ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001032999.2| Homo sapiens core-binding factor, runt domai... 44 0.34
2ref|XM_862325.1| PREDICTED: Canis familiaris similar to Rho-GTPa... 44 0.34
3ref|XM_549365.2| PREDICTED: Canis familiaris similar to Rho-GTPa... 44 0.34
4emb|AL162505.20| Human DNA sequence from clone RP11-327D19 on ch... 44 0.34
5gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.34
6gb|AF052211.1|AF052211 Homo sapiens brain MTG8 related protein (... 44 0.34
7gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
8emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
9tpg|BK005051.1| TPA: TPA_inf: Oryza sativa (indica cultivar-grou... 42 1.3
10tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, compl... 42 1.3
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
14gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-201... 42 1.3
15dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
16emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.3
17emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
18gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 5.3
19ref|XM_472432.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
20gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.3
21ref|NM_153089.2| Mus musculus protein phosphatase 1, regulatory ... 40 5.3
22ref|XM_476927.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
23gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.3
24ref|XM_582226.2| PREDICTED: Bos taurus similar to folate hydrola... 40 5.3
25ref|XM_587484.2| PREDICTED: Bos taurus similar to RGD, leucine-r... 40 5.3
26ref|NM_001008222.1| Homo sapiens zinc finger, DHHC-type containi... 40 5.3
27gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.3
28gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
29gb|BC057542.1| Mus musculus protein phosphatase 1, regulatory (i... 40 5.3
30gb|BC054764.1| Mus musculus protein phosphatase 1, regulatory (i... 40 5.3
31emb|AL591386.19| Human DNA sequence from clone RP11-349K21 on ch... 40 5.3
32gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 5.3
33emb|AL139161.8| Human DNA sequence from clone RP5-940F7 on chrom... 40 5.3
34emb|AL034405.16|HS537K23 Human DNA sequence from clone RP4-537K2... 40 5.3
35emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.3
36emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
37emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
38gb|BC000035.2| Homo sapiens zinc finger, DHHC-type containing 9,... 40 5.3
39dbj|AK042123.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 5.3
40dbj|AK037627.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 5.3
41dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
43gb|AF423761.1| Mus musculus protein phosphatase 1 regulatory sub... 40 5.3
44dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
45dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
46dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
47gb|AY040244.3| Burkholderia pseudomallei ATP-dependent DNA helic... 40 5.3
48dbj|AK121536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
49dbj|AK121517.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
50dbj|AK068985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
51dbj|AK067261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
52dbj|AK063428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
53dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
54emb|AJ535052.1|OSA535052 Oryza sativa (japonica cultivar-group) ... 40 5.3
55gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
56gb|AC000387.1|AC000387 Genomic sequence from Human 9q34, complet... 40 5.3
57dbj|AB209807.1| Homo sapiens mRNA for zinc finger, DHHC domain c... 40 5.3
58emb|AL663077.8| Mouse DNA sequence from clone RP23-22K4 on chrom... 40 5.3 
>ref|NM_001032999.2| Homo sapiens core-binding factor, runt domain, alpha subunit 2;
           translocated to, 2 (CBFA2T2), transcript variant 3, mRNA
          Length = 7319

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 40  cggcgcgcggcggcggggctcggcga 65
           |||||||||||||||| |||||||||
Sbjct: 122 cggcgcgcggcggcggcgctcggcga 147
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>ref|XM_862325.1| PREDICTED: Canis familiaris similar to Rho-GTPase-activating protein
            4 (Rho-GAP hematopoietic protein C1) (p115), transcript
            variant 2 (LOC492245), mRNA
          Length = 3090

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 106  ggcggccggaggccggaggctt 127
            ||||||||||||||||||||||
Sbjct: 2746 ggcggccggaggccggaggctt 2725
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>ref|XM_549365.2| PREDICTED: Canis familiaris similar to Rho-GTPase-activating protein
            4 (Rho-GAP hematopoietic protein C1) (p115), transcript
            variant 1 (LOC492245), mRNA
          Length = 3066

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 106  ggcggccggaggccggaggctt 127
            ||||||||||||||||||||||
Sbjct: 2722 ggcggccggaggccggaggctt 2701
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>emb|AL162505.20| Human DNA sequence from clone RP11-327D19 on chromosome 20 Contains the
             5' end of two variants of the CBFA2T2 gene for runt domain
             core-binding factor alpha subunit 2 and a CpG island,
             complete sequence
          Length = 77498

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 40    cggcgcgcggcggcggggctcggcga 65
             |||||||||||||||| |||||||||
Sbjct: 36785 cggcgcgcggcggcggcgctcggcga 36810
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 41     ggcgcgcggcggcggggctcgg 62
              ||||||||||||||||||||||
Sbjct: 910861 ggcgcgcggcggcggggctcgg 910840
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>gb|AF052211.1|AF052211 Homo sapiens brain MTG8 related protein (MTGR1) mRNA, partial cds
          Length = 169

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 40  cggcgcgcggcggcggggctcggcga 65
           |||||||||||||||| |||||||||
Sbjct: 111 cggcgcgcggcggcggcgctcggcga 136
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>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0018K15, complete sequence
          Length = 168519

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 31    gcagagcgacggcgcgcggcggcgg 55
             |||||||||||||| ||||||||||
Sbjct: 71853 gcagagcgacggcgagcggcggcgg 71829
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>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete
              sequence
          Length = 139971

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     gagcgacggcgcgcggcggcg 54
              |||||||||||||||||||||
Sbjct: 103561 gagcgacggcgcgcggcggcg 103541
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>tpg|BK005051.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY
           transcription factor 48 (WRKY48) gene, complete cds
          Length = 1077

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 31  gcagagcgacggcgcgcggcggcgg 55
           |||||||||||||| ||||||||||
Sbjct: 386 gcagagcgacggcgagcggcggcgg 410
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>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds, alternatively
             spliced
          Length = 227735

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    aaactgcggggccggcggccg 113
             |||||||||||||||||||||
Sbjct: 69612 aaactgcggggccggcggccg 69592
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     gagcgacggcgcgcggcggcg 54
              |||||||||||||||||||||
Sbjct: 103561 gagcgacggcgcgcggcggcg 103541



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 314      gaggttgccggcggcgagct 333
                ||||||||||||||||||||
Sbjct: 20603130 gaggttgccggcggcgagct 20603149
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 34       gagcgacggcgcgcggcggcg 54
                |||||||||||||||||||||
Sbjct: 13961626 gagcgacggcgcgcggcggcg 13961606



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 40       cggcgcgcggcggcggggct 59
                ||||||||||||||||||||
Sbjct: 26565888 cggcgcgcggcggcggggct 26565869



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 104     ccggcggccggaggccggag 123
               ||||||||||||||||||||
Sbjct: 5032060 ccggcggccggaggccggag 5032041
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 31       gcagagcgacggcgcgcggcggcgg 55
                |||||||||||||| ||||||||||
Sbjct: 23386317 gcagagcgacggcgagcggcggcgg 23386293
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>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence
          Length = 133488

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 93     aaactgcggggccggcggccg 113
              |||||||||||||||||||||
Sbjct: 119667 aaactgcggggccggcggccg 119647
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>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031J07
          Length = 172511

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    gagcgacggcgcgcggcggcg 54
             |||||||||||||||||||||
Sbjct: 78846 gagcgacggcgcgcggcggcg 78826
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>emb|AL442103.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0102C09, complete
             sequence
          Length = 72636

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    gagcgacggcgcgcggcggcg 54
             |||||||||||||||||||||
Sbjct: 50440 gagcgacggcgcgcggcggcg 50420
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>emb|AL606442.3|OSJN00014 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0068L06,
             complete sequence
          Length = 145517

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    gagcgacggcgcgcggcggcg 54
             |||||||||||||||||||||
Sbjct: 34810 gagcgacggcgcgcggcggcg 34790
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 31     gcagagcgacggcgcgcggcggcg 54
              |||||||| |||||||||||||||
Sbjct: 599006 gcagagcgccggcgcgcggcggcg 599029
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>ref|XM_472432.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1368

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 gaggttgccggcggcgagct 333
           ||||||||||||||||||||
Sbjct: 726 gaggttgccggcggcgagct 707
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>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940117D9, complete sequence
          Length = 143368

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     cgcgcggcggcggggctcgg 62
              ||||||||||||||||||||
Sbjct: 120206 cgcgcggcggcggggctcgg 120225
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>ref|NM_153089.2| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit
            16B (Ppp1r16b), mRNA
          Length = 3228

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gggtggggggacatcagcca 280
            ||||||||||||||||||||
Sbjct: 1916 gggtggggggacatcagcca 1897
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>ref|XM_476927.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1680

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 41 ggcgcgcggcggcggggctc 60
          ||||||||||||||||||||
Sbjct: 8  ggcgcgcggcggcggggctc 27
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 34      gagcgacggcgcgcggcggcgggg 57
               ||||| ||||||||||||||||||
Sbjct: 2500446 gagcggcggcgcgcggcggcgggg 2500469
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>ref|XM_582226.2| PREDICTED: Bos taurus similar to folate hydrolase 1 isoform 1
           (LOC505865), mRNA
          Length = 3859

