ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl40b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BC073264.1| Xenopus laevis MGC80627 protein, mRNA (cDNA clone... 44 0.32
2ref|XM_415674.1| PREDICTED: Gallus gallus similar to fetal Alzhe... 44 0.32
3ref|XM_390271.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.32
4gb|AF470350.1| Tortula ruralis WD40 mRNA, complete cds 44 0.32
5ref|NM_001031238.1| Gallus gallus similar to hypothetical protei... 44 0.32
6emb|AJ719355.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.32
7emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on ch... 44 0.32
8gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene ... 42 1.3
9ref|XM_715624.1| Candida albicans SC5314 putative activator of f... 42 1.3
10ref|XM_715496.1| Candida albicans SC5314 putative activator of f... 42 1.3
11gb|AC148237.7| Medicago truncatula clone mth2-1o14, complete seq... 42 1.3
12gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, com... 42 1.3
13ref|NM_164827.1| Drosophila melanogaster CG17834-RC, transcript ... 42 1.3
14ref|NM_135398.2| Drosophila melanogaster CG17834-RA, transcript ... 42 1.3
15gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, r... 42 1.3
16gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, r... 42 1.3
17gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30... 42 1.3
18emb|AJ249493.1|DME249493 Drosophila melanogaster mRNA for hypoth... 42 1.3
19gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.0
20ref|XM_529349.1| PREDICTED: Pan troglodytes LOC450763 (LOC450763... 40 5.0
21gb|AC149676.2| Bos taurus BAC CH240-43C16 (Children's Hospital ... 40 5.0
22gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, c... 40 5.0
23gb|AC150881.4| Bos taurus BAC CH240-354J15 (Children's Hospital... 40 5.0
24gb|AC149762.2| Bos taurus BAC CH240-123C23 (Children's Hospital... 40 5.0
25ref|XM_863353.1| PREDICTED: Canis familiaris hypothetical protei... 40 5.0
26emb|CR956423.7| Pig DNA sequence from clone CH242-20D9 on chromo... 40 5.0
27gb|AC146777.27| Medicago truncatula clone mth2-173c10, complete ... 40 5.0
28gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete se... 40 5.0
29emb|AL136967.5| Human DNA sequence from clone RP1-149M18 on chro... 40 5.0
30emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16... 40 5.0
31emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigrovi... 40 5.0
32emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence 40 5.0
33gb|AC112657.2| Homo sapiens X BAC RP11-647I17 (Roswell Park Canc... 40 5.0
34gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromo... 40 5.0
35gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 5.0
36gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.0
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
38gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, r... 40 5.0
39gb|AF200339.1|AF200339 Gallus gallus cone-type transducin alpha ... 40 5.0
40ref|NM_204690.1| Gallus gallus cone-type transducin alpha subuni... 40 5.0
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.0
42gb|AC160057.2| Pan troglodytes BAC clone CH251-416M4 from chromo... 40 5.0
43dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
44dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
45gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987S... 40 5.0
46dbj|AK102224.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
47ref|NM_211443.1| Eremothecium gossypii AGL286Cp (AGL286C), mRNA 40 5.0
48gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30... 40 5.0
49emb|CR942525.2| Xenopus tropicalis finished cDNA, clone TEgg062a19 40 5.0
50dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.0
51emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chr... 40 5.0
52emb|AL627105.13| Mouse DNA sequence from clone RP23-383D12 on ch... 40 5.0
53dbj|AB028186.1| Oryza sativa mRNA for OsNAC7 protein, complete cds 40 5.0

>gb|BC073264.1| Xenopus laevis MGC80627 protein, mRNA (cDNA clone MGC:80627
            IMAGE:5506375), complete cds
          Length = 3061

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 281  agttcagggaggaggtggagatcatggagg 310
            ||||||||| | ||||||||||||||||||
Sbjct: 1073 agttcagggtgaaggtggagatcatggagg 1044



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>ref|XM_415674.1| PREDICTED: Gallus gallus similar to fetal Alzheimer antigen isoform
           2; bromodomain and PHD domain transcription factor;
           nucleosome remodeling factor, large subunit; fetal
           Alz-50 reactive clone 1 (LOC417422), mRNA
          Length = 8802

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 289 gaggaggtggagatcatggaggagga 314
           ||||||| ||||||||||||||||||
Sbjct: 241 gaggaggaggagatcatggaggagga 266



