ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39h11 |
|---|---|
| Clone Library Name | barley_pub |
>ZSWM5_HUMAN (Q9P217) Zinc finger SWIM domain-containing protein 5| Length = 1185 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/47 (40%), Positives = 24/47 (51%) Frame = +1 Query: 148 GQAGEAPALAVVIPQPPLASAPATESPHGQGSQDLTGVGGGTSAISC 288 G AG +PA P PP A+APA +P G + G+G G A C Sbjct: 128 GAAGASPAEEGPQP-PPGAAAPAGSAPGGVAAGASPGLGAGAGAAGC 173
>ZSWM5_MOUSE (Q80TC6) Zinc finger SWIM domain-containing protein 5| Length = 1188 Score = 32.0 bits (71), Expect = 0.36 Identities = 18/47 (38%), Positives = 25/47 (53%) Frame = +1 Query: 145 SGQAGEAPALAVVIPQPPLASAPATESPHGQGSQDLTGVGGGTSAIS 285 +G AG +P + P PP A+APA +P G+ G+G GT S Sbjct: 127 AGAAGASP-VEEGPPPPPGAAAPAGSAPGAAGAGSSPGLGAGTGTAS 172
>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)| [Contains: Transforming protein Int-3; Notch 4 extracellular truncation; Notch 4 intracellular domain] Length = 1964 Score = 32.0 bits (71), Expect = 0.36 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -3 Query: 177 SQSRRFPRLAADSVTRSSLRPPAAGPAVSMLAVQPNMLAEPRRRAPSLCWGL 22 S+ RR R + D R + A G A S P++ P R +P + WGL Sbjct: 1897 SRGRRGARASQDDWPRDWVALEACGSACSAPIPPPSLTPSPERGSPQVAWGL 1948
>SF01_MOUSE (Q64213) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (mZFM) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) (CW17) Length = 653 Score = 31.6 bits (70), Expect = 0.48 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 14/80 (17%) Frame = -1 Query: 296 P*SQEMADVPPPTP----VRSCDPWPWGLSV------AGAEARGGWGITTARAGASPAWP 147 P Q+ PPP P + S P PW + AG + W A A ASP P Sbjct: 499 PWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGTP 558 Query: 146 LIQSRAQ----ASGLRPPAP 99 +Q G++PP P Sbjct: 559 QMQGNPTMVPLPPGVQPPLP 578
>SF01_HUMAN (Q15637) Splicing factor 1 (Zinc finger protein 162) (Transcription| factor ZFM1) (Zinc finger gene in MEN1 locus) (Mammalian branch point-binding protein mBBP) (BBP) Length = 639 Score = 31.2 bits (69), Expect = 0.62 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 14/80 (17%) Frame = -1 Query: 296 P*SQEMADVPPPTP----VRSCDPWPWGLSV------AGAEARGGWGITTARAGASPAWP 147 P Q+ PPP P + S P PW + AG + W A A ASP P Sbjct: 499 PWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQAAAAASPGAP 558 Query: 146 LIQSRAQ----ASGLRPPAP 99 +Q G++PP P Sbjct: 559 QMQGNPTMVPLPPGVQPPLP 578
>ZN341_HUMAN (Q9BYN7) Zinc finger protein 341| Length = 854 Score = 30.8 bits (68), Expect = 0.81 Identities = 18/58 (31%), Positives = 25/58 (43%) Frame = -1 Query: 272 VPPPTPVRSCDPWPWGLSVAGAEARGGWGITTARAGASPAWPLIQSRAQASGLRPPAP 99 +PPP P + P P L G GG G+ + A+P QA G++P P Sbjct: 188 LPPPPPPQPPPPPPQSLGPPGRPNPGGNGVVEVYSAAAPLAGSGTVEIQALGMQPYPP 245
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 20/80 (25%) Frame = -1 Query: 281 MADVPPPTPVRSCDPWPWGL----SVAGAEARGGWGITTA-------RAGASP------- 156 ++D PPP+P R P P S + GG G+ + RA +P Sbjct: 365 ISDSPPPSPRRPAGPGPLSFVSSSSAQVSSGPGGGGLPQSSGRAARPRAAVAPRVRSPPR 424 Query: 155 --AWPLIQSRAQASGLRPPA 102 A P++ + A A+G PPA Sbjct: 425 AAAAPVVSASADAAGPAPPA 444
>PK1L1_HUMAN (Q8TDX9) Polycystic kidney disease 1-like 1 protein (Polycystin-1L1)| Length = 2849 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +1 Query: 160 EAPALAVVIPQPPLASAPATESPHGQGS 243 EAP A V P PL TE+PHG S Sbjct: 2019 EAPGSARVEPHSPLRGGAQTEAPHGPNS 2046