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 39  acggcgcgcggcggcggggc 58
           ||||||||||||||||||||
Sbjct: 353 acggcgcgcggcggcggggc 334
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>ref|XM_587484.2| PREDICTED: Bos taurus similar to RGD, leucine-rich repeat,
            tropomodulin and proline-rich containing protein
            (LOC510354), mRNA
          Length = 3985

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   ggcggcggggctcggcgagc 67
            ||||||||||||||||||||
Sbjct: 2630 ggcggcggggctcggcgagc 2611
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>ref|NM_001008222.1| Homo sapiens zinc finger, DHHC-type containing 9 (ZDHHC9),
           transcript variant 2, mRNA
          Length = 2913

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 ggggccggcggccggaggccggag 123
           |||||||| |||||||||||||||
Sbjct: 112 ggggccggaggccggaggccggag 89
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 34      gagcgacggcgcgcggcggcgggg 57
               ||||| ||||||||||||||||||
Sbjct: 3684246 gagcggcggcgcgcggcggcgggg 3684223
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>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0029K08, complete sequence
          Length = 136687

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   gaggttgccggcggcgagct 333
             ||||||||||||||||||||
Sbjct: 85696 gaggttgccggcggcgagct 85715
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>gb|BC057542.1| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit
            16B, mRNA (cDNA clone MGC:66497 IMAGE:6414610), complete
            cds
          Length = 2944

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gggtggggggacatcagcca 280
            ||||||||||||||||||||
Sbjct: 1620 gggtggggggacatcagcca 1601
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>gb|BC054764.1| Mus musculus protein phosphatase 1, regulatory (inhibitor) subunit
            16B, mRNA (cDNA clone MGC:64754 IMAGE:6414610), complete
            cds
          Length = 2944

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gggtggggggacatcagcca 280
            ||||||||||||||||||||
Sbjct: 1620 gggtggggggacatcagcca 1601
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>emb|AL591386.19| Human DNA sequence from clone RP11-349K21 on chromosome 9, complete
            sequence
          Length = 69657

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 41   ggcgcgcggcggcggggctcggcg 64
            ||||||||| ||||||||||||||
Sbjct: 8404 ggcgcgcgggggcggggctcggcg 8427
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 46      gcggcggcggggctcggcga 65
               ||||||||||||||||||||
Sbjct: 2088608 gcggcggcggggctcggcga 2088589
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>emb|AL139161.8| Human DNA sequence from clone RP5-940F7 on chromosome 1q42.2-43
             Contains the 3' end of the NID gene for nidogen (enactin)
             protein, complete sequence
          Length = 103608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   acttgggttgattttccaat 396
             ||||||||||||||||||||
Sbjct: 67404 acttgggttgattttccaat 67385
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>emb|AL034405.16|HS537K23 Human DNA sequence from clone RP4-537K23 on chromosome Xq25-26.1
             Contains the 3' end of the ZDHHC9 gene for zinc finger,
             DHHC domain containing 9 (CGI-89, ZNF379), a novel gene, a
             sal-like family pseudogene, the SDCCAG16 gene for
             serologically defined colon cancer antigen 16 (NY-CO-16),
             the 5' UTR of a novel gene (FLHJ11362) and seven CpG
             islands, complete sequence
          Length = 156589

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   ggggccggcggccggaggccggag 123
             |||||||| |||||||||||||||
Sbjct: 13372 ggggccggaggccggaggccggag 13395
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 34      gagcgacggcgcgcggcggcgggg 57
               ||||| ||||||||||||||||||
Sbjct: 3425388 gagcggcggcgcgcggcggcgggg 3425365
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>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   gaggttgccggcggcgagct 333
             ||||||||||||||||||||
Sbjct: 37464 gaggttgccggcggcgagct 37483
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>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete
              sequence
          Length = 116952

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    gaggttgccggcggcgagct 333
              ||||||||||||||||||||
Sbjct: 113758 gaggttgccggcggcgagct 113777
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>gb|BC000035.2| Homo sapiens zinc finger, DHHC-type containing 9, transcript
           variant 2, mRNA (cDNA clone MGC:845 IMAGE:3506601),
           complete cds
          Length = 2477

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 ggggccggcggccggaggccggag 123
           |||||||| |||||||||||||||
Sbjct: 79  ggggccggaggccggaggccggag 56
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>dbj|AK042123.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630060G10 product:protein phosphatase 1
            regulatory subunit 16B (Ppp1r16b) mRNA, full insert
            sequence
          Length = 4751

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gggtggggggacatcagcca 280
            ||||||||||||||||||||
Sbjct: 1597 gggtggggggacatcagcca 1578
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>dbj|AK037627.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130030G22 product:PROTEIN PHOSPHATASE 1
            REGULATORY SUBUNIT 16B homolog [Mus musculus], full
            insert sequence
          Length = 3228