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>ref|XM_390271.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10095.1)
            partial mRNA
          Length = 4200

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 222  gtagttcgtgaggatgatggag 243
            ||||||||||||||||||||||
Sbjct: 1202 gtagttcgtgaggatgatggag 1181



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>gb|AF470350.1| Tortula ruralis WD40 mRNA, complete cds
          Length = 1628

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 289 gaggaggtggagatcatggaggagga 314
           |||||||||||||| |||||||||||
Sbjct: 124 gaggaggtggagatgatggaggagga 149



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>ref|NM_001031238.1| Gallus gallus similar to hypothetical protein (LOC423926), mRNA
          Length = 2305

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 291 ggaggtggagatcatggaggaggaaggcggcggc 324
           ||||| ||||| |||||||||||| |||||||||
Sbjct: 146 ggaggaggagagcatggaggaggagggcggcggc 179



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>emb|AJ719355.1| Gallus gallus mRNA for hypothetical protein, clone 1j9
          Length = 2305

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 291 ggaggtggagatcatggaggaggaaggcggcggc 324
           ||||| ||||| |||||||||||| |||||||||
Sbjct: 146 ggaggaggagagcatggaggaggagggcggcggc 179



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>emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on chromosome X, complete
             sequence
          Length = 114708

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 281   agttcagggaggaggtggagat 302
             ||||||||||||||||||||||
Sbjct: 37921 agttcagggaggaggtggagat 37942



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>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete
             sequence
          Length = 99318

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 288   ggaggaggtggagatcatggaggaggaag 316
             |||||||||||||||  ||||||||||||
Sbjct: 18316 ggaggaggtggagatggtggaggaggaag 18288



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>ref|XM_715624.1| Candida albicans SC5314 putative activator of forkhead-like
           transcription factor (CaO19_11757), mRNA
          Length = 894

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  tttcatcaacatcagtagatt 64
           |||||||||||||||||||||
Sbjct: 103 tttcatcaacatcagtagatt 83



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>ref|XM_715496.1| Candida albicans SC5314 putative activator of forkhead-like
           transcription factor (CaO19_4281), mRNA
          Length = 894

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  tttcatcaacatcagtagatt 64
           |||||||||||||||||||||
Sbjct: 103 tttcatcaacatcagtagatt 83



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>gb|AC148237.7| Medicago truncatula clone mth2-1o14, complete sequence
          Length = 116678

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    ggtggagatcatggaggagga 314
              |||||||||||||||||||||
Sbjct: 114776 ggtggagatcatggaggagga 114796



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>gb|AC027449.6| Homo sapiens chromosome 18, clone RP11-535A5, complete sequence
          Length = 149660

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 210   atctttagcactgtagttcgtgagg 234
             ||||||| |||||||||||||||||
Sbjct: 76736 atctttaacactgtagttcgtgagg 76712



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>ref|NM_164827.1| Drosophila melanogaster CG17834-RC, transcript variant C (CG17834),
            mRNA
          Length = 1865

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 289  gaggaggtggagatcatggaggagg 313
            ||||||| |||||||||||||||||
Sbjct: 1022 gaggaggaggagatcatggaggagg 1046



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>ref|NM_135398.2| Drosophila melanogaster CG17834-RA, transcript variant A (CG17834),
            mRNA
          Length = 2055

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 289  gaggaggtggagatcatggaggagg 313
            ||||||| |||||||||||||||||
Sbjct: 1212 gaggaggaggagatcatggaggagg 1236



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>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone
              BACR02I15, complete sequence
          Length = 186490

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 289    gaggaggtggagatcatggaggagg 313
              ||||||| |||||||||||||||||
Sbjct: 162790 gaggaggaggagatcatggaggagg 162814



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>gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone
             BACR23B08, complete sequence
          Length = 161927

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 289   gaggaggtggagatcatggaggagg 313
             ||||||| |||||||||||||||||
Sbjct: 75538 gaggaggaggagatcatggaggagg 75562



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>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete
              sequence
          Length = 308031

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 289    gaggaggtggagatcatggaggagg 313
              ||||||| |||||||||||||||||
Sbjct: 178952 gaggaggaggagatcatggaggagg 178976



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>emb|AJ249493.1|DME249493 Drosophila melanogaster mRNA for hypothetical protein (anon-29Da
           gene) alternatively spliced form
          Length = 1705

