Clone Information

BLAST Search Result

Clone Name	bastl39h07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1	153	2e-37
2	UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2	151	8e-37
3	UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3	113	2e-25
4	UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1	89	6e-18
5	UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)	89	6e-18
6	UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1	87	2e-17
7	UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1	80	2e-15
8	UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ R...	76	3e-14
9	UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)	73	3e-13
10	ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUM...	62	5e-10
11	ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUM...	62	6e-10
12	HESA1_ANAVT (P46049) Protein hesA, heterocyst	45	6e-05
13	UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit...	44	1e-04
14	ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subuni...	42	5e-04
15	HESA2_ANAVT (P46048) Protein hesA, vegetative	42	6e-04
16	RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 h...	40	0.002
17	HESA_ANASP (P18500) Protein hesA	40	0.003
18	HESA_PLEBO (P46037) Protein hesA	40	0.003
19	UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit...	39	0.004
20	ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subuni...	39	0.005
21	ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subuni...	39	0.007
22	THIF_ECOLI (P30138) Adenylyltransferase thiF (EC 2.7.7.-)	38	0.009
23	ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUM...	38	0.009
24	ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUM...	38	0.009
25	ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subuni...	38	0.012
26	ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit ...	38	0.012
27	ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subuni...	38	0.012
28	RAD31_SCHPO (P79064) DNA damage tolerance protein rad31	37	0.016
29	ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subuni...	37	0.021
30	ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subuni...	37	0.027
31	MOEB_HAEIN (P45211) Molybdopterin biosynthesis protein moeB	36	0.035
32	ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit	35	0.061
33	UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (...	35	0.079
34	UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit...	35	0.079
35	MOEB_ECOLI (P12282) Molybdopterin biosynthesis protein moeB	35	0.079
36	UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit...	35	0.079
37	UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit...	35	0.079
38	ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subuni...	35	0.10
39	UBA3_YEAST (Q99344) NEDD8-activating enzyme E1 catalytic subunit...	34	0.13
40	MOCS3_HUMAN (O95396) Molybdenum cofactor synthesis protein 3 (Mo...	34	0.18
41	MOEB_SALTY (Q56067) Molybdopterin biosynthesis protein moeB	32	0.51
42	UBA3_DROME (Q9V6U8) NEDD8-activating enzyme E1 catalytic subunit...	32	0.51
43	MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Mol...	31	1.1
44	ATG7_EMENI (Q5AWA2) Autophagy-related protein 7 (Autophagy-relat...	31	1.5
45	IWS1_ASPFU (Q4WSM6) Transcription factor iws1	30	1.9
46	ULA1_YEAST (Q12059) NEDD8-activating enzyme E1 regulatory subuni...	30	2.5
47	YABA_SCHPO (Q09810) Hypothetical protein C2G11.10c in chromosome I	30	2.5
48	YGDL_ECOLI (Q46927) Hypothetical protein ygdL	30	2.5
49	TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Pr...	29	4.3
50	RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC ...	29	5.7
51	RPOC_BACSK (Q5WLR9) DNA-directed RNA polymerase beta' chain (EC ...	28	7.4
52	ATG7_ASHGO (Q756G8) Autophagy-related protein 7 (Autophagy-relat...	28	7.4
53	AROC_STRA5 (Q8DYU6) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...	28	7.4
54	AROC_STRA3 (Q8E4F4) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...	28	7.4
55	RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC ...	28	9.7
56	Y1179_BARQU (Q6FYQ2) UPF0082 protein BQ11790	28	9.7
57	RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC ...	28	9.7
58	RPOC_LEUPS (P94899) DNA-directed RNA polymerase beta' chain (EC ...	28	9.7

>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1|
          Length = 1051

 Score =  153 bits (387), Expect = 2e-37
 Identities = 83/106 (78%), Positives = 84/106 (79%), Gaps = 5/106 (4%)
 Frame = +1

Query: 127 MLPRKREIVASEVENQQKKARPXXXXXX-----XXXXGRPTEIDEDLHSRQLAVYGRETM 291
           MLPRKREIVA EVE+ QKK R                GR  EIDEDLHSRQLAVYGRETM
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEVTREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60