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gggtggggggacatcagcca 280
            ||||||||||||||||||||
Sbjct: 1916 gggtggggggacatcagcca 1897
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 314      gaggttgccggcggcgagct 333
                ||||||||||||||||||||
Sbjct: 21427946 gaggttgccggcggcgagct 21427965
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      ggcgcgcggcggcggggctc 60
               ||||||||||||||||||||
Sbjct: 4685084 ggcgcgcggcggcggggctc 4685103
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>gb|AF423761.1| Mus musculus protein phosphatase 1 regulatory subunit 16B (Ppp1r16b)
            mRNA, complete cds
          Length = 2235

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  gggtggggggacatcagcca 280
            ||||||||||||||||||||
Sbjct: 1618 gggtggggggacatcagcca 1599
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>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0460H04
          Length = 166490

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cggcgcgcggcggcggggct 59
             ||||||||||||||||||||
Sbjct: 99541 cggcgcgcggcggcggggct 99522
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>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1172G12
          Length = 171974

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   ccggcggccggaggccggag 123
             ||||||||||||||||||||
Sbjct: 74174 ccggcggccggaggccggag 74155
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0084L07
          Length = 127992

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   ggcgcgcggcggcggggctc 60
            ||||||||||||||||||||
Sbjct: 2994 ggcgcgcggcggcggggctc 3013
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>gb|AY040244.3| Burkholderia pseudomallei ATP-dependent DNA helicase protein RecG
            (recG) gene, partial cds; and oxidative stress regulatory
            protein OxyR (oxyR), catalase-peroxidase protein KatG
            (katG), and DpsA (dpsA) genes, complete cds
          Length = 4910

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 34   gagcgacggcgcgcggcggcgggg 57
            ||||| ||||||||||||||||||
Sbjct: 3970 gagcggcggcgcgcggcggcgggg 3993
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>dbj|AK121536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031D23, full
           insert sequence
          Length = 2052

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 ccggcggcgagctgcaacagcagg 344
           |||||||||||||| |||||||||
Sbjct: 363 ccggcggcgagctgaaacagcagg 340
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>dbj|AK121517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027B16, full
           insert sequence
          Length = 5193

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 gaggttgccggcggcgagct 333
           ||||||||||||||||||||
Sbjct: 424 gaggttgccggcggcgagct 405
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>dbj|AK068985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002B16, full
           insert sequence
          Length = 2055

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  cggcgcgcggcggcggggct 59
           ||||||||||||||||||||
Sbjct: 352 cggcgcgcggcggcggggct 371
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>dbj|AK067261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G06, full
           insert sequence
          Length = 2720

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 40  cggcgcgcggcggcggggct 59
           ||||||||||||||||||||
Sbjct: 302 cggcgcgcggcggcggggct 321
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>dbj|AK063428.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D04, full
           insert sequence
          Length = 1734

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 gaggttgccggcggcgagct 333
           ||||||||||||||||||||
Sbjct: 886 gaggttgccggcggcgagct 867
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>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506C07
          Length = 123451

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ggcgcgcggcggcggggctc 60
             ||||||||||||||||||||
Sbjct: 92457 ggcgcgcggcggcggggctc 92476
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>emb|AJ535052.1|OSA535052 Oryza sativa (japonica cultivar-group) pdr3 gene for PDR-like ABC
           transporter, exons 1-19
          Length = 9133

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 gaggttgccggcggcgagct 333
           ||||||||||||||||||||
Sbjct: 315 gaggttgccggcggcgagct 296
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 314      gaggttgccggcggcgagct 333
                ||||||||||||||||||||
Sbjct: 21738145 gaggttgccggcggcgagct 21738164
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>gb|AC000387.1|AC000387 Genomic sequence from Human 9q34, complete sequence
          Length = 39261

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 41   ggcgcgcggcggcggggctcggcg 64
            ||||||||| ||||||||||||||
Sbjct: 4394 ggcgcgcgggggcggggctcggcg 4417
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>dbj|AB209807.1| Homo sapiens mRNA for zinc finger, DHHC domain containing 9 variant
           protein
          Length = 2504

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 ggggccggcggccggaggccggag 123
           |||||||| |||||||||||||||
Sbjct: 124 ggggccggaggccggaggccggag 101
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>emb|AL663077.8| Mouse DNA sequence from clone RP23-22K4 on chromosome 2, complete
             sequence
          Length = 96128

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gggtggggggacatcagcca 280
             ||||||||||||||||||||
Sbjct: 80825 gggtggggggacatcagcca 80806


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,849,345
Number of Sequences: 3902068
Number of extensions: 2849345
Number of successful extensions: 70179
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68360
Number of HSP's gapped (non-prelim): 1819
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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