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 289 gaggaggtggagatcatggaggagg 313
           ||||||| |||||||||||||||||
Sbjct: 863 gaggaggaggagatcatggaggagg 887



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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 252     ggagagcccgcagccggtggcgtgggac 279
               ||||||||||| ||||||| ||||||||
Sbjct: 1733179 ggagagcccgccgccggtgacgtgggac 1733152



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>ref|XM_529349.1| PREDICTED: Pan troglodytes LOC450763 (LOC450763), mRNA
          Length = 1669

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 atcatggaggaggaaggcggcggc 324
           ||||||||||| ||||||||||||
Sbjct: 570 atcatggaggaagaaggcggcggc 547



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>gb|AC149676.2| Bos taurus  BAC CH240-43C16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 168416

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tagcatagcatagcatagag 125
             ||||||||||||||||||||
Sbjct: 27203 tagcatagcatagcatagag 27222



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>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence
          Length = 171004

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    gctagcatagcatagcatag 123
              ||||||||||||||||||||
Sbjct: 163267 gctagcatagcatagcatag 163286



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>gb|AC150881.4| Bos taurus  BAC CH240-354J15 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 174996

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tagcatagcatagcatagag 125
              ||||||||||||||||||||
Sbjct: 115170 tagcatagcatagcatagag 115189



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>gb|AC149762.2| Bos taurus  BAC CH240-123C23 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 187366

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    tagcatagcatagcatagag 125
              ||||||||||||||||||||
Sbjct: 128479 tagcatagcatagcatagag 128460



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>ref|XM_863353.1| PREDICTED: Canis familiaris hypothetical protein LOC611621
           (LOC611621), mRNA
          Length = 714

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 tggaggtggcggtggagagc 258
           ||||||||||||||||||||
Sbjct: 93  tggaggtggcggtggagagc 74



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>emb|CR956423.7| Pig DNA sequence from clone CH242-20D9 on chromosome 6, complete
             sequence
          Length = 69319

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tagagagaagatctttagca 219
             ||||||||||||||||||||
Sbjct: 65509 tagagagaagatctttagca 65528



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>gb|AC146777.27| Medicago truncatula clone mth2-173c10, complete sequence
          Length = 121026

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 287    gggaggaggtggagatcatggaggagga 314
              |||||||| ||||||| |||||||||||
Sbjct: 107505 gggaggagatggagatgatggaggagga 107478



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>gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete sequence
          Length = 127300

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   gtggagatcatggaggagga 314
             ||||||||||||||||||||
Sbjct: 89497 gtggagatcatggaggagga 89516



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>emb|AL136967.5| Human DNA sequence from clone RP1-149M18 on chromosome 6 Contains the
             NCR2 gene for natural cytotoxicity triggering receptor 2
             and four CpG islands, complete sequence
          Length = 115295

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ggagatcatggaggaggaag 316
             ||||||||||||||||||||
Sbjct: 18457 ggagatcatggaggaggaag 18476



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>emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16 on chromosome 1p36.13, complete
              sequence
          Length = 134506

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    gggcagagcagagcaggacc 194
              ||||||||||||||||||||
Sbjct: 125223 gggcagagcagagcaggacc 125204



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>emb|BX548154.1|CNS09SBK clone A24K23, A41I8 of Tetraodon nigroviridis
          Length = 265677

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  ggtggcggtggagagcccgcagcc 266
            |||||||||||||||||| |||||
Sbjct: 7397 ggtggcggtggagagccctcagcc 7420



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>emb|BX572609.1|CNS09SBP Tetraodon nigroviridis BAC sequence
          Length = 265677

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  ggtggcggtggagagcccgcagcc 266
            |||||||||||||||||| |||||
Sbjct: 7397 ggtggcggtggagagccctcagcc 7420



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>gb|AC112657.2| Homo sapiens X BAC RP11-647I17 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 116810

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  tagcatagcatagcatagag 125
            ||||||||||||||||||||
Sbjct: 5067 tagcatagcatagcatagag 5048



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>gb|AC160655.2| Pan troglodytes BAC clone CH251-26F13 from chromosome unknown, complete
              sequence
          Length = 197508

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ggagatcatggaggaggaag 316
              ||||||||||||||||||||
Sbjct: 171308 ggagatcatggaggaggaag 171289



