>gb|AC132607.4| Mus musculus BAC clone RP23-447F22 from 12, complete sequence
          Length = 194101

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 327   cctgccccgcctctccctccctc 349
             |||||||||||||||||||||||
Sbjct: 19027 cctgccccgcctctccctccctc 19049

>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete
             sequence
          Length = 193547

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 327   cctgccccgcctctccctccctc 349
             |||||||||||||||||||||||
Sbjct: 60716 cctgccccgcctctccctccctc 60694

>emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100H13 on chromosome 20q11.2 Contains
              the 3' end of the gene for a novel protein (KIAA1219), a
              novel gene, a HSPC037 pseudogene, the C20orf95 gene for a
              novel RhoGAP domain-containing protein and two CpG islands,
              complete sequence
          Length = 116792

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    ctgccccgcctctccctccct 348
              |||||||||||||||||||||
Sbjct: 105955 ctgccccgcctctccctccct 105975

>gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, complete sequence
          Length = 202074

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 373   gggtgtgagcaaggaggaggggaag 397
             |||||||||||||||| ||||||||
Sbjct: 48983 gggtgtgagcaaggagaaggggaag 49007

>ref|XM_519995.1| PREDICTED: Pan troglodytes LOC464438 (LOC464438), mRNA
          Length = 1622

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 ttgggtgtgagcaaggaggagggg 394
           ||||||||||||| ||||||||||
Sbjct: 624 ttgggtgtgagcacggaggagggg 601

>gb|AC130838.3| Mus musculus BAC clone RP24-369B4 from chromosome 12, complete sequence
          Length = 149814

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    gcaaggaggaggggaagctc 400
              ||||||||||||||||||||
Sbjct: 112874 gcaaggaggaggggaagctc 112855

>gb|AC005014.2| Homo sapiens BAC clone GS1-166A23 from 7, complete sequence
          Length = 168247

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 326   acctgccccgcctctccctccctc 349
             |||| |||||||||||||||||||
Sbjct: 41720 accttccccgcctctccctccctc 41697

>gb|AY857959.1| Homo sapiens OIP-1 gene, flanking sequence and 5' UTR
          Length = 2340

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 371  ttgggtgtgagcaaggaggagggg 394
            ||||||||||||| ||||||||||
Sbjct: 1957 ttgggtgtgagcacggaggagggg 1934

>gb|AC098479.2| Homo sapiens chromosome 3 clone RP11-80H18, complete sequence
          Length = 178010

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 49   ccccttggtgaggtgaggtgtagc 72
            ||||||||||||| ||||||||||
Sbjct: 1387 ccccttggtgaggcgaggtgtagc 1364

>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown, complete
              sequence
          Length = 182200

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 327    cctgccccgcctctccctcc 346
              ||||||||||||||||||||
Sbjct: 145280 cctgccccgcctctccctcc 145299

>emb|BX935472.2| Gallus gallus finished cDNA, clone ChEST252d5
          Length = 903

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 tgctgggggaggcgggtgag 208
           ||||||||||||||||||||
Sbjct: 89  tgctgggggaggcgggtgag 108

>gb|U66711.1|HSU66711 Human Ly-6-related protein (9804) gene, complete cds
          Length = 5543

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 371 ttgggtgtgagcaaggaggagggg 394
           ||||||||||||| ||||||||||
Sbjct: 816 ttgggtgtgagcacggaggagggg 793

>emb|BX950429.1| Gallus gallus finished cDNA, clone ChEST1013h1
          Length = 915

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 tgctgggggaggcgggtgag 208
           ||||||||||||||||||||
Sbjct: 101 tgctgggggaggcgggtgag 120

>gb|AC137936.3| Homo sapiens chromosome 3 clone RP11-456N14, complete sequence
          Length = 187869

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 49     ccccttggtgaggtgaggtgtagc 72
              ||||||||||||| ||||||||||
Sbjct: 135792 ccccttggtgaggcgaggtgtagc 135769

>gb|AC083982.13| Homo sapiens chromosome 8, clone RP11-520P18, complete sequence
          Length = 173910

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 371   ttgggtgtgagcaaggaggagggg 394
             ||||||||||||| ||||||||||
Sbjct: 28657 ttgggtgtgagcacggaggagggg 28634

>emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chromosome 4, complete
             sequence
          Length = 100102

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 362   ctcctgaccttgggtgtgagcaaggagg 389
             ||||||||| |||||| |||||||||||
Sbjct: 28478 ctcctgaccctgggtgagagcaaggagg 28451

>gb|AC147360.5| Mus musculus BAC clone RP24-241D11 from chromosome 12, complete sequence
          Length = 160968

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 381    gcaaggaggaggggaagctc 400
              ||||||||||||||||||||
Sbjct: 160641 gcaaggaggaggggaagctc 160660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,376,581
Number of Sequences: 3902068
Number of extensions: 3376581
Number of successful extensions: 63354
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63324
Number of HSP's gapped (non-prelim): 30
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)