ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39h10 |
|---|---|
| Clone Library Name | barley_pub |
>MAPT_ARATH (Q9T041) Microtubule-associated protein TORTIFOLIA1| (Microtubule-associated protein SPIRAL2) (Protein CONVOLUTA) Length = 864 Score = 44.7 bits (104), Expect = 9e-05 Identities = 18/49 (36%), Positives = 36/49 (73%) Frame = +2 Query: 269 SSTAAPSKGKAAFELKHKLVQALNKIADRDTHQIGLSELQTTVDALAPD 415 S++ + + +A ELK K++ +++K+ADRDT+QI + +L+ T+ +L P+ Sbjct: 28 SNSGSLTSFQAMVELKQKILTSISKLADRDTYQIAVEDLEKTIQSLTPE 76
>SWC4_NEUCR (Q870Q1) SWR1-complex protein 4| Length = 771 Score = 34.7 bits (78), Expect = 0.089 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -3 Query: 122 AAAVARSPSVRPSVRPARSLSAGESCLPGDKHKPPIR 12 AAAVA +P V P+ SL+A + D H+PP+R Sbjct: 359 AAAVAAAPEVPPAASRRESLAASSTAGANDHHEPPVR 395
>MPC1_RALEU (P17295) Metapyrocatechase 1 (EC 1.13.11.2) (CatO2ase) (Catechol| 2,3-dioxygenase I) Length = 313 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -3 Query: 107 RSPSVRPSVRPARSLSAGESCLPGDKHKPPIRPE 6 R+PS + R AR+++A +S + GD H P+ PE Sbjct: 201 RNPSPESAARQARTVAAAKSFVAGDSHLHPLNPE 234
>LIPB_DEIRA (Q9RWA5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier| protein]-protein-N-lipoyltransferase) (Lipoate-protein ligase B) Length = 336 Score = 31.6 bits (70), Expect = 0.76 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Frame = -3 Query: 245 CGDELAGVGLSGWCRRGRMPSSSHGGEGWRW*VRHHPWL-DPAAAVARS-PSVRPSVRPA 72 C A LS +C GR G+GWRW P L P V +S P RP +P Sbjct: 24 CASRTAARKLSLYCSEGRTRCGMGQGKGWRWPGHRPPGLPSPTNRVGQSVPKWRP--QPH 81 Query: 71 RSLSAGES 48 ++ G + Sbjct: 82 KAAGGGRT 89
>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) (Verprolin homology domain-containing protein 2) Length = 498 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = +2 Query: 110 PPPPLDQAMGGAGPTTSSPHPHG 178 PPPPL Q GGA P P P G Sbjct: 379 PPPPLSQPTGGAPPPPPPPPPPG 401
>CRF_HUMAN (P06850) Corticoliberin precursor (Corticotropin-releasing factor)| (CRF) (Corticotropin-releasing hormone) Length = 196 Score = 30.8 bits (68), Expect = 1.3 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +1 Query: 13 RIGGLCLSPGRQLSPAESERAGRTDGRTDGERATA 117 R+G L SP LSPA S AG + R E+ATA Sbjct: 75 RLGNLNKSPAAPLSPASSLLAGGSGSRPSPEQATA 109
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 30.8 bits (68), Expect = 1.3 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = +2 Query: 110 PPPPLDQAMGGAGPTTSSPHPHG 178 PPPPL Q GGA P P P G Sbjct: 376 PPPPLSQPSGGAPPPPPPPPPPG 398
>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 25.4 bits (54), Expect(2) = 1.4 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +3 Query: 153 PPPALTPMGR*RHPPPSAPATETDP 227 PPP+ P PPPS P+ P Sbjct: 312 PPPSRAPTAAPPPPPPSRPSVAVPP 336 Score = 23.9 bits (50), Expect(2) = 1.4 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +2 Query: 95 RTESAPPPPLDQAMGGAGPTTSSPHPHG 178 R ++ PPPP + GG P PH G Sbjct: 273 RRQAPPPPP--PSRGGPPPPPPPPHNSG 298
>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 30.4 bits (67), Expect = 1.7 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -3 Query: 215 SGWCRRGRMPSSSHGGEGWRW*VRHHPWLDPAAAVARSPSVRPSVRP 75 +G C + H G RW R PWLDPAAA A + + P Sbjct: 16 AGQCGPVGVRKEMHCGVASRW-RRRRPWLDPAAAAAAAAAAGEQQTP 61
>KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A member 5| (Voltage-gated potassium channel subunit Kv1.5) (HK2) (HPCN1) Length = 613 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Frame = +1 Query: 82 TDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRPL------LHQPLRPTP 228 T G +DG + A G ++P PP D G+RPL L +P RP P Sbjct: 39 TAGLSDGPKEPAPKGRGAQRDADSGVRPLPPLPDPGVRPLPPLPEELPRPRRPPP 93
>ITIH2_PIG (O02668) Inter-alpha-trypsin inhibitor heavy chain H2 precursor| (ITI heavy chain H2) (Inter-alpha-inhibitor heavy chain 2) Length = 935 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDPRQLV 239 W+ P P +P PA+ P PPP E DP ++ Sbjct: 658 WVNPLPTPRVPLPAVGPSVIEATPPPHVMRVENDPHFII 696
>WNK1_MOUSE (P83741) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2377 Score = 30.4 bits (67), Expect = 1.7 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +1 Query: 40 GRQLSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRP-----LL 204 GR+ P +S+ + + + G ++ +G+ G T L P G P L Sbjct: 2117 GRRRRPTKSKGSKSSRSSSLGNKSPQLSGNLSGQSGTSVLHPQQTLHPAGNTPETGHNQL 2176 Query: 205 HQPLRPTPASSSPHRFFRRD 264 QPL+P+P+S + + F D Sbjct: 2177 LQPLKPSPSSDNLYSAFTSD 2196
>XYLB_STRCO (Q9RK00) Xylulose kinase (EC 2.7.1.17) (Xylulokinase)| Length = 481 Score = 30.4 bits (67), Expect = 1.7 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = -3 Query: 266 SSRRKKRCGDELAGVGLSGWCRR-GRMPSSSHGGEGWRW*VRHHPWLDPAAAVARSP 99 S+ + +R DEL G W R G +PS+S W W H P A R P Sbjct: 105 SAPQARRLIDELGGA--KAWAERTGSVPSASFTVTKWAWLTEHEPEAARAVKAVRLP 159
>WNK1_RAT (Q9JIH7) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) Length = 2126 Score = 30.4 bits (67), Expect = 1.7 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = +1 Query: 40 GRQLSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRP-----LL 204 GR+ P +S+ + + + G ++ +G+ G T L P G P L Sbjct: 1866 GRRRRPTKSKGSKSSRSSSLGNKSPQLSGNLSGQSGTSVLNPQQTLHPPGNTPETGHNQL 1925 Query: 205 HQPLRPTPASSSPHRFFRRD 264 QPL+P+P+S + + F D Sbjct: 1926 LQPLKPSPSSDNLYSAFTSD 1945
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 24.6 bits (52), Expect(2) = 1.8 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = +3 Query: 153 PPPALTPMGR*RHPPPSAPATETDP 227 PPP+ P PPPS P P Sbjct: 312 PPPSRAPTAAPPPPPPSRPGVGAPP 336 Score = 24.3 bits (51), Expect(2) = 1.8 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +2 Query: 95 RTESAPPPPLDQAMGGAGPTTSSPHPHG 178 R ++ PPPP + GG P PH G Sbjct: 273 RRQAPPPPP--PSRGGPPPPPPPPHSSG 298
>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 24.6 bits (52), Expect(2) = 1.8 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = +3 Query: 153 PPPALTPMGR*RHPPPSAPATETDP 227 PPP+ P PPPS P P Sbjct: 309 PPPSRAPTAAPPPPPPSRPGVVVPP 333 Score = 24.3 bits (51), Expect(2) = 1.8 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +2 Query: 95 RTESAPPPPLDQAMGGAGPTTSSPHPHG 178 R ++ PPPP + GG P PH G Sbjct: 270 RRQAPPPPP--PSRGGPPPPPPPPHSSG 295
>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 501 Score = 24.6 bits (52), Expect(2) = 1.8 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = +3 Query: 153 PPPALTPMGR*RHPPPSAPATETDP 227 PPP+ P PPPS P P Sbjct: 309 PPPSRAPTAAPPPPPPSRPGVVVPP 333 Score = 24.3 bits (51), Expect(2) = 1.8 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +2 Query: 95 RTESAPPPPLDQAMGGAGPTTSSPHPHG 178 R ++ PPPP + GG P PH G Sbjct: 270 RRQAPPPPP--PSRGGPPPPPPPPHSSG 295
>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = -3 Query: 215 SGWCRRGRMPSSSHGGEGWRW*VRHHPWLDPAAAVA 108 +G C + H G RW R PWLDPAAA A Sbjct: 16 AGQCGPVGVRKEMHCGVASRW-RRRRPWLDPAAAAA 50
>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = -3 Query: 125 PAAAVARSPSVRPSVRPARSLSAGESCLPGDKHKPPIRPE 6 PA A ++P P +PA + G + P ++H PP + E Sbjct: 20 PAPASKKAPEPAPKEKPAPTPKEGHAPTPKEEHAPPPKEE 59
>GAG_MSVFR (P29175) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30] Length = 309 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDPR 230 W+KP+V P L P P+ PS P+T+ PR Sbjct: 95 WVKPFVSPKLSPSPTAPI------LPSGPSTQPPPR 124
>GAG_MLVMO (P03332) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30; Nucleoprotein p10] Length = 537 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDP 227 W+KP+V P PPP PPSAP+ +P Sbjct: 95 WVKPFVHPKPPPPL----------PPSAPSLPLEP 119
>GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] (Fragment) Length = 414 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATET 221 W++P++ P PP TP+ + P PSAP T + Sbjct: 170 WVRPFLPPPKPP---TPLPQPLSPQPSAPLTSS 199
>GAG_MLVAV (P03336) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30; Nucleoprotein p10] Length = 536 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDPR 230 W+KP+V P L P P+ PS P+T+ PR Sbjct: 95 WVKPFVSPKLSPSPTAPI------LPSGPSTQPPPR 124
>GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30; Core protein p10] Length = 536 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATET 221 W++P++ P PP TP+ + P PSAP T + Sbjct: 173 WVRPFLPPPKPP---TPLPQPLSPQPSAPPTSS 202
>IL2RA_PIG (O02733) Interleukin-2 receptor alpha chain precursor (IL-2| receptor alpha subunit) (IL-2-RA) (IL2-RA) (CD25 antigen) Length = 270 Score = 30.0 bits (66), Expect = 2.2 Identities = 15/57 (26%), Positives = 25/57 (43%) Frame = +1 Query: 37 PGRQLSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRPLLH 207 P +Q++P E+ R T G+ + G C+ PPWE E ++ + H Sbjct: 91 PVKQVTPRPEEQKERKTTETQGQMQPPNQANLPGHCKE-----PPPWEHESLKRVYH 142
>GAG_FSVST (P03338) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30] Length = 371 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATET 221 W++P++ P PP TP+ + P PSAP T + Sbjct: 170 WVRPFLPPPKPP---TPLPQPLSPQPSAPLTSS 199
>GAG_MLVAB (P03333) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30] Length = 234 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDP 227 W+KP+V P PPP PPSAP+ +P Sbjct: 95 WVKPFVHPKPPPPL----------PPSAPSLPLEP 119
>Y4MM_RHISN (P55572) Hypothetical protein y4mM precursor| Length = 541 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -3 Query: 173 GGEGWRW*VRHHPWLDPAAAVARSPSVRPSVRPAR---SLSAGESCLPGD 33 GGE ++ + +L ++AV +P++ VRPAR +L+ G PG+ Sbjct: 20 GGETMKYEITRRRFLAASSAVLAAPAIVTMVRPARAGTTLTLGHGAAPGN 69
>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (MHC class I regulatory element-binding protein H-2RIIBP) Length = 520 Score = 30.0 bits (66), Expect = 2.2 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = -3 Query: 215 SGWCRRGRMPSSSHGGEGWRW*VRHHPWLDPAAAVA 108 +G C + H G RW R PWLDPAAA A Sbjct: 16 AGQCGPVGVRKEMHCGVASRW-RRRRPWLDPAAAAA 50
>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein| p12; Core protein p30; Core protein p10] Length = 580 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATET 221 W++P++ P PP TP+ + P PSAP T + Sbjct: 170 WVRPFLPPPKPP---TPLPQPLSPQPSAPLTSS 199
>GAG_FRSFV (P03331) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12] Length = 186 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDPR 230 W+KP+V P L P P+ PS P+T+ PR Sbjct: 95 WVKPFVSPKLSPSPTAPI------LPSGPSTQPPPR 124
>SAM68_CHICK (Q8UUW7) KH domain-containing, RNA-binding, signal| transduction-associated protein 1 (Src-associated in mitosis 68 kDa protein) (Sam68) Length = 433 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +2 Query: 92 GRTESAPPPPLDQAMGGAGPTTSSPHPHGKMKASAP 199 GR + PPPP G GP P P G + AP Sbjct: 273 GRGAAPPPPPPVPRGRGVGPPPPPPPPRGALVRGAP 308
>AFSK_STRCO (P54741) Serine/threonine protein kinase afsK (EC 2.7.11.1)| Length = 799 Score = 29.6 bits (65), Expect = 2.9 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 5/61 (8%) Frame = +1 Query: 76 GRTDGRTDGERATAAAGSSHGWCRT-----YHLQPSPPWEDEGIRPLLHQPLRPTPASSS 240 GR +GR + AT A G HG + H P PP P H P+ P P + Sbjct: 294 GRRNGRPAVKPATTAGGRGHGHGPSGARAPVHAPPLPP-------PPAHDPVVPAPPAHV 346 Query: 241 P 243 P Sbjct: 347 P 347
>ZMPB_STRPN (Q9L7Q2) Zinc metalloprotease zmpB precursor (EC 3.4.24.-)| Length = 1906 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = -3 Query: 125 PAAAVARSPSVRPSVRPARSLS---AGESCLPGDKHKPPIRPEE 3 P VA P +PS +PA AGE P + K P+ PE+ Sbjct: 256 PEEKVAVKPESQPSDKPAEESKVEQAGEPVAPREDEKAPVEPEK 299
>IFD2_CAEEL (Q19782) Intermediate filament protein ifd-2 (Intermediate filament| protein D2) (IF-D2) (Cel IF D2) Length = 443 Score = 29.3 bits (64), Expect = 3.7 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 Query: 98 TESAPPPPLDQAMGGAGPTTSSPHPHG 178 T +APPPPL Q +GP T+S H +G Sbjct: 413 TYNAPPPPLPQ----SGPRTTSYHAYG 435
>LITAF_BRARE (Q6GMG8) Lipopolysaccharide-induced tumor necrosis factor-alpha| factor homolog (LPS-induced TNF-alpha factor homolog) Length = 163 Score = 29.3 bits (64), Expect = 3.7 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = +2 Query: 110 PPPPLDQAMGGAGP-TTSSPHPHGKMKASAP 199 PPPP + GA P + P+P MKAS P Sbjct: 20 PPPPSYDEISGANPYYPAGPYPPADMKASGP 50
>GAG_MSVMO (P03334) Gag polyprotein R65 [Contains: Core protein p15; Inner| coat protein p12; Core shell protein p30; Nucleoprotein p10] Length = 537 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDP 227 W+KP+V P PPP L PSAP+ +P Sbjct: 95 WVKPFVHPKPPPPLL----------PSAPSLPLEP 119
