ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39h03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 173 cgatgccgtcgctctcctgccacaacctgctcgacct 209 ||||||| |||||||||||||||||||| |||||||| Sbjct: 33588051 cgatgccttcgctctcctgccacaacctcctcgacct 33588087 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 326 tcgtctcgcaccgcctccccctccgcgcgtccccggaccccgcggccccgttcgggttca 385 |||| |||||||||||||| |||||||| | | ||| | ||| | |||||||||||| Sbjct: 33588210 tcgtgtcgcaccgcctcccgctccgcgccgcggccgacgcggcgtcgccgttcgggttct 33588269 Query: 386 ggttcaccgtcgacgcgggcaccgtcgcctaccaactccgctcgggcctgccc 438 ||||| || ||| ||| | ||||||| ||||| ||||||||||| |||||| Sbjct: 33588270 ccttcacggttgactcggacgccgtcgcgtaccagctccgctcggggctgccc 33588322 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 4966691 ccgctgccgccgtccccgctccgcc 4966667 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cctccccctcctcgccggcg 291 |||||||||||||||||||| Sbjct: 35462157 cctccccctcctcgccggcg 35462138 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cctcgccggcgtccccgtcc 300 |||||||||||||||||||| Sbjct: 10865718 cctcgccggcgtccccgtcc 10865699
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 173 cgatgccgtcgctctcctgccacaacctgctcgacct 209 ||||||| |||||||||||||||||||| |||||||| Sbjct: 58722 cgatgccttcgctctcctgccacaacctcctcgacct 58758 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 326 tcgtctcgcaccgcctccccctccgcgcgtccccggaccccgcggccccgttcgggttca 385 |||| |||||||||||||| |||||||| | | ||| | ||| | |||||||||||| Sbjct: 58881 tcgtgtcgcaccgcctcccgctccgcgccgcggccgacgcggcgtcgccgttcgggttct 58940 Query: 386 ggttcaccgtcgacgcgggcaccgtcgcctaccaactccgctcgggcctgccc 438 ||||| || ||| ||| | ||||||| ||||| ||||||||||| |||||| Sbjct: 58941 ccttcacggttgactcggacgccgtcgcgtaccagctccgctcggggctgccc 58993
>dbj|AK065160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C03, full insert sequence Length = 557 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 173 cgatgccgtcgctctcctgccacaacctgctcgacct 209 ||||||| |||||||||||||||||||| |||||||| Sbjct: 169 cgatgccttcgctctcctgccacaacctcctcgacct 205
>ref|XM_468201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2253 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 175 atgccgtcgctctcctgccacaacctgctcgacct 209 ||||| |||||||||||||||||||| |||||||| Sbjct: 1 atgccttcgctctcctgccacaacctcctcgacct 35 Score = 50.1 bits (25), Expect = 0.006 Identities = 91/113 (80%) Strand = Plus / Plus Query: 326 tcgtctcgcaccgcctccccctccgcgcgtccccggaccccgcggccccgttcgggttca 385 |||| |||||||||||||| |||||||| | | ||| | ||| | |||||||||||| Sbjct: 158 tcgtgtcgcaccgcctcccgctccgcgccgcggccgacgcggcgtcgccgttcgggttct 217 Query: 386 ggttcaccgtcgacgcgggcaccgtcgcctaccaactccgctcgggcctgccc 438 ||||| || ||| ||| | ||||||| ||||| ||||||||||| |||||| Sbjct: 218 ccttcacggttgactcggacgccgtcgcgtaccagctccgctcggggctgccc 270
>emb|CR932777.1| Human DNA sequence from clone XX-NCIH2171_7H20, complete sequence Length = 115459 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 272 cctccccctcctcgccggcgtccccgtccc 301 ||||||||||||||||||||||| |||||| Sbjct: 37913 cctccccctcctcgccggcgtccgcgtccc 37884
>gb|M57946.1|CHPTPI P.troglodytes triose-phosphate isomerase (TPI) gene, complete cds Length = 4957 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 272 cctccccctcctcgccggcgtccccgtccc 301 ||||||||||||||||||||||| |||||| Sbjct: 1189 cctccccctcctcgccggcgtccgcgtccc 1218
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 195 caacctgctcgacctggccgagg 217 ||||||||||||||||||||||| Sbjct: 207484 caacctgctcgacctggccgagg 207462
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 195 caacctgctcgacctggccgagg 217 ||||||||||||||||||||||| Sbjct: 4219827 caacctgctcgacctggccgagg 4219849 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 cacaacctgctcgacctggccgaggagg 220 |||| |||||||||||||| |||||||| Sbjct: 1453955 cacagcctgctcgacctggtcgaggagg 1453982
>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete sequence Length = 79274 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cttctcccccctccatcctccctccgtcct 85 |||||||||||||| |||||||||| |||| Sbjct: 74212 cttctcccccctccctcctccctccctcct 74183