>KCNH3_HUMAN (Q9ULD8) Potassium voltage-gated channel subfamily H member 3| (Voltage-gated potassium channel subunit Kv12.2) (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Brain-specific eag-like channel 1) (BEC1) Length = 1083 Score = 23.9 bits (50), Expect(2) = 2.3 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 177 SQSRRFPRLAADSVTRSSLRPPAAGPAVSMLAVQPNMLAEP 55 SQS +PR A + S PPA+G L +P+ A P Sbjct: 982 SQSSPWPRATAFWTSTSDSEPPASGD----LCSEPSTPASP 1018 Score = 23.9 bits (50), Expect(2) = 2.3 Identities = 8/15 (53%), Positives = 8/15 (53%) Frame = -1 Query: 269 PPPTPVRSCDPWPWG 225 P P P PWPWG Sbjct: 964 PRPGPPPLMAPWPWG 978
>EGON_DROME (P15370) Protein embryonic gonad (Protein eagle) (Protein spready)| Length = 373 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 Query: 193 PPLASAPATESPHGQGSQDLTGVGGGTS 276 P + SA AT SP +G+ TG+GGG S Sbjct: 142 PCIKSATATTSPRIEGAAVGTGIGGGAS 169
>LRC25_MOUSE (Q8K1T1) Leucine-rich repeat-containing protein 25 precursor| (Monocyte and plasmacytoid-activated protein) Length = 297 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 Query: 248 SCDPWPWGLSVAGAEARGGWGITTARAGASPAWPLIQSRAQAS 120 SC P WG GA G + A +G+ AW L++ R +AS Sbjct: 160 SCPP-SWGPGTIGALVAGTISLAVAVSGSVLAWRLLRRRRRAS 201
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 Query: 268 PHPLR*GPATPGRGGSRSRAPKQ 200 PHP + P PG GGS +R P+Q Sbjct: 178 PHPQQQPPQQPGPGGSPNRPPQQ 200
>ADCY6_HUMAN (O43306) Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase| type VI) (ATP pyrophosphate-lyase 6) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1168 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +3 Query: 213 RDREPPRPGVAGPHRSGWGD 272 RD EPP P AGP R W D Sbjct: 48 RDAEPPSPTPAGPPRCPWQD 67
>LASP1_BOVIN (Q3B7M5) LIM and SH3 domain protein 1 (LASP-1)| Length = 260 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +2 Query: 8 TKHFVKPQQSDGARRRGSASMFGCTASIETAGPAAGGRRLERVTESAA 151 T + +PQQ A+ G ASI+ + P GG+R V + +A Sbjct: 167 TPVYQQPQQQPAAQSYGGYKEPAAPASIQRSAPGGGGKRYRAVYDYSA 214
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 28.9 bits (63), Expect = 3.1 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 8/48 (16%) Frame = +1 Query: 151 QAGEAPALAVVIPQPPLASAPATESP-----HGQGSQDLT---GVGGG 270 QA P + V PQPPL++ P+T P QG T G+G G Sbjct: 289 QATAPPEVGRVSPQPPLSTKPSTAEPRPPAGEAQGKSATTVPSGLGAG 336
>PURQ_HALSA (Q9HNU2) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)| (FGAM synthase I) Length = 224 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +1 Query: 142 ISGQAGEAPALAVVIPQPPLASAPATESPHGQG 240 ++G G+ +AV++P P A+ PA + GQG Sbjct: 186 VAGVTGDRDHVAVMMPHPERATLPALGATDGQG 218
>PLSX_AZOSE (Q5P0D7) Fatty acid/phospholipid synthesis protein plsX| Length = 337 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 10/60 (16%) Frame = +2 Query: 11 KHFVKPQQSDGA----------RRRGSASMFGCTASIETAGPAAGGRRLERVTESAAKRG 160 KH V ++ +GA + GSA F +I A AA R +ER+TE G Sbjct: 275 KHRVDHRRYNGAALLGLRGVVVKSHGSADAFAFEQAIHRAAEAASNRLIERITERMTAMG 334
>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)| (Obscurin-MLCK) (Obscurin-RhoGEF) Length = 7968 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +1 Query: 154 AGEAPALAVVIPQPPLASAPATESPHGQGSQDLTGVGG 267 + EA A +P P AP + H QGS+ L GG Sbjct: 6975 SSEACGEAQRLPSAPSGGAPIRDMGHPQGSKQLPSTGG 7012