Query: 292 KRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 429
           KRLF SNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS
Sbjct: 61  KRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 106



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
 Frame = +1

Query: 253 HSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVK-----SVTLHDDGNVEL 417
           +  Q++V+G +   +L  + + + G   LG E  KNL L G+      ++TL DD  +E 
Sbjct: 445 YDAQISVFGSKLQNKLEEAKIFMVGSGALGCEFLKNLALMGISCSQNGNLTLTDDDVIEK 504

Query: 418 WDLSKQ 435
            +LS+Q
Sbjct: 505 SNLSRQ 510

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>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2|
          Length = 1051

 Score =  151 bits (381), Expect = 8e-37
 Identities = 82/106 (77%), Positives = 83/106 (78%), Gaps = 5/106 (4%)
 Frame = +1

Query: 127 MLPRKREIVASEVENQQKKARPXXXXXX-----XXXXGRPTEIDEDLHSRQLAVYGRETM 291
           MLPRKREIVA EVE+ QKK R                GR  EIDEDLHSRQLAVYGRETM
Sbjct: 1   MLPRKREIVAGEVEDLQKKTRAGEGEATREEGDAAMAGRGNEIDEDLHSRQLAVYGRETM 60

Query: 292 KRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 429
           K LF SNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS
Sbjct: 61  KPLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 106



 Score = 37.0 bits (84), Expect = 0.021
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = +1

Query: 253 HSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVK-----SVTLHDDGNVEL 417
           +  Q++V+G     +L  + + + G   LG E  KNL L G+      ++T+ DD  +E 
Sbjct: 445 YDAQISVFGSTLQNKLEEAKIFMVGSGALGCEFLKNLALMGISCSQNGNLTVTDDDVIEK 504

Query: 418 WDLSKQ 435
            +LS+Q
Sbjct: 505 SNLSRQ 510

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>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3|
          Length = 1053

 Score =  113 bits (283), Expect = 2e-25
 Identities = 63/109 (57%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
 Frame = +1

Query: 127 MLPRKREIVASEVENQQK--------KARPXXXXXXXXXXGRPTEIDEDLHSRQLAVYGR 282
           MLP KR   A+  +   +          R             P EIDEDLHSRQLAVYGR
Sbjct: 1   MLPSKRPSDAAAGDENGRGGDARGPGSGRRRARAAAGAVTAAPQEIDEDLHSRQLAVYGR 60

Query: 283 ETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 429
           ETM+RLFAS+VLVSGL GLGAEIAKNL LAGVKSVT+HD   V++WDLS
Sbjct: 61  ETMRRLFASDVLVSGLNGLGAEIAKNLALAGVKSVTIHDVKTVKMWDLS 109



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
 Frame = +1

Query: 253 HSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVK-----SVTLHDDGNVEL 417
           +  Q++V+G +  K++  +N  V G   LG E  KNL L GV       +T+ DD  +E 
Sbjct: 448 YDAQVSVFGSKLQKKMEEANTFVVGSGALGCEFLKNLALMGVSCSSKGKLTITDDDIIEK 507

Query: 418 WDLSKQ 435
            +LS+Q
Sbjct: 508 SNLSRQ 513

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>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1|
          Length = 1058

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 223 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDD 402
           G   +IDE L+SRQL V G E MKRL  S+VLVSGL+GLG EIAKN++L GVK+VTLHD 
Sbjct: 45  GSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQ 104

Query: 403 GNVELWDLSKQ 435
           G  +  DLS Q
Sbjct: 105 GTAQWADLSSQ 115

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>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)|
          Length = 1058

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 223 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDD 402
           G   +IDE L+SRQL V G E MKRL  S+VLVSGL+GLG EIAKN++L GVK+VTLHD 
Sbjct: 45  GSEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQ 104

Query: 403 GNVELWDLSKQ 435
           G  +  DLS Q
Sbjct: 105 GTAQWADLSSQ 115

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>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1|
          Length = 1058

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 44/71 (61%), Positives = 52/71 (73%)
 Frame = +1

