ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl40a06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase isoenzyme ARA-I mRNA, complete cds Length = 2647 Score = 248 bits (125), Expect = 3e-63 Identities = 131/133 (98%) Strand = Plus / Plus Query: 1 cgtcgaacgcgacgctggcggcctacgggttctgcaaccgggaggcgacggcgtcggcgc 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 171 cgtcgaacgcgacgctggcggcctacgggttctgcaaccggaaggcgacggcgtcggcgc 230 Query: 61 gcgccagggacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaaca 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 gcgccagggacctagtgtcgcggctgacgctggcggagaaggtggggttcctggtgaaca 290 Query: 121 agcagccggcgct 133 ||||||||||||| Sbjct: 291 agcagccggcgct 303
>ref|XM_474061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2298 Score = 95.6 bits (48), Expect = 3e-17 Identities = 51/52 (98%) Strand = Plus / Plus Query: 82 ggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 185 ggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgct 236
>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01, complete sequence Length = 153643 Score = 95.6 bits (48), Expect = 3e-17 Identities = 51/52 (98%) Strand = Plus / Minus Query: 82 ggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 148184 ggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgct 148133
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 95.6 bits (48), Expect = 3e-17 Identities = 51/52 (98%) Strand = Plus / Minus Query: 82 ggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 24471 ggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgct 24420
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 3e-17 Identities = 51/52 (98%) Strand = Plus / Minus Query: 82 ggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 32629450 ggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgct 32629399 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 ggcgacggcgtcggcgcgcgccagg 68 |||||||||||||||| |||||||| Sbjct: 1768015 ggcgacggcgtcggcgagcgccagg 1767991
>dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065A06, full insert sequence Length = 2821 Score = 95.6 bits (48), Expect = 3e-17 Identities = 51/52 (98%) Strand = Plus / Plus Query: 82 ggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 353 ggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgct 404
>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete sequence Length = 50928 Score = 95.6 bits (48), Expect = 3e-17 Identities = 51/52 (98%) Strand = Plus / Minus Query: 82 ggctgacgctggcggagaaggtggggttcctggtgaacaagcagccggcgct 133 |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2880 ggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgct 2829
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||||||||||||||| |||||||||||||| Sbjct: 86145 ggacctggtgtcgcggctgacggcggcggagaaggtgg 86182
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10 map E20933S, complete sequence Length = 146118 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||||||||||||||| |||||||||||||| Sbjct: 138627 ggacctggtgtcgcggctgacggcggcggagaaggtgg 138590
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||||||||||||||| |||||||||||||| Sbjct: 10514781 ggacctggtgtcgcggctgacggcggcggagaaggtgg 10514744 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 69 gacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaa 121 ||||||||| |||||||||||| || ||||||||| || | ||||||||||| Sbjct: 26347093 gacctggtggcgcggctgacgcgcgccgagaaggtgcggctgctggtgaacaa 26347041 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 107 |||||||||| || |||||||| |||||||||||||||| Sbjct: 10834573 ggacctggtggcgaggctgacgacggcggagaaggtgggg 10834612 Score = 44.1 bits (22), Expect = 0.10 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||| || |||||||| |||||||||||||| Sbjct: 10871703 ggacctggtggcgaggctgacggcggcggagaaggtgg 10871740 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gaggcgacggcgtcggcgcg 61 |||||||||||||||||||| Sbjct: 26032200 gaggcgacggcgtcggcgcg 26032181
>dbj|AK108558.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A01, full insert sequence Length = 1199 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||||||||||||||| |||||||||||||| Sbjct: 202 ggacctggtgtcgcggctgacggcggcggagaaggtgg 239