>emb|AL353803.23| Human DNA sequence from clone RP11-65J3 on chromosome 9 Contains three novel genes, the 5' end of a novel gene, a novel pseudogene and seven CpG islands, complete sequence Length = 165696 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 58 tctcccccctccatcctccctccgtcctcc 87 ||||||||||||| ||||||||| |||||| Sbjct: 135906 tctcccccctccagcctccctccctcctcc 135935
>gb|AC147283.3| Pan troglodytes BAC clone RP43-94K2 from chromosome 7, complete sequence Length = 171112 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 56 cttctcccccctccatcctccctccgtcct 85 ||||||| ||||||||||||||||| |||| Sbjct: 105982 cttctcctccctccatcctccctccctcct 106011
>gb|U47924.1|HSU47924 Human chromosome 12p13 sequence, complete sequence Length = 222930 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 272 cctccccctcctcgccggcgtccccgtccc 301 ||||||| ||||||||||||||| |||||| Sbjct: 80114 cctccccttcctcgccggcgtccgcgtccc 80143
>gb|AC083861.2|AC083861 Homo sapiens chromosome 7 clone RP11-164E6, complete sequence Length = 147288 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cttctcccccctccatcctccctccgtcct 85 ||||||| ||||||||||||||||| |||| Sbjct: 36891 cttctcctccctccatcctccctccctcct 36862
>gb|AE004549.1| Pseudomonas aeruginosa PAO1, section 110 of 529 of the complete genome Length = 10375 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 208 ctggccgaggaggtgccgccgctgcccccgtccc 241 |||||||||||||||| ||||||| |||||||| Sbjct: 1709 ctggccgaggaggtgctgccgctgttcccgtccc 1742
>gb|AC007444.1|AC007444 Homo sapiens clone RP11-340F1 from 7p14-15, complete sequence Length = 156940 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 56 cttctcccccctccatcctccctccgtcct 85 ||||||| ||||||||||||||||| |||| Sbjct: 141870 cttctcctccctccatcctccctccctcct 141841
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 ctgcccccgtccccgctccgcctgcc 254 ||||||| |||||||||||||||||| Sbjct: 244213 ctgccccagtccccgctccgcctgcc 244238
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 ctgcccccgtccccgctccgcctgcc 254 ||||||| |||||||||||||||||| Sbjct: 244212 ctgccccagtccccgctccgcctgcc 244237
>emb|X69723.1|HSTPI1G H.sapiens TPI1 gene for triosephosphate isomerase Length = 5005 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 cctccccctcctcgccggcgtc 293 |||||||||||||||||||||| Sbjct: 1160 cctccccctcctcgccggcgtc 1181
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 ctgcccccgtccccgctccgcctgcc 254 ||||||| |||||||||||||||||| Sbjct: 256848 ctgccccagtccccgctccgcctgcc 256873
>ref|XM_482659.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caccgcctccccctccgcgcg 354 ||||||||||||||||||||| Sbjct: 139 caccgcctccccctccgcgcg 159
>ref|XM_482658.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2814 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caccgcctccccctccgcgcg 354 ||||||||||||||||||||| Sbjct: 140 caccgcctccccctccgcgcg 160
>ref|NM_197408.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0028C01.39), mRNA Length = 561 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgctccgc 249 ||||||||||||| |||||||||| |||| Sbjct: 402 tgccgccgctgccgccgtccccgcgccgc 374
>ref|NM_189359.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 558 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ctccccctcctcgccggcgtc 293 ||||||||||||||||||||| Sbjct: 444 ctccccctcctcgccggcgtc 424
>gb|AC151537.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0087D01, complete sequence Length = 83225 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 27769 ccgctgccgccgtccccgctccgcc 27793
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 106668 ccgctgccgccgtccccgctccgcc 106692
>ref|XM_364831.1| Magnaporthe grisea 70-15 hypothetical protein (MG09676.4) partial mRNA Length = 2313 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 caacctgctcgacctggccgaggag 219 ||||||| ||||||||||||||||| Sbjct: 1260 caacctgttcgacctggccgaggag 1284
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 7633603 ccgctgccaccgtccccgctccgcc 7633579
>emb|AL591386.19| Human DNA sequence from clone RP11-349K21 on chromosome 9, complete sequence Length = 69657 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 tccccgtcccagcccggcccgccