ||||||||||||||||||| Sbjct: 4486 tctccggcagcgccagcgccagcgg 4462
>gb|AY422214.1| Erwinia amylovora strain LebB66 plasmid pEL60 complete sequence Length = 60145 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 catctcccgcagcgccagcgc 79 ||||||||||||||||||||| Sbjct: 12904 catctcccgcagcgccagcgc 12884
>gb|AC084404.8|AC084404 Oryza sativa chromosome 3 BAC OSJNBa0026A15 genomic sequence, complete sequence Length = 156929 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cccgcagcgccagcgccagcg 84 ||||||||||||||||||||| Sbjct: 28832 cccgcagcgccagcgccagcg 28852
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 cccgcagcgccagcgccagcg 84 ||||||||||||||||||||| Sbjct: 20226554 cccgcagcgccagcgccagcg 20226574
>dbj|AB093208.1| Zea mays ache mRNA for hypothetical protein, complete cds Length = 1471 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cccgcagcgccagcgccagcg 84 ||||||||||||||||||||| Sbjct: 164 cccgcagcgccagcgccagcg 144
>dbj|AK068863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170P13, full insert sequence Length = 1929 Score = 42.1 bits (21), Expect = 0.99 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 cccgcagcgccagcgccagcg 84 ||||||||||||||||||||| Sbjct: 248 cccgcagcgccagcgccagcg 228
>gb|AC117825.9| Mus musculus chromosome 18, clone RP24-80J4, complete sequence Length = 198559 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgcagcgccagcgccagcg 84 |||||||||||||||||||| Sbjct: 71493 ccgcagcgccagcgccagcg 71512
>dbj|AK138487.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330038E02 product:galanin receptor 1, full insert sequence Length = 2571 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgcagcgccagcgccagcg 84 |||||||||||||||||||| Sbjct: 28 ccgcagcgccagcgccagcg 47
>gb|AC157548.7| Mus musculus chromosome 18, clone RP24-310H1, complete sequence Length = 177509 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccgcagcgccagcgccagcg 84 |||||||||||||||||||| Sbjct: 156194 ccgcagcgccagcgccagcg 156175
>gb|AF294265.1|AF294265 Mus musculus galanin receptor-1 (Galr1) gene, promoter and 5' UTR Length = 3918 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccgcagcgccagcgccagcg 84 |||||||||||||||||||| Sbjct: 3271 ccgcagcgccagcgccagcg 3290
>gb|AC136605.2| Homo sapiens chromosome 5 clone RP11-1380A14, complete sequence Length = 171395 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 tccccgcacacccaccttct 46 |||||||||||||||||||| Sbjct: 11466 tccccgcacacccaccttct 11447
>gb|AY107095.1| Zea mays PCO131316 mRNA sequence Length = 1042 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 ccgcagcgccagcgccagcg 84 |||||||||||||||||||| Sbjct: 176 ccgcagcgccagcgccagcg 157
>gb|AC093290.4| Homo sapiens chromosome 5 clone RP11-47L17, complete sequence Length = 179443 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccccgcacacccaccttct 46 |||||||||||||||||||| Sbjct: 137770 tccccgcacacccaccttct 137789
>gb|AC008659.5| Homo sapiens chromosome 5 clone CTB-26E19, complete sequence Length = 184981 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tccccgcacacccaccttct 46 |||||||||||||||||||| Sbjct: 6996 tccccgcacacccaccttct 7015 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,017,076 Number of Sequences: 3902068 Number of extensions: 1017076 Number of successful extensions: 22864 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 22822 Number of HSP's gapped (non-prelim): 42 length of query: 297 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 275 effective length of database: 17,147,199,772 effective search space: 4715479937300 effective search space used: 4715479937300 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)