Clone Name | bastl40a08 |
---|---|
Clone Library Name | barley_pub |
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD| delta) Length = 868 Score = 77.4 bits (189), Expect = 2e-14 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 12/91 (13%) Frame = +3 Query: 210 LLLHGDLDIQIVEAKCLPNMDLMTERIRKCFTGYGACRTNCGNSNTKP------------ 353 +LLHGDLD++IV+A+ LPNMD+ +E +R+ FT AC + P Sbjct: 10 MLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDKNIR 69 Query: 354 DVRKIITSDPYVSVCLSGATVAXTRVINNSE 446 RK+ITSDPYV+V + AT+A TRV+ NS+ Sbjct: 70 SHRKVITSDPYVTVVVPQATLARTRVLKNSQ 100
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 62.4 bits (150), Expect = 5e-10 Identities = 37/78 (47%), Positives = 48/78 (61%) Frame = +3 Query: 213 LLHGDLDIQIVEAKCLPNMDLMTERIRKCFTGYGACRTNCGNSNTKPDVRKIITSDPYVS 392 LLHG+LDI + EAK LPNMD R+ +G G + G ++K ITSDPYV+ Sbjct: 39 LLHGNLDIWVKEAKHLPNMDGFHNRLGGMLSGLGRKKVE-GEKSSK------ITSDPYVT 91 Query: 393 VCLSGATVAXTRVINNSE 446 V +SGA + T VI+NSE Sbjct: 92 VSISGAVIGRTFVISNSE 109
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 61.6 bits (148), Expect = 9e-10 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 4/97 (4%) Frame = +3 Query: 168 PHTMGKHAAETGTS----LLLHGDLDIQIVEAKCLPNMDLMTERIRKCFTGYGACRTNCG 335 PH+ G H G + LLLHG+LDI + A LPN+DL + + F G Sbjct: 95 PHSPGMHIVPFGKASLKVLLLHGNLDIWVSCANNLPNLDLFHKTLGVVFGGM-------- 146 Query: 336 NSNTKPDVRKIITSDPYVSVCLSGATVAXTRVINNSE 446 + + + K ITSDPYVS+ ++GA + T VI+NSE Sbjct: 147 TNMIEGQLSKKITSDPYVSISVAGAVIGRTYVISNSE 183
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 57.8 bits (138), Expect = 1e-08 Identities = 36/79 (45%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Frame = +3 Query: 213 LLHGDLDIQIVEAKCLPNMD-LMTERIRKCFTGYGACRTNCGNSNTKPDVRKIITSDPYV 389 LLHG+LDI + EAK LPNMD + F G G N+ ITSDPYV Sbjct: 43 LLHGNLDIWVKEAKHLPNMDGFHNTLVGGMFFGLGRRNHKVDGENSSK-----ITSDPYV 97 Query: 390 SVCLSGATVAXTRVINNSE 446 +V +SGA + T VI+NSE Sbjct: 98 TVSISGAVIGRTFVISNSE 116
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 52.8 bits (125), Expect = 4e-07 Identities = 32/79 (40%), Positives = 43/79 (54%) Frame = +3 Query: 210 LLLHGDLDIQIVEAKCLPNMDLMTERIRKCFTGYGACRTNCGNSNTKPDVRKIITSDPYV 389 LL HG+LDI I AK LPNMD+ + + F + + ITSDPYV Sbjct: 152 LLSHGNLDIWIYHAKNLPNMDMFHKTLGDMFGRLPG--------KIEGQLTSKITSDPYV 203 Query: 390 SVCLSGATVAXTRVINNSE 446 SV ++GA + T V++NSE Sbjct: 204 SVSVAGAVIGRTYVMSNSE 222
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 35.8 bits (81), Expect = 0.053 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +3 Query: 372 TSDPYVSVCLSGATVAXTRVINNSE 446 TSDPYV+V +SGA + T VI+NSE Sbjct: 51 TSDPYVTVSISGAVIGRTFVISNSE 75
>TOB1_MOUSE (Q61471) Tob1 protein (Transducer of erbB-2 1)| Length = 363 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -1 Query: 401 EANRNIRITSNDLPHVWFCVRIPAVSPTSTIASEAFPDPFGHEIHIGKTF 252 E ++ I+ + N P V+ +P P S+++S P PFGH + TF Sbjct: 123 ELDKEIKNSFNPEPQVF----MPISDPASSVSSSPSP-PFGHSAAVSPTF 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,459,318 Number of Sequences: 219361 Number of extensions: 1286428 Number of successful extensions: 2902 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2839 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2897 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)