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||||||||||||||| |||||||||||||| Sbjct: 10586325 ggacctggtgtcgcggctgacggcggcggagaaggtgg 10586288 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 69 gacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaa 121 ||||||||| |||||||||||| || ||||||||| || | ||||||||||| Sbjct: 26660821 gacctggtggcgcggctgacgcgcgccgagaaggtgcggctgctggtgaacaa 26660769 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 107 |||||||||| || |||||||| |||||||||||||||| Sbjct: 10913762 ggacctggtggcgaggctgacgacggcggagaaggtgggg 10913801 Score = 44.1 bits (22), Expect = 0.10 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||| || |||||||| |||||||||||||| Sbjct: 10950892 ggacctggtggcgaggctgacggcggcggagaaggtgg 10950929 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gaggcgacggcgtcggcgcg 61 |||||||||||||||||||| Sbjct: 26350896 gaggcgacggcgtcggcgcg 26350877
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Minus Query: 69 gacctggtgtcgcggctgacgctggcggagaaggtggggttcctggtgaacaa 121 ||||||||| |||||||||||| || ||||||||| || | ||||||||||| Sbjct: 48395 gacctggtggcgcggctgacgcgcgccgagaaggtgcggctgctggtgaacaa 48343
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 107 |||||||||| || |||||||| |||||||||||||||| Sbjct: 24093 ggacctggtggcgaggctgacgacggcggagaaggtgggg 24132 Score = 44.1 bits (22), Expect = 0.10 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||| || |||||||| |||||||||||||| Sbjct: 61223 ggacctggtggcgaggctgacggcggcggagaaggtgg 61260
>dbj|AK070171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O20, full insert sequence Length = 2515 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgggg 107 |||||||||| || |||||||| |||||||||||||||| Sbjct: 232 ggacctggtggcgaggctgacgacggcggagaaggtgggg 271
>dbj|AK109882.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D05, full insert sequence Length = 2714 Score = 44.1 bits (22), Expect = 0.10 Identities = 34/38 (89%) Strand = Plus / Plus Query: 68 ggacctggtgtcgcggctgacgctggcggagaaggtgg 105 |||||||||| || |||||||| |||||||||||||| Sbjct: 246 ggacctggtggcgaggctgacggcggcggagaaggtgg 283
>ref|XM_471136.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1455 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 ggcgacggcgtcggcgcgcgccagg 68 |||||||||||||||| |||||||| Sbjct: 463 ggcgacggcgtcggcgagcgccagg 487
>ref|XM_467832.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2628 Score = 42.1 bits (21), Expect = 0.40 Identities = 30/33 (90%) Strand = Plus / Plus Query: 69 gacctggtgtcgcggctgacgctggcggagaag 101 ||||| |||||| |||||||||||| ||||||| Sbjct: 219 gacctcgtgtcgaggctgacgctggaggagaag 251
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 cgtcgaacgcgacgctggcgg 21 ||||||||||||||||||||| Sbjct: 2070828 cgtcgaacgcgacgctggcgg 2070808 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 73 tggtgtcgcggctgacgctggcg 95 ||||||||| ||||||||||||| Sbjct: 2272337 tggtgtcgccgctgacgctggcg 2272315
>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete sequence Length = 149449 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 ggcgacggcgtcggcgcgcgccagg 68 |||||||||||||||| |||||||| Sbjct: 110967 ggcgacggcgtcggcgagcgccagg 110943
>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09, complete sequence Length = 155672 Score = 42.1 bits (21), Expect = 0.40 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 ggcgacggcgtcggcgcgcgccagg 68 |||||||||||||||| |||||||| Sbjct: 63282 ggcgacggcgtcggcgagcgccagg 63258
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.40 Identities = 30/33 (90%) Strand = Plus / Minus Query: 69 gacctggtgtcgcggctgacgctggcggagaag 101 ||||| |||||| |||||||||||| ||||||| Sbjct: 31632444 gacctcgtgtcgaggctgacgctggaggagaag 31632412
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 aaccgggaggcgacggcgtcg 56 ||||||||||||||||||||| Sbjct: 448414 aaccgggaggcgacggcgtcg 448394 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaccgggaggcgacggcgtcg 56 ||||||||||||||||||||| Sbjct: 377599 aaccgggaggcgacggcgtcg 377619 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaccgggaggcgacggcgtcg 56 ||||||||||||||||||||| Sbjct: 272734 aaccgggaggcgacggcgtcg 272754 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 aaccgggaggcgacggcgtcg 56 ||||||||||||||||||||| Sbjct: 117062 aaccgggaggcgacggcgtcg 117082
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 ggcgacggcgtcggcgcgcgc 64 ||||||||||||||||||||| Sbjct: 1575787 ggcgacggcgtcggcgcgcgc 1575767 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggcgacggcgtcggcgcgcg 63 |||||||||||||||||||| Sbjct: 1259966 ggcgacggcgtcggcgcgcg 1259985 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 ccgggaggcgacggcgtcg 56 ||||||||||||||||||| Sbjct: 1955747 ccgggaggcgacggcgtcg 1955765