>CHST3_HUMAN (Q7LGC8) Carbohydrate sulfotransferase 3 (EC 2.8.2.17) (Chondroitin| 6-sulfotransferase) (Chondroitin 6-O-sulfotransferase 1) (C6ST-1) (C6ST) (Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 0) (GST-0) Length = 479 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +3 Query: 213 RDREPPRPGVAGPHR 257 ++ EPPRP VAGP R Sbjct: 119 KEEEPPRPAVAGPRR 133
>SYA_CHLTE (Q8KG04) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 885 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 266 GGHQPFPATMATERREEVAGGELQQQAVSLKSKL 367 GG + + TER + V+G EL+Q AV+L+ ++ Sbjct: 771 GGEEVNGCRIMTERLDGVSGDELRQAAVALRERV 804
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 151 QAGEAPALAVVIPQPPLASAPATESP 228 QA P + V PQPPL++ P+T P Sbjct: 288 QATAPPEVGRVSPQPPLSTKPSTAEP 313
>SCAP_HUMAN (Q12770) Sterol regulatory element-binding protein| cleavage-activating protein (SREBP cleavage-activating protein) (SCAP) Length = 1278 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -3 Query: 141 SVTRSSLRPPAAGPAVSMLAVQPNMLAEPRRRAPSLCW 28 +V +LRPP+ GP +S P + +PSL W Sbjct: 926 AVCTPALRPPSPGPVLSQAPEDEG--GSPEKGSPSLAW 961
>IF2_BDEBA (Q6MMS6) Translation initiation factor IF-2| Length = 975 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/38 (28%), Positives = 21/38 (55%) Frame = +1 Query: 166 PALAVVIPQPPLASAPATESPHGQGSQDLTGVGGGTSA 279 P +A +P P+A+AP +P + + + G G +S+ Sbjct: 181 PVVAKEVPAAPVAAAPEAPAPQARKKEVVVGTSGVSSS 218
>H82_NEIG1 (P11910) Outer membrane protein H.8 precursor| Length = 88 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 154 AGEAPALAVVIPQPPLASAPATESPHGQGS 243 A EAPA + P A APA E+P + + Sbjct: 43 AAEAPAAEAAAAEAPAAEAPAAEAPAAEAA 72
>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) (Low-voltage-activated calcium channel alpha1 3.2 subunit) Length = 2353 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 281 MADVPPPTPVRSCDPWPWGLSVAGAEARGGW 189 + D PP +RS PWG S A + R W Sbjct: 1115 LGDQKPPASLRSSPCAPWGPSGAWSSRRSSW 1145
>RS2_STRAW (Q82JX7) 30S ribosomal protein S2| Length = 308 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 154 AGEAPALAVVIPQPPLASAPATESPHGQGSQ 246 A EAPA + P A APA E+P Q Sbjct: 277 AAEAPAAEAPAAEAPAAEAPAAEAPAADAEQ 307
>CT062_HUMAN (Q4KN68) Protein C20orf62| Length = 170 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Frame = +3 Query: 219 REPPRPGVAGPH-RSGWGDISHFLRLWRQND 308 +E P PGV PH + GW + R W D Sbjct: 14 QESPHPGVYSPHPQGGWQPTADSYREWHNED 44
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = -1 Query: 290 SQEMADVPPPT--PVRSCDPWPWGLSVAGAEARGGWGITTARAGASPA 153 ++ A PPP PV S + WG A A GW A G S A Sbjct: 41 TETSAPAPPPASAPVSSSNNDGWGEPAPSAPADNGWADAGASNGGSGA 88
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 25.0 bits (53), Expect(2) = 8.5 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -2 Query: 295 HSRRKWLMSPHPLR*GPATPGRGGSRSRAPKQ 200 HSR W +SP R + R SRSR+ Q Sbjct: 472 HSRSSWSLSPSRSRSVTRSGSRSQSRSRSRSQ 503 Score = 20.8 bits (42), Expect(2) = 8.5 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -3 Query: 177 SQSRRFPRLAADSVTRSSLRPPAAGPAV 94 SQS + + S R L PAA PAV Sbjct: 502 SQSHSQSQSHSPSPPREKLTRPAASPAV 529
>SYA_METCA (Q60BS6) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 867 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/36 (44%), Positives = 21/36 (58%) Frame = +2 Query: 44 ARRRGSASMFGCTASIETAGPAAGGRRLERVTESAA 151 ARR G +F + +G AAG RR+E VT +AA Sbjct: 661 ARRAGDIGLFKI---VSESGVAAGVRRIEAVTGAAA 693