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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 271     gcgtgggaccagttcaggga 290
               ||||||||||||||||||||
Sbjct: 3510063 gcgtgggaccagttcaggga 3510044



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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 246    ggcggtggagagcccgcagccggtggcg 273
              |||||||| |||||||||||||| ||||
Sbjct: 175009 ggcggtggcgagcccgcagccggcggcg 174982



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      tagcatagcatagcatagag 125
                ||||||||||||||||||||
Sbjct: 19396218 tagcatagcatagcatagag 19396237



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>gb|AC007472.6|AC007472 Drosophila melanogaster, chromosome 2R, region 49E-49F, BAC clone
              BACR30D19, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    gaggtggcggtggagagccc 260
              ||||||||||||||||||||
Sbjct: 150183 gaggtggcggtggagagccc 150202



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>gb|AF200339.1|AF200339 Gallus gallus cone-type transducin alpha subunit mRNA, complete cds
          Length = 1614

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 gaggatgatggaggtggcgg 250
           ||||||||||||||||||||
Sbjct: 921 gaggatgatggaggtggcgg 902



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>ref|NM_204690.1| Gallus gallus cone-type transducin alpha subunit (LOC395425), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 231 gaggatgatggaggtggcgg 250
           ||||||||||||||||||||
Sbjct: 921 gaggatgatggaggtggcgg 902



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    ggtggcggtggagagcccgc 262
              ||||||||||||||||||||
Sbjct: 310827 ggtggcggtggagagcccgc 310846



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>gb|AC160057.2| Pan troglodytes BAC clone CH251-416M4 from chromosome unknown, complete
              sequence
          Length = 168684

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    ggagatcatggaggaggaag 316
              ||||||||||||||||||||
Sbjct: 125550 ggagatcatggaggaggaag 125569



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>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0438E12
          Length = 146851

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tagcatagcatagcatagag 125
              ||||||||||||||||||||
Sbjct: 100991 tagcatagcatagcatagag 101010



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>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0410C01
          Length = 138424

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tagcatagcatagcatagag 125
             ||||||||||||||||||||
Sbjct: 14627 tagcatagcatagcatagag 14646



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>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence
          Length = 171368

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gggcagagcagagcaggacc 194
             ||||||||||||||||||||
Sbjct: 20750 gggcagagcagagcaggacc 20769



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>dbj|AK102224.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087M22, full
            insert sequence
          Length = 2187

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  tagcatagcatagcatagag 125
            ||||||||||||||||||||
Sbjct: 2014 tagcatagcatagcatagag 1995



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>ref|NM_211443.1| Eremothecium gossypii AGL286Cp (AGL286C), mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 246 ggcggtggagagcccgcagccggtggcg 273
           |||||||| |||||||||||||| ||||
Sbjct: 519 ggcggtggcgagcccgcagccggcggcg 546



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>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete
              sequence
          Length = 263912

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    gaggtggcggtggagagccc 260
              ||||||||||||||||||||
Sbjct: 219395 gaggtggcggtggagagccc 219414



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>emb|CR942525.2| Xenopus tropicalis finished cDNA, clone TEgg062a19
          Length = 3164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 283  ttcagggaggaggtggagatcatggagg 310
            ||||||| | ||||||||||||||||||
Sbjct: 1031 ttcagggtgaaggtggagatcatggagg 1004



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>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b,
             complete sequence
          Length = 43428

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   gatgatggaggtggcggtgg 253
             ||||||||||||||||||||
Sbjct: 21074 gatgatggaggtggcggtgg 21055



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>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete
             sequence
          Length = 142263

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gctagcatagcatagcatag 123
             ||||||||||||||||||||
Sbjct: 39453 gctagcatagcatagcatag 39472



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>emb|AL627105.13| Mouse DNA sequence from clone RP23-383D12 on chromosome 4, complete
             sequence
          Length = 190882

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gacctaggctagagagaaga 210
             ||||||||||||||||||||
Sbjct: 70799 gacctaggctagagagaaga 70780



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>dbj|AB028186.1| Oryza sativa mRNA for OsNAC7 protein, complete cds
          Length = 1179

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  tagcatagcatagcatagag 125
            ||||||||||||||||||||
Sbjct: 1125 tagcatagcatagcatagag 1106


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,620,207
Number of Sequences: 3902068
Number of extensions: 3620207
Number of successful extensions: 87042
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86780
Number of HSP's gapped (non-prelim): 262
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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