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 42.1 bits (21), Expect = 0.40 Identities = 30/33 (90%) Strand = Plus / Minus Query: 69 gacctggtgtcgcggctgacgctggcggagaag 101 ||||| |||||| |||||||||||| ||||||| Sbjct: 123004 gacctcgtgtcgaggctgacgctggaggagaag 122972
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 42.1 bits (21), Expect = 0.40 Identities = 30/33 (90%) Strand = Plus / Minus Query: 69 gacctggtgtcgcggctgacgctggcggagaag 101 ||||| |||||| |||||||||||| ||||||| Sbjct: 12231 gacctcgtgtcgaggctgacgctggaggagaag 12199
>dbj|AK119887.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-H05, full insert sequence Length = 2628 Score = 42.1 bits (21), Expect = 0.40 Identities = 30/33 (90%) Strand = Plus / Plus Query: 69 gacctggtgtcgcggctgacgctggcggagaag 101 ||||| |||||| |||||||||||| ||||||| Sbjct: 219 gacctcgtgtcgaggctgacgctggaggagaag 251
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 cggcgcgcgccagggacctgg 75 ||||||||||||||||||||| Sbjct: 1531109 cggcgcgcgccagggacctgg 1531129
>ref|XM_462821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 40.1 bits (20), Expect = 1.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 77 gtcgcggctgacgctggcggagaaggtggggt 108 |||||||| ||||| | ||||||||||||||| Sbjct: 210 gtcgcggcggacgcagccggagaaggtggggt 179
>ref|XM_483085.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 591 ggaggcgacggcgacggcgcgcgc 568
>ref|XM_479893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2115 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 663 ggaggcgacggcggcggcgcgcgc 686
>ref|NM_001024618.1| Mus musculus cardiomyopathy associated 3 (Cmya3), mRNA Length = 11956 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tggggttcctggtgaacaag 122 |||||||||||||||||||| Sbjct: 9078 tggggttcctggtgaacaag 9059
>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0024E08, complete sequence Length = 131946 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gaggcgacggcgtcggcgcg 61 |||||||||||||||||||| Sbjct: 55767 gaggcgacggcgtcggcgcg 55748
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 1.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 ccgggaggcgacggcgtcggcgcgcgcc 65 ||||||||||||| |||||||| ||||| Sbjct: 172366 ccgggaggcgacgtcgtcggcgggcgcc 172393
>gb|AY043236.1| Vitis vinifera putative cellulase CEL1 mRNA, partial cds Length = 413 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 agaaggtggggttcctggtg 116 |||||||||||||||||||| Sbjct: 42 agaaggtggggttcctggtg 23
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gctggcggagaaggtggggt 108 |||||||||||||||||||| Sbjct: 2332609 gctggcggagaaggtggggt 2332590
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gtcgcggctgacgctggcgg 96 |||||||||||||||||||| Sbjct: 2135485 gtcgcggctgacgctggcgg 2135466
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 24218566 ggaggcgacggcgacggcgcgcgc 24218543 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 1510552 ggaggcgacggcggcggcgcgcgc 1510529 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 accgggaggcgacggcgtcggcg 59 |||||||||||||| |||||||| Sbjct: 10517733 accgggaggcgacgacgtcggcg 10517711
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 1.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 77 gtcgcggctgacgctggcggagaaggtggggt 108 |||||||| ||||| | ||||||||||||||| Sbjct: 3691496 gtcgcggcggacgcagccggagaaggtggggt 3691527 Score = 38.2 bits (19), Expect = 6.3 Identities = 34/39 (87%) Strand = Plus / Plus Query: 67 gggacctggtgtcgcggctgacgctggcggagaaggtgg 105 ||||||| ||| |||| ||||||||| ||||||||||| Sbjct: 10869772 gggacctcgtggggcggatgacgctggaggagaaggtgg 10869810
>gb|DQ011666.1| Mus musculus XIN2 (Xin2) mRNA, complete cds Length = 11956 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tggggttcctggtgaacaag 122 |||||||||||||||||||| Sbjct: 9078 tggggttcctggtgaacaag 9059
>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0583G08 Length = 135295 Score = 40.1 bits (20), Expect = 1.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 77 gtcgcggctgacgctggcggagaaggtggggt 108 |||||||| ||||| | ||||||||||||||| Sbjct: 99976 gtcgcggcggacgcagccggagaaggtggggt 100007
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 cgacggcgtcggcgcgcgcc 65 |||||||||||||||||||| Sbjct: 2643606 cgacggcgtcggcgcgcgcc 2643625
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 84905 ggaggcgacggcgacggcgcgcgc 84882
>emb|AL929411.11| Mouse DNA sequence from clone RP23-353O20 on chromosome 2, complete sequence Length = 149594 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tggggttcctggtgaacaag 122 |||||||||||||||||||| Sbjct: 94122 tggggttcctggtgaacaag 94103