>UCP8_SCHPO (O94685) UBA domain-containing protein 8| Length = 884 Score = 28.9 bits (63), Expect = 4.9 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = +3 Query: 126 IKPWVVPDLPPPALTPMGR*RHPPPSAPATETDP 227 IKP V P P PA TP + HPPP + P Sbjct: 723 IKPQVTPAPPTPAPTPAVK-HHPPPPPVRSSISP 755
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 28.9 bits (63), Expect = 4.9 Identities = 22/66 (33%), Positives = 26/66 (39%) Frame = +1 Query: 1 FSSGRIGGLCLSPGRQLSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWE 180 FSS GG LSPA S A R +A+ SS + S E Sbjct: 354 FSSSSSGG----SDSDLSPARSPSAPRAPAAAAAAARRSASSSSSSSSSSSSSSSSEGEE 409 Query: 181 DEGIRP 198 DEG+RP Sbjct: 410 DEGVRP 415
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +2 Query: 107 APPPPLDQAMGGAGPTTSSPHPHG 178 A P P QA G G +PHPHG Sbjct: 873 AGPAPAAQAACGGGDDDDNPHPHG 896
>PALST_EUGGR (P84739) Photoactivated adenylate cyclase alpha-subunit-like protein| ST- Length = 1019 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 4/36 (11%) Frame = +1 Query: 172 PWEDEGIRP-LLHQPLRPTPASSS---PHRFFRRDE 267 PW DEG RP HQ L P P S PHR R E Sbjct: 959 PWLDEGHRPEAPHQSLHPGPGDPSEQHPHRPNRATE 994
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +2 Query: 104 SAPPPPLDQAMGGAGPTTSSPHPHGKMKASAP 199 + PPPP A GG P PH HG K P Sbjct: 611 ATPPPPPQGAAGGGYP--MPPHMHGGYKMGGP 640
>GAG_MSVMT (P32594) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30] Length = 467 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDP 227 W+KP+V P PPP L PSAP+ +P Sbjct: 95 WVKPFVHPKPPPPLL----------PSAPSLPLEP 119
>KCND3_RAT (Q62897) Potassium voltage-gated channel subfamily D member 3| (Voltage-gated potassium channel subunit Kv4.3) Length = 655 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 156 PPALTPMGR*RHPPPSAPATETD 224 PPALTP G R PPP++P T+ Sbjct: 620 PPALTPEGESR-PPPASPGPNTN 641
>KCND3_RABIT (Q9TTT5) Potassium voltage-gated channel subfamily D member 3| (Voltage-gated potassium channel subunit Kv4.3) Length = 655 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 156 PPALTPMGR*RHPPPSAPATETD 224 PPALTP G R PPP++P T+ Sbjct: 620 PPALTPEGETR-PPPASPGPNTN 641
>KCND3_MOUSE (Q9Z0V1) Potassium voltage-gated channel subfamily D member 3| (Voltage-gated potassium channel subunit Kv4.3) Length = 655 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 156 PPALTPMGR*RHPPPSAPATETD 224 PPALTP G R PPP++P T+ Sbjct: 620 PPALTPEGESR-PPPASPGPNTN 641
>KCND3_HUMAN (Q9UK17) Potassium voltage-gated channel subfamily D member 3| (Voltage-gated potassium channel subunit Kv4.3) Length = 655 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 156 PPALTPMGR*RHPPPSAPATETD 224 PPALTP G R PPP++P T+ Sbjct: 620 PPALTPEGESR-PPPASPGPNTN 641
>ISPE_MENPI (P56848) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase,| chloroplast precursor (EC 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 405 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = +2 Query: 263 MKSSTAAPSKGKAAFELKHKLVQALNKIADRDTHQIGLSEL 385 ++++ + P+ G+ E+ + L LNK+AD + G+S L Sbjct: 58 IRAAASDPTTGRNQLEVVYDLENKLNKLADEVDREAGISRL 98
>ZYX_MOUSE (Q62523) Zyxin| Length = 564 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 107 APPPPLDQAMGGAGPTTSSPHPHGKM 184 +PPPPL++ G PT P P K+ Sbjct: 117 SPPPPLEEEGGPEAPTQLPPQPREKV 142
>HLX1_MOUSE (Q61670) Homeobox protein HLX1| Length = 476 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1 Query: 55 PAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRPLLHQ 210 PAE ER R+ R++GE + ++ S + + PS EG LHQ Sbjct: 353 PAEGEREERSPSRSEGEAESESSDS-----ESLDMAPSDTERTEGTERSLHQ 399
>GAG_MLVF5 (P26807) Gag polyprotein (Core polyprotein) [Contains: Matrix| protein p15; RNA-binding phosphoprotein p12; Capsid protein p30; Nucleocapsid protein p10] Length = 538 Score = 28.5 bits (62), Expect = 6.4 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +3 Query: 123 WIKPWVVPDLPPPALTPMGR*RHPPPSAPATETDP 227 W+KP+V P PPP L PPSAP+ +P Sbjct: 95 WVKPFVHPK-PPPLLL--------PPSAPSLPPEP 120
>FREA_HUMAN (O43638) Forkhead-related transcription factor 10 (FREAC-10)| (Forkhead-like 18 protein) Length = 330 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +2 Query: 116 PPLDQAMGGAGPTTSSPHPHGKMKASAPFCTSH 214 P L+ + A P+ + P P G ++A P T H Sbjct: 263 PGLEHLLASAAPSPAPPTPPGSLRAPLPLPTDH 295
>FTSZ_STRGR (P45501) Cell division protein ftsZ| Length = 407 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +1 Query: 19 GGLCLSPGRQLSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWED 183 GGL P R+ SPA +E A ATA+ SS G H+ P+ P++D Sbjct: 350 GGLGSVPPREESPAPAEPA----------PATASGESSLGPVSPPHVPPARPYQD 394
>SEC16_SCHPO (O14029) Multidomain vesicle coat protein| Length = 1995 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 86 TDGRTESAPPPPLDQAMGGAGPTTSSP 166 +D ++APPPP A+ AGP +++P Sbjct: 1874 SDLSNQAAPPPPPPMALPKAGPPSAAP 1900
>RV167_YEAST (P39743) Reduced viability upon starvation protein 167| Length = 482 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = +1 Query: 100 GERATAAAGSSHGWCRTYHLQPSPPWEDEGIRPLLHQPLRPTPASSSP 243 G A AAAG+ G Y SPP G + Q P PA S+P Sbjct: 357 GTAAGAAAGAVPGTYPQYAAAQSPPLTGLGFQQSPQQQQGPPPAYSNP 404
>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) Length = 2350 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 160 QPSPPWEDEGIRPLLHQPLRPTPASSSPHR 249 QP+P +GI L H P+R P+S+ PHR Sbjct: 726 QPTPVTSADGIGLLSHIPVR--PSSAEPHR 753
>CHD3_HUMAN (Q12873) Chromodomain helicase-DNA-binding protein 3 (EC 3.6.1.-)| (ATP-dependent helicase CHD3) (CHD-3) (Mi-2 autoantigen 240 kDa protein) (Mi2-alpha) (Zinc-finger helicase) (hZFH) Length = 2000 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 58 AESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRPLLHQ 210 A+S+R+ R T T A +++ C + P+P + EGIR L + Sbjct: 1523 ADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEK 1573
>AMELY_PANTR (Q861X8) Amelogenin, Y isoform precursor (Fragment)| Length = 203 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 6/33 (18%) Frame = +1 Query: 148 TYHLQPS------PPWEDEGIRPLLHQPLRPTP 228 T H QP+ P++ + ++PL HQP++P P Sbjct: 127 TQHHQPNLPLPAQQPFQPQPVQPLPHQPMQPQP 159
>FBX2_HUMAN (Q9UK22) F-box only protein 2| Length = 296 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -3 Query: 245 CGDELAGVGLSGWCRRGRMPSSSHGGEGWR 156 CG+E L GWC HGG+GWR Sbjct: 128 CGEE----DLEGWC------DVEHGGDGWR 147