Query: 223 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDD 402
           G   +IDE L+SRQL V G E MK L  S+VLVSGL+GLG EIAKN++L GVK+VTLHD 
Sbjct: 45  GSEADIDESLYSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQ 104

Query: 403 GNVELWDLSKQ 435
           G  +  DLS Q
Sbjct: 105 GTTQWADLSSQ 115

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>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1|
          Length = 1024

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 42/67 (62%), Positives = 52/67 (77%)
 Frame = +1

Query: 235 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVE 414
           EIDE L+SRQL V G+E M ++  SNVL+ GL+GLG EIAKN+VLAGVKS+T+ D   V+
Sbjct: 13  EIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQ 72

Query: 415 LWDLSKQ 435
           L DLS Q
Sbjct: 73  LADLSTQ 79

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>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport|
           protein 3)
          Length = 1012

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 40/66 (60%), Positives = 48/66 (72%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVEL 417
           IDE L+SRQL V G E MK++  SNVL+ G +GLG EIAKN+ LAGVKSVTL+D     +
Sbjct: 15  IDEGLYSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRI 74

Query: 418 WDLSKQ 435
            DLS Q
Sbjct: 75  EDLSSQ 80

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>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 39/66 (59%), Positives = 48/66 (72%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVEL 417
           +DE+L+SRQL V G   M+R+  + VLVSGLQGLGAE+AKNLVL GV S+TLHD      
Sbjct: 10  LDEELYSRQLYVLGSPAMQRIQGARVLVSGLQGLGAEVAKNLVLMGVGSLTLHDPHPTCW 69

Query: 418 WDLSKQ 435
            DL+ Q
Sbjct: 70  SDLAAQ 75

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>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 350

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 34/71 (47%), Positives = 46/71 (64%)
 Frame = +1

Query: 223 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDD 402
           G  +E +   + RQ+ ++G E  KRL AS VL+ G++GLGAEIAKNL+LAGVK +T+ D 
Sbjct: 13  GGISEEEAAQYDRQIRLWGLEAQKRLRASRVLIVGMKGLGAEIAKNLILAGVKGLTMLDH 72

Query: 403 GNVELWDLSKQ 435
             V   D   Q
Sbjct: 73  EQVSPEDPGAQ 83

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>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating|
           enzyme subunit 1)
          Length = 346

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 33/63 (52%), Positives = 44/63 (69%)
 Frame = +1

Query: 223 GRPTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDD 402
           G  +E +   + RQ+ ++G E  KRL AS VL+ GL+GLGAEIAKNL+LAGVK +T+ D 
Sbjct: 9   GGISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDH 68

Query: 403 GNV 411
             V
Sbjct: 69  EQV 71

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>HESA1_ANAVT (P46049) Protein hesA, heterocyst|
          Length = 267

 Score = 45.4 bits (106), Expect = 6e-05
 Identities = 25/69 (36%), Positives = 39/69 (56%)
 Frame = +1

Query: 229 PTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGN 408
           PTE++       L  +G    KRL ++ VLV+G+ GLG   A  L +AGV  + L   G+
Sbjct: 6   PTELERYSRQMMLPNFGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGRLILVRGGD 65

Query: 409 VELWDLSKQ 435
           + L D+++Q
Sbjct: 66  LRLDDMNRQ 74

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>UBA3_SCHPO (Q09765) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme E1 3)
          Length = 444

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 35/51 (68%)
 Frame = +1

Query: 283 ETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           ET+K  F+S +L+ G  GLG EI K+L L+G + +++ D   +++ +L++Q
Sbjct: 37  ETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQ 87

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>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
          Length = 541

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 22/60 (36%), Positives = 35/60 (58%)
 Frame = +1

Query: 253 HSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSK 432
           + RQ+ ++G E    + +++  V G   L  EI K+LVLAGV+S  + DD  VE  D+ +
Sbjct: 10  YDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIGQ 69

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>HESA2_ANAVT (P46048) Protein hesA, vegetative|
          Length = 265

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 24/68 (35%), Positives = 39/68 (57%)
 Frame = +1

Query: 232 TEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           TE++       L  +G+E  +RL ++ VLV+G+ GLG   A  L +AGV  + L   G +
Sbjct: 7   TELERYRRQIILPGFGQEAQQRLKSATVLVTGVGGLGGTAALYLAIAGVGRLILVRGGEL 66

Query: 412 ELWDLSKQ 435
            L D+++Q
Sbjct: 67  RLDDMNRQ 74

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>RHC31_YEAST (Q06624) DNA damage tolerance protein RHC31 (RAD31 homolog)|
          Length = 347

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/62 (32%), Positives = 36/62 (58%)
 Frame = +1

Query: 250 LHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 429
           L+ RQ+ ++G      + ++ VL+  L  +G+EI K++VL+G+  +T+ D   V   DL 
Sbjct: 15  LYDRQIRLWGMTAQANMRSAKVLLINLGAIGSEITKSIVLSGIGHLTILDGHMVTEEDLG 74

Query: 430 KQ 435
            Q
Sbjct: 75  SQ 76

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>HESA_ANASP (P18500) Protein hesA|
          Length = 252

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +1

Query: 274 YGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           +G    KRL ++ VLV+G+ GLG   A  L +AGV  + L   G++ L D+++Q
Sbjct: 6   FGEAAQKRLKSATVLVTGVGGLGGTAALYLAVAGVGRLILVRGGDLRLDDMNRQ 59

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>HESA_PLEBO (P46037) Protein hesA|
          Length = 277

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 21/69 (30%), Positives = 36/69 (52%)
 Frame = +1

Query: 229 PTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGN 408
           PTE++       L  +  +  +RL +   LV+G+ GLG   A  L +AG+  + L   G 
Sbjct: 6   PTELERYRRQMMLPGFDEDAQRRLKSFTALVTGVGGLGGTAALYLAVAGIGKLILVRGGE 65

Query: 409 VELWDLSKQ 435
           + L D+++Q
Sbjct: 66  LRLDDMNRQ 74

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>UBA3_CAEEL (Q19360) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3 homolog) (Ectopic
           membrane ruffles in embryo protein 1)
          Length = 430

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/55 (34%), Positives = 34/55 (61%)
 Frame = +1

Query: 271 VYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           V G E  + L  + +LV G  GLG E+ KNL L+G +++ + D   +++ +L++Q
Sbjct: 31  VPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQ 85

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>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 535

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           + E  + RQL ++G    + L +++V V      G EI KNLVL G+ S T+ D   V
Sbjct: 9   LKEQRYDRQLRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGSFTIVDGNRV 66

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>ULA1_ARATH (P42744) NEDD8-activating enzyme E1 regulatory subunit|
           (Auxin-resistance protein AXR1)
          Length = 540

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 229 PTEID-EDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDG 405
           PT ++ +  + RQL ++G      L  +++ +      G+E  KNLVL GV S+T+ D  
Sbjct: 15  PTMVEPKTKYDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSITVVDGS 74

Query: 406 NVELWDL 426
            V+  DL
Sbjct: 75  KVQFGDL 81

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>THIF_ECOLI (P30138) Adenylyltransferase thiF (EC 2.7.7.-)|
          Length = 251

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = +1

Query: 253 HSRQLAV--YGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 426
           +SRQ+ +     +  ++L  S VL+ GL GLG   A  L  AGV ++ L DD +V L +L
Sbjct: 9   YSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNL 68

Query: 427 SKQ 435
            +Q
Sbjct: 69  QRQ 71

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>ULE1B_HUMAN (Q9UBT2) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 640

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +1

Query: 280 RETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           RE  + +    VLV G  G+G E+ KNLVL G   + L D   +++ +L++Q
Sbjct: 9   RELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQ 60

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>ULE1B_MOUSE (Q9Z1F9) Ubiquitin-like 1-activating enzyme E1B (SUMO-1-activating|
           enzyme subunit 2) (Anthracycline-associated resistance
           ARX)
          Length = 638

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +1

Query: 280 RETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           RE  + +    VLV G  G+G E+ KNLVL G   + L D   +++ +L++Q
Sbjct: 9   RELAEAVSGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQ 60