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = +3 Query: 216 DREPPRPGVAGPHRSGWGDISHFLRLWR---QNDEKRLPA 326 + PPRP ++ P R WG+++ L +R Q+ E+ L A Sbjct: 883 EESPPRPSLSQPPRRPWGNLTAELSRFRGTVQDLERHLRA 922
>HEP_DROME (Q23977) Dual specificity mitogen-activated protein kinase kinase| hemipterous (EC 2.7.12.2) (MAPKK) Length = 1178 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 193 PPLASAPATESPHGQGSQDLTGVGGGTSAISCDYG 297 P L A AT S G G+ L G G G++ + YG Sbjct: 484 PTLQRATATGSAIGSGAGSLAGSGSGSAGGAVKYG 518
>CHS5_USTMA (O13394) Chitin synthase 5 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 5) (Class-IV chitin synthase 5) Length = 1239 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/45 (33%), Positives = 20/45 (44%) Frame = +1 Query: 148 GQAGEAPALAVVIPQPPLASAPATESPHGQGSQDLTGVGGGTSAI 282 G+ G P+ +PQ A PHG G + G GGG S + Sbjct: 90 GRVGYMPSTTGHLPQHGAA-------PHGSGMAGIVGPGGGLSGL 127
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +1 Query: 154 AGEAPALAVVIPQPPLASAPATESPHGQGSQDLTGVGGGTSAI 282 A AP VV+P PP SA ++ + G G+G +A+ Sbjct: 25 AALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAAAAAL 67
>EPN2_RAT (Q9Z1Z3) Epsin-2 (EPS-15-interacting protein 2)| Length = 583 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1 Query: 281 MADVPPPTPV-RSCDPWPWGLSVAGAEARGGWGITTARAGASPAWPLIQSRAQAS 120 M +P PV + +PW G A WG T A A S WP ++ AS Sbjct: 287 MDALPSSGPVAQKTEPWSTGTP---ANQTNPWGGTVAPANISDPWPSFGTKPAAS 338
>Y1977_PSEAE (P29370) Hypothetical protein PA1977| Length = 287 Score = 27.3 bits (59), Expect = 9.0 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = -2 Query: 373 LAQLRFKGDSLLLQLAAGNL------FSSFCRHSRRKWLMSPHPLR*GPATPGRGGSRSR 212 LA L F G+SLL + A + F++ S L LR PATP RGG R Sbjct: 12 LAMLAFAGNSLLCRAALKDTAIDAVSFTALRLFSGALMLAVLLHLRRRPATPARGGWRGA 71 Query: 211 A 209 A Sbjct: 72 A 72
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 4/68 (5%) Frame = -1 Query: 290 SQEMADVPPPTPVRSCDPWPWGLSVAGAEARGGWGIT----TARAGASPAWPLIQSRAQA 123 S A PPP+ +S G + G +A G G+ A ASPAW Q R+ Sbjct: 441 SSPSAPPPPPSQPQS-QAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHP 499 Query: 122 SGLRPPAP 99 + + P P Sbjct: 500 A-MSPGTP 506
>XPA_HUMAN (P23025) DNA-repair protein complementing XP-A cells (Xeroderma| pigmentosum group A complementing protein) Length = 273 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Frame = +3 Query: 219 REPPRPGVA--GPHRSGWGDISHFLRL 293 REPP + PH S WGD+ +L+L Sbjct: 158 REPPLKFIVKKNPHHSQWGDMKLYLKL 184
>AQP12_HUMAN (Q8IXF9) Aquaporin-12A (AQP-12)| Length = 295 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 198 PCFGARDREPPRPGVAGPHRS 260 P G+ REP R GV GPH S Sbjct: 275 PAKGSSVREPGRSGVEGPHSS 295
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Frame = -1 Query: 266 PPTPVRSCDPWPWGLSVAGAEARGGWGITTARAGA-----SPAWPLIQSRAQASGLR 111 P P + DPWP A + WG+ T S W Q A ++G R Sbjct: 370 PAAPASTSDPWP-SFGTKPAASIDPWGVPTGATAQSVPKNSDPWAASQQPASSAGKR 425 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,955,407 Number of Sequences: 219361 Number of extensions: 896583 Number of successful extensions: 4320 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3977 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4308 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