>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) (Thyroid receptor-interacting protein 8) (TRIP-8) Length = 2540 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 160 QPSPPWEDEGIRPLLHQPLRPTPASSSPHR 249 QP+P +GI L H P+R P+S+ PHR Sbjct: 907 QPTPVTSADGIGLLSHIPVR--PSSAEPHR 934
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 28.1 bits (61), Expect = 8.3 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 141 VPDLPPPALTPMGR*RHPPPSAPATETDP 227 +P PPA +P G+ PP APAT + P Sbjct: 490 MPRGKPPAPSPRGQKASPPTLAPATASPP 518
>IRX1_MOUSE (P81068) Iroquois-class homeodomain protein IRX-1 (Iroquois| homeobox protein 1) (Homeodomain protein IRXA1) Length = 480 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/42 (35%), Positives = 19/42 (45%) Frame = +2 Query: 89 DGRTESAPPPPLDQAMGGAGPTTSSPHPHGKMKASAPFCTSH 214 DG +++PPPP A GP + SP H S T H Sbjct: 327 DGAPKASPPPPSSHA-SAHGPPSGSPLQHPAFLPSHGLYTCH 367
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 28.1 bits (61), Expect = 8.3 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +1 Query: 49 LSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRP 198 LSPA S A R A++++ SS + S EDEG+RP Sbjct: 358 LSPARSPSAPRAPAAAARRSASSSSSSSSSSSSSSSSSSSEGEEDEGVRP 407
>GDB0_WHEAT (P08079) Gamma-gliadin precursor (Fragment)| Length = 251 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +1 Query: 157 LQPSPPWEDEGIRPLLHQPLRPTPASSSPHRFFRRDE 267 LQP P+ + +P QP +P P + P + F + + Sbjct: 78 LQPQQPFPQQPQQPYPQQPQQPFPQTQQPQQLFPQSQ 114
>CPB1_CAEBR (Q6E3D0) Cytoplasmic polyadenylation element-binding protein 1| Length = 585 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -3 Query: 128 DPAAAVARSPSVRPSVRPARSLSAGESCLPGDKHKP 21 DP A+V+ P++ P RP +S++ +SCL K +P Sbjct: 209 DPQASVSTRPTLVPLTRPLQSVA--QSCLDLTKKQP 242
>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) (Kinase deficient protein) Length = 2382 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Frame = +1 Query: 40 GRQLSPAESERAGRTDGRTDGERATAAAGSSHGWCRTYHLQPSPPWEDEGIRP-----LL 204 GR+ P +S+ + + + G ++ +G+ G L P G P L Sbjct: 2122 GRRRRPTKSKGSKSSRSSSLGNKSPQLSGNLSGQSAASVLHPQQTLHPPGNIPESGQNQL 2181 Query: 205 HQPLRPTPASSSPHRFFRRD 264 QPL+P+P+S + + F D Sbjct: 2182 LQPLKPSPSSDNLYSAFTSD 2201
>MUSC_MOUSE (O88940) Musculin (Myogenic repressor)| Length = 201 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 284 GRPCWTSSRRKKRCGDELAGVGLSGWCRRGRMPSSSHGGEGWR 156 G P SS ++ +E +G +G C+R R+ + GG G R Sbjct: 39 GSPSDISSAEEEDGEEEPGSLGAAGGCKRKRLRGADAGGAGGR 81
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 28.1 bits (61), Expect = 8.3 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +3 Query: 138 VVPDLPPPALTPMGR*RH--PPPSAPATETDPRQLV 239 VVP+LP P++TP+ + P P AP+ +P Q V Sbjct: 429 VVPELPGPSVTPVPQLSQELPGPPAPSMGLEPPQEV 464 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.137 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,721,879 Number of Sequences: 219361 Number of extensions: 1256080 Number of successful extensions: 6633 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 5338 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6571 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