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>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 510

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           + E  + RQL ++G    + L +++V +      G EI KNLVL G+ S T+ D   V
Sbjct: 8   LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQV 65

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>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           + E  + RQL ++G    + L +++V +      G EI KNLVL G+ S T+ D   V
Sbjct: 8   LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQV 65

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>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
           (Protooncogene protein 1) (HPP1)
          Length = 534

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           + E  + RQL ++G    + L +++V +      G EI KNLVL G+ S T+ D   V
Sbjct: 8   LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQV 65

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>RAD31_SCHPO (P79064) DNA damage tolerance protein rad31|
          Length = 307

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +1

Query: 250 LHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLS 429
           L+ RQ+ ++G    + L  S VL+     L  EIAKNLVL+G+  + + D   V   D+ 
Sbjct: 13  LYDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGIGKLCVLDSMTVYEKDVE 72

Query: 430 KQ 435
           +Q
Sbjct: 73  EQ 74

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>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 37.0 bits (84), Expect = 0.021
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           + E  + RQL ++G    + L +++V +      G EI KNLVL G+ S T+  DGN+
Sbjct: 8   LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTI-IDGNL 64

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>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 36.6 bits (83), Expect = 0.027
 Identities = 22/58 (37%), Positives = 32/58 (55%)
 Frame = +1

Query: 238 IDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           I E  + RQL ++G    + L +++V +      G EI KNLVL G+   T+  DGNV
Sbjct: 7   IKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGLFTI-VDGNV 63

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>MOEB_HAEIN (P45211) Molybdopterin biosynthesis protein moeB|
          Length = 243

 Score = 36.2 bits (82), Expect = 0.035
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = +1

Query: 292 KRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           ++L AS +L+ GL GLG   ++ L  AGV ++TL D   V L +L +Q
Sbjct: 27  EKLKASKMLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQ 74

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>ULA1_DROME (Q9VTE9) NEDD8-activating enzyme E1 regulatory subunit|
          Length = 524

 Score = 35.4 bits (80), Expect = 0.061
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +1

Query: 253 HSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 426
           + RQ+ ++G      L A+ V +  +  +G E AK LVL G+   T+ D   V+  DL
Sbjct: 18  YDRQIRLWGEHGQTLLEAATVCLVNVTAVGCETAKGLVLPGIGGFTVADGSTVKEEDL 75

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>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 462

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           VLV G  GLG E+ KNL L+G + + + D   +++ +L++Q
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112

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>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 462

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           VLV G  GLG E+ KNL L+G + + + D   +++ +L++Q
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112

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>MOEB_ECOLI (P12282) Molybdopterin biosynthesis protein moeB|
          Length = 249

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 22/53 (41%), Positives = 31/53 (58%)
 Frame = +1

Query: 277 GRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           G+E +K    S VL+ GL GLG   ++ L  AGV ++TL D   V L +L +Q
Sbjct: 25  GQEALKD---SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQ 74

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>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 463

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           VLV G  GLG E+ KNL L+G + + + D   +++ +L++Q
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112

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>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme
           E1C) (Ubiquitin-activating enzyme E1C)
          Length = 463

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           VLV G  GLG E+ KNL L+G + + + D   +++ +L++Q
Sbjct: 72  VLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQ 112

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>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +1

Query: 229 PTEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGN 408
           P    E  + RQL ++G    + L  ++V +      G EI KNLVL G+ + T+ D   
Sbjct: 4   PKTSKEQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGIGAFTIVDGHK 63

Query: 409 V 411
           V
Sbjct: 64  V 64

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>UBA3_YEAST (Q99344) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme E1 3) (RUB1-activating
           enzyme E1) (Ubiquitin-like protein-activating enzyme)
          Length = 299

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNL-VLAGVKSVTLHDDGNVELWDLSKQ 435
           +LV G  GLG EI KNL +L+ VK V + D   +EL +L++Q
Sbjct: 5   ILVLGAGGLGCEILKNLTMLSFVKQVHIVDIDTIELTNLNRQ 46

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>MOCS3_HUMAN (O95396) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 460

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +1

Query: 253 HSRQLAV--YGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 426
           +SRQL +   G     RL  + VL+ G  GLG  +A+ L  AGV  + L D   VE+ +L
Sbjct: 63  YSRQLVLPELGVHGQLRLGTACVLIVGCGGLGCPLAQYLAAAGVGRLGLVDYDVVEMSNL 122

Query: 427 SKQ 435
           ++Q
Sbjct: 123 ARQ 125

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>MOEB_SALTY (Q56067) Molybdopterin biosynthesis protein moeB|
          Length = 249

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 253 HSRQLAVYGR--ETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 426
           ++RQ+ + G   E  + L  + VLV GL GLG    + L  AGV  +TL D   V + +L
Sbjct: 12  YNRQIILRGFDFEGQEALKDARVLVVGLGGLGCAATQYLAGAGVGQLTLLDFDTVSVSNL 71

Query: 427 SKQ 435
            +Q
Sbjct: 72  QRQ 74

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>UBA3_DROME (Q9V6U8) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)|
           (Ubiquitin-activating enzyme 3 homolog)
          Length = 450

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           VL+ G  GLG E+ K+L L G  ++ + D   +EL +L++Q
Sbjct: 51  VLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQ 91

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>MOC3_ARATH (Q9ZNW0) Molybdenum cofactor synthesis protein 3 (Molybdopterin|
           synthase sulfurylase) (MPT synthase sulfurylase)
          Length = 464

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 253 HSRQLAV--YGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDL 426
           +SRQL +  +  E    L  S+VLV G  GLG+     L   GV  + + D   VEL ++
Sbjct: 72  YSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDHDVVELNNM 131

Query: 427 SKQ 435
            +Q
Sbjct: 132 HRQ 134

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>ATG7_EMENI (Q5AWA2) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme atg7)
          Length = 617

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/41 (31%), Positives = 27/41 (65%)
 Frame = +1

Query: 289 MKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           ++++  +  L+ G   LG+ +A+NL+  GV+ +T  D+G+V
Sbjct: 332 LEKIKGTKCLLLGAGTLGSYVARNLMAWGVRKITFVDNGSV 372

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>IWS1_ASPFU (Q4WSM6) Transcription factor iws1|
          Length = 460

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +1

Query: 136 RKREIVASEVENQQKKARPXXXXXXXXXXGRPTEIDEDLHSRQLAVYGRETMKRLFASNV 315
           R RE++   + N   +ARP           RPT + E   +R L   G +  +R+ A  +
Sbjct: 396 RSRELLPPRLAN---RARPEITHTSYTIVPRPTVVQESKFARPLGASGEDRFRRMRARQI 452

Query: 316 LVS 324
             S
Sbjct: 453 AAS 455

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>ULA1_YEAST (Q12059) NEDD8-activating enzyme E1 regulatory subunit|
           (Ubiquitin-like activation protein 1)
           (Ubiquitin-activating enzyme E1-like 1) (E1
           N-terminus-related protein 2)
          Length = 462

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 253 HSRQLAVYGRETMKRLFASNVLVSG-LQGLGAEIAKNLVLAGVKSVT 390
           + RQL ++G      L  S V V G    L  E+ KNLVLAG+ S+T
Sbjct: 4   YDRQLRLWGALGQDSLNRSRVCVVGPATPLLQEVFKNLVLAGISSLT 50

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>YABA_SCHPO (Q09810) Hypothetical protein C2G11.10c in chromosome I|
          Length = 401

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = +1

Query: 262 QLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           ++ + G+ ++KR   S+VLV G  GLG    + LV AG+ ++ + D   V+  +L +Q
Sbjct: 32  EIGLPGQLSLKR---SSVLVIGAGGLGCPAMQYLVAAGIGTLGIMDGDVVDKSNLHRQ 86

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>YGDL_ECOLI (Q46927) Hypothetical protein ygdL|
          Length = 268

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/55 (25%), Positives = 33/55 (60%)
 Frame = +1

