Clone Name | bastl40a06 |
---|---|
Clone Library Name | barley_pub |
>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor| [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase); Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase)] Length = 654 Score = 31.2 bits (69), Expect = 0.83 Identities = 14/23 (60%), Positives = 19/23 (82%) Frame = +3 Query: 51 ASARARDLVSRLTLAEKVGFLVN 119 A+ RA DLVSR+TLAEK G +++ Sbjct: 65 AAERAADLVSRMTLAEKAGVMMH 87
>GNRHR_SHEEP (P32237) Gonadotropin-releasing hormone receptor (GnRH receptor)| (GnRH-R) Length = 328 Score = 27.7 bits (60), Expect = 9.2 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 122 LVHQEPHLLRQRQPRHQVPGARRR 51 ++HQ+PH L+ Q ++ +P AR R Sbjct: 241 VLHQDPHKLQLNQSKNNIPQARLR 264
>GNRHR_HORSE (O18821) Gonadotropin-releasing hormone receptor (GnRH receptor)| (GnRH-R) Length = 328 Score = 27.7 bits (60), Expect = 9.2 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 122 LVHQEPHLLRQRQPRHQVPGARRR 51 ++HQ+PH L+ Q ++ +P AR R Sbjct: 241 VLHQDPHKLQLNQSKNNIPRARLR 264
>GNRHR_BOVIN (P32236) Gonadotropin-releasing hormone receptor (GnRH receptor)| (GnRH-R) Length = 328 Score = 27.7 bits (60), Expect = 9.2 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 122 LVHQEPHLLRQRQPRHQVPGARRR 51 ++HQ+PH L+ Q ++ +P AR R Sbjct: 241 VLHQDPHKLQLNQSKNNIPRARLR 264
>FPRP_MOUSE (Q9WV91) Prostaglandin F2 receptor negative regulator precursor| (Prostaglandin F2-alpha receptor regulatory protein) (Prostaglandin F2-alpha receptor-associated protein) (CD315 antigen) Length = 879 Score = 27.7 bits (60), Expect = 9.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 115 TRNPTFSASVSRDTRSLARADAV 47 T PTF+ASV DT S+ R D + Sbjct: 685 TSGPTFNASVHSDTPSVTRGDLI 707 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,307,452 Number of Sequences: 219361 Number of extensions: 171225 Number of successful extensions: 1002 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 954 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 999 length of database: 80,573,946 effective HSP length: 19 effective length of database: 76,406,087 effective search space used: 1833746088 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)