Clone Name | bastl40a12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HDC_HUMAN (Q9UBI9) Headcase protein homolog (hHDC) | 32 | 0.49 | 2 | YHL1_EBV (P03181) Hypothetical protein BHLF1 | 29 | 4.2 |
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>HDC_HUMAN (Q9UBI9) Headcase protein homolog (hHDC)| Length = 543 Score = 32.0 bits (71), Expect = 0.49 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +1 Query: 4 AAGSPGAPARLGASSIGVGAATRVGAPPYPAAGRIRPES 120 AAG+PGA GA G GAA A AAG + E+ Sbjct: 54 AAGAPGAGGAAGAGGAGTGAANAAAAAGAAAAGDAKNEA 92
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 28.9 bits (63), Expect = 4.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 13 SPGAPARLGASSIGVGAATRVGAPPYPAAG 102 +PGAP A G GAA GA P+P G Sbjct: 563 APGAPGTPAAPGPGGGAAVPSGATPHPERG 592 Score = 28.9 bits (63), Expect = 4.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 13 SPGAPARLGASSIGVGAATRVGAPPYPAAG 102 +PGAP A G GAA GA P+P G Sbjct: 438 APGAPGTPAAPGPGGGAAVPSGATPHPERG 467 Score = 28.9 bits (63), Expect = 4.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 13 SPGAPARLGASSIGVGAATRVGAPPYPAAG 102 +PGAP A G GAA GA P+P G Sbjct: 313 APGAPGTPAAPGPGGGAAVPSGATPHPERG 342 Score = 28.9 bits (63), Expect = 4.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 13 SPGAPARLGASSIGVGAATRVGAPPYPAAG 102 +PGAP A G GAA GA P+P G Sbjct: 188 APGAPGTPAAPGPGGGAAVPSGATPHPERG 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.131 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,762,436 Number of Sequences: 219361 Number of extensions: 203746 Number of successful extensions: 1031 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1030 length of database: 80,573,946 effective HSP length: 16 effective length of database: 77,064,170 effective search space used: 1849540080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)