Query: 271 VYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSKQ 435
           +YG + ++    +++ V G+ G+G+  A+ L   G+ ++TL D  +V + + ++Q
Sbjct: 19  LYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQ 73

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>TTLL7_HUMAN (Q6ZT98) Tubulin--tyrosine ligase-like protein 7 (Protein NYD-SP30)|
          Length = 887

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -2

Query: 353 AISAPRPWSPDTRTLEAKRRFIVSRPYTA--SWRLWRSSSISVGLP 222
           +ISA  P S DTR   A++   VSRP +A  S  L R+SS    LP
Sbjct: 607 SISAQSPSSGDTRPFSAQQMISVSRPTSASRSHSLNRASSYMRHLP 652

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>RPOC_WEIHE (P96177) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1046

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = +1

Query: 235 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTL 393
           E+ E L+ R L  Y ++++      + LV   + +  +IAK ++ AGV +VT+
Sbjct: 768 EVIESLYERILGRYAQKSVFEPQTGDKLVGHNEMITEDIAKRIIEAGVTTVTI 820

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>RPOC_BACSK (Q5WLR9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1206

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 232 TEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTL 393
           TE  E L+ R +     +T++      VLV   + +  + AK +V AGV+SVT+
Sbjct: 833 TETIEGLYDRLVGRVAFKTVRHPETDEVLVRRGELMNEDTAKQIVDAGVESVTI 886

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>ATG7_ASHGO (Q756G8) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 625

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +1

Query: 313 VLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNV 411
           VL+ G   LG  +A++L+  GV+ +T  D+G+V
Sbjct: 318 VLLLGAGTLGCYVARSLLAWGVRKITFVDNGSV 350

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>AROC_STRA5 (Q8DYU6) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 388

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 244 EDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVE 414
           +DL +       RET  R+    +    L+ +G EIA ++V+ G K +T+ D   V+
Sbjct: 122 DDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQ 178

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>AROC_STRA3 (Q8E4F4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 388

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 244 EDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVE 414
           +DL +       RET  R+    +    L+ +G EIA ++V+ G K +T+ D   V+
Sbjct: 122 DDLRNALERSSARETTMRVAIGAIAKRILKEIGIEIANHIVVFGGKEITVPDKLTVQ 178

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>RPOC_LISGR (P77882) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1053

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/54 (27%), Positives = 29/54 (53%)
 Frame = +1

Query: 232 TEIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTL 393
           TEI E L  R    Y R+T++    + ++V     +  +IA  ++ AG++ V++
Sbjct: 833 TEIIEPLEERLEGRYARKTIRHPETNEIIVKENDLITEDIAVQIIGAGIEEVSI 886

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>Y1179_BARQU (Q6FYQ2) UPF0082 protein BQ11790|
          Length = 248

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 336 ALESGYEDVGGEETLHCLAAVYGELAAVEVLVDLR 232
           A+E+G EDV  EET H +   +  L  V  +++ +
Sbjct: 155 AIEAGAEDVQSEETGHSITCAFENLGEVSKMLEAK 189

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>RPOC_WEIPA (P96178) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 1054

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +1

Query: 235 EIDEDLHSRQLAVYGRETMKRLFASNVLVSGLQGLGAEIAKNLVLAGVKSVTL 393
           E+ E L+ R L  Y ++++        LV+  + +  +IAK ++ AG+ +VT+
Sbjct: 768 EVIEPLYERILGRYAQKSVFDPETGETLVNHNEMITEDIAKRIIEAGITTVTI 820

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>RPOC_LEUPS (P94899) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit) (Fragment)
          Length = 989

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +1

Query: 232 TEIDEDLHSRQLAVYGRETMKRLF---ASNVLVSGLQGLGAEIAKNLVLAGVKSVTL 393
           T + E L+ R   + GR  MK +F       +VS  + +  ++AK +V AG++ VT+
Sbjct: 767 TSVVEPLYDR---ILGRYAMKSVFDPETGEKIVSRNEMIDEDVAKAIVNAGIEEVTI 820


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,784,994
Number of Sequences: 219361
Number of extensions: 547470
Number of successful extensions: 3483
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3476
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result