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 38040 ggaggcgacggcggcggcgcgcgc 38017
>dbj|AP004166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1499_A07 Length = 132146 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 120457 ggaggcgacggcggcggcgcgcgc 120434
>dbj|AK100183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J22, full insert sequence Length = 1982 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 590 ggaggcgacggcgacggcgcgcgc 567
>dbj|AK070237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047A01, full insert sequence Length = 1733 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcgc 64 ||||||||||||| |||||||||| Sbjct: 328 ggaggcgacggcgacggcgcgcgc 305
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggcgacggcgtcggcgcgcg 63 |||||||||||||||||||| Sbjct: 1477298 ggcgacggcgtcggcgcgcg 1477279
>ref|XM_531505.1| PREDICTED: Pan troglodytes LOC474057 (LOC474057), mRNA Length = 4476 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 3801 gctgacgctggcggagacggtgg 3823
>ref|XM_531133.1| PREDICTED: Pan troglodytes LOC464178 (LOC464178), mRNA Length = 744 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 574 gctgacgctggcggagaag 556
>ref|NM_183652.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2457 Score = 38.2 bits (19), Expect = 6.3 Identities = 34/39 (87%) Strand = Plus / Plus Query: 67 gggacctggtgtcgcggctgacgctggcggagaaggtgg 105 ||||||| ||| |||| ||||||||| ||||||||||| Sbjct: 227 gggacctcgtggggcggatgacgctggaggagaaggtgg 265
>ref|NM_006657.2| Homo sapiens formiminotransferase cyclodeaminase (FTCD), transcript variant B, mRNA Length = 1921 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1397 gctgacgctggcggagacggtgg 1419
>ref|NM_206965.1| Homo sapiens formiminotransferase cyclodeaminase (FTCD), transcript variant A, mRNA Length = 1884 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1397 gctgacgctggcggagacggtgg 1419
>gb|BC052248.1| Homo sapiens formiminotransferase cyclodeaminase, mRNA (cDNA clone IMAGE:6270063), partial cds Length = 1918 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1393 gctgacgctggcggagacggtgg 1415
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcgcgcg 63 ||||| ||||||||||||||||| Sbjct: 79531 ggaggtgacggcgtcggcgcgcg 79509
>ref|NM_022454.2| Homo sapiens SRY (sex determining region Y)-box 17 (SOX17), mRNA Length = 1853 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 528 gctgacgctggcggagaag 546
>gb|AF466694.1| Rattus norvegicus L-NAME induced actin cytoskeletal protein mRNA, complete cds Length = 12178 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ggggttcctggtgaacaag 122 ||||||||||||||||||| Sbjct: 9099 ggggttcctggtgaacaag 9081
>gb|BC030209.1| Homo sapiens SRY (sex determining region Y)-box 17, mRNA (cDNA clone IMAGE:5220550), containing frame-shift errors Length = 680 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 516 gctgacgctggcggagaag 534
>ref|NM_201989.1| Rattus norvegicus cardiomyopathy associated 3 (Cmya3), mRNA Length = 12178 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ggggttcctggtgaacaag 122 ||||||||||||||||||| Sbjct: 9099 ggggttcctggtgaacaag 9081
>gb|AC008581.11| Homo sapiens chromosome 5 clone CTC-564N23, complete sequence Length = 198564 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 38 ccgggaggcgacggcgtcggcgc 60 |||||||||| |||||||||||| Sbjct: 92585 ccgggaggcgtcggcgtcggcgc 92607
>ref|NM_032367.1| Homo sapiens zinc finger, BED-type containing 3 (ZBED3), mRNA Length = 1438 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 ccgggaggcgacggcgtcggcgc 60 |||||||||| |||||||||||| Sbjct: 363 ccgggaggcgtcggcgtcggcgc 341
>gb|BC111365.1| Homo sapiens SRY (sex determining region Y)-box 17, mRNA (cDNA clone IMAGE:30928303), partial cds Length = 648 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 484 gctgacgctggcggagaag 502
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 79 cgcggctgacgctggcgga 97 ||||||||||||||||||| Sbjct: 477343 cgcggctgacgctggcgga 477361
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 ggcgtcggcgcgcgccagg 68 ||||||||||||||||||| Sbjct: 295947 ggcgtcggcgcgcgccagg 295965
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 gcgtcggcgcgcgccaggg 69 ||||||||||||||||||| Sbjct: 154102 gcgtcggcgcgcgccaggg 154084
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 cggcgtcggcgcgcgccag 67 ||||||||||||||||||| Sbjct: 151568 cggcgtcggcgcgcgccag 151586
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 ggcgtcggcgcgcgccagg 68 ||||||||||||||||||| Sbjct: 233692 ggcgtcggcgcgcgccagg 233710
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 cggcgtcggcgcgcgccag 67 ||||||||||||||||||| Sbjct: 62549 cggcgtcggcgcgcgccag 62567
>gb|BC032037.1| Homo sapiens formiminotransferase cyclodeaminase, mRNA (cDNA clone IMAGE:4825985), complete cds Length = 1272 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 684 gctgacgctggcggagacggtgg 706
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 gcgtcggcgcgcgccaggg 69 ||||||||||||||||||| Sbjct: 77156 gcgtcggcgcgcgccaggg 77138
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 ggcgtcggcgcgcgccagg 68 ||||||||||||||||||| Sbjct: 117793 ggcgtcggcgcgcgccagg 117775
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 80 gcggctgacgctggcggag 98 ||||||||||||||||||| Sbjct: 108581 gcggctgacgctggcggag 108599
>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 158719 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acgctggcggcctacgggt 30 ||||||||||||||||||| Sbjct: 39988 acgctggcggcctacgggt 40006
>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163711 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acgctggcggcctacgggt 30 ||||||||||||||||||| Sbjct: 72912 acgctggcggcctacgggt 72930
>gb|AC091076.7| Homo sapiens chromosome 8, clone RP11-53M11, complete sequence Length = 162374 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 132993 gctgacgctggcggagaag 132975
>gb|BC007239.1| Homo sapiens zinc finger, BED-type containing 3, mRNA (cDNA clone MGC:15435 IMAGE:2906114), complete cds Length = 1438 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 ccgggaggcgacggcgtcggcgc 60 |||||||||| |||||||||||| Sbjct: 363 ccgggaggcgtcggcgtcggcgc 341
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 gcgacggcgtcggcgcgcg 63 ||||||||||||||||||| Sbjct: 26854586 gcgacggcgtcggcgcgcg 26854604 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 aggcgacggcgtcggcgcg 61 ||||||||||||||||||| Sbjct: 10521318 aggcgacggcgtcggcgcg 10521336 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 ggaggcgacggcgtcggcg 59 ||||||||||||||||||| Sbjct: 472363 ggaggcgacggcgtcggcg 472381
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 cggcgtcggcgcgcgccag 67 ||||||||||||||||||| Sbjct: 28464055 cggcgtcggcgcgcgccag 28464073
>dbj|AK223624.1| Homo sapiens mRNA for zinc finger, BED domain containing 3 variant, clone: FCC134F04 Length = 1031 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 ccgggaggcgacggcgtcggcgc 60 |||||||||| |||||||||||| Sbjct: 377 ccgggaggcgtcggcgtcggcgc 355
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 38.2 bits (19), Expect = 6.3 Identities = 34/39 (87%) Strand = Plus / Plus Query: 67 gggacctggtgtcgcggctgacgctggcggagaaggtgg 105 ||||||| ||| |||| ||||||||| ||||||||||| Sbjct: 56788 gggacctcgtggggcggatgacgctggaggagaaggtgg 56826
>ref|XM_579736.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_201989 (LOC497771), mRNA Length = 12047 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 ggggttcctggtgaacaag 122 ||||||||||||||||||| Sbjct: 9099 ggggttcctggtgaacaag 9081
>gb|AF289024.1|AF289024 Homo sapiens formiminotransferase cyclodeaminase form E (FTCD) mRNA, complete cds Length = 1930 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1422 gctgacgctggcggagacggtgg 1444
>gb|AF289023.1|AF289023 Homo sapiens formiminotransferase cyclodeaminase form D (FTCD) mRNA, complete cds Length = 1831 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1353 gctgacgctggcggagacggtgg 1375
>gb|AF289022.1|AF289022 Homo sapiens formiminotransferase cyclodeaminase form C (FTCD) mRNA, complete cds Length = 1948 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1397 gctgacgctggcggagacggtgg 1419
>gb|AF289021.1|AF289021 Homo sapiens formiminotransferase cyclodeaminase form B (FTCD) mRNA, complete cds Length = 1900 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1397 gctgacgctggcggagacggtgg 1419
>gb|AF169017.1|AF169017 Homo sapiens formiminotransferase cyclodeaminase (FTCD) mRNA, complete cds Length = 1875 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1397 gctgacgctggcggagacggtgg 1419
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 gctggcggcctacgggttc 32 ||||||||||||||||||| Sbjct: 5969143 gctggcggcctacgggttc 5969161
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 cggcgtcggcgcgcgccag 67 ||||||||||||||||||| Sbjct: 71088 cggcgtcggcgcgcgccag 71106
>dbj|BS000241.1| Pan troglodytes chromosome 22 clone:PTB-110J21, map 22, complete sequences Length = 102671 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 32923 gctgacgctggcggagacggtgg 32901
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0053M06 Length = 175416 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 accgggaggcgacggcgtcggcg 59 |||||||||||||| |||||||| Sbjct: 140324 accgggaggcgacgacgtcggcg 140302
>dbj|AP004130.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_B05 Length = 121853 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 37 accgggaggcgacggcgtcggcg 59 |||||||||||||| |||||||| Sbjct: 37201 accgggaggcgacgacgtcggcg 37179
>dbj|AK025905.1| Homo sapiens cDNA: FLJ22252 fis, clone HRC02734 Length = 1853 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 528 gctgacgctggcggagaag 546
>emb|AJ325199.1|HSA325199 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FJ19C Length = 474 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 25 gctgacgctggcggagaag 7
>emb|AJ325198.1|HSA325198 Homo sapiens genomic sequence surrounding NotI site, clone NL1-EH21C Length = 591 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 186 gctgacgctggcggagaag 168
>emb|AJ329080.1|HSA329080 Homo sapiens genomic sequence surrounding NotI site, clone NL1-HJ17R Length = 847 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 174 gctgacgctggcggagaag 156
>dbj|AK070430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048H06, full insert sequence Length = 711 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 cggcgtcggcgcgcgccag 67 ||||||||||||||||||| Sbjct: 316 cggcgtcggcgcgcgccag 298
>emb|AL109817.1|IRO125195 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 125195 Length = 1326 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 666 gctgacgctggcggagacggtgg 688
>gb|U91541.1|HSU91541 Human formiminotransferase cyclodeaminase (ftcd) mRNA, partial cds Length = 660 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 168 gctgacgctggcggagacggtgg 190
>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete sequence Length = 297381 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 acgctggcggcctacgggt 30 ||||||||||||||||||| Sbjct: 41138 acgctggcggcctacgggt 41156
>dbj|AP001473.2| Homo sapiens genomic DNA, chromosome 21 clone:CMF21-116A16, complete sequence Length = 4929 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 1913 gctgacgctggcggagacggtgg 1891
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 83 gctgacgctggcggagaaggtgg 105 ||||||||||||||||| ||||| Sbjct: 156326 gctgacgctggcggagacggtgg 156304
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 acgctggcggagaaggtgg 105 ||||||||||||||||||| Sbjct: 452852 acgctggcggagaaggtgg 452870
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 gcgacggcgtcggcgcgcg 63 ||||||||||||||||||| Sbjct: 26782756 gcgacggcgtcggcgcgcg 26782774 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 aggcgacggcgtcggcgcg 61 ||||||||||||||||||| Sbjct: 10521200 aggcgacggcgtcggcgcg 10521218 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 ggaggcgacggcgtcggcg 59 ||||||||||||||||||| Sbjct: 472363 ggaggcgacggcgtcggcg 472381
>emb|AL772421.5|CNS08C9Z Oryza sativa chromosome 12, . BAC OJ1007_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130672 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 aggcgacggcgtcggcgcg 61 ||||||||||||||||||| Sbjct: 47124 aggcgacggcgtcggcgcg 47142
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 gcgacggcgtcggcgcgcg 63 ||||||||||||||||||| Sbjct: 58553 gcgacggcgtcggcgcgcg 58571
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 ggaggcgacggcgtcggcg 59 ||||||||||||||||||| Sbjct: 74409 ggaggcgacggcgtcggcg 74391
>dbj|AB073988.1| Homo sapiens mRNA for SRY-related HMG-box transcription factor SOX17, complete cds Length = 1657 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 gctgacgctggcggagaag 101 ||||||||||||||||||| Sbjct: 327 gctgacgctggcggagaag 345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 871,221 Number of Sequences: 3902068 Number of extensions: 871221 Number of successful extensions: 68923 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65344 Number of HSP's gapped (non-prelim): 3579 length of query: 133 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 112 effective length of database: 17,151,101,840 effective search space: 1920923406080 effective search space used: 1920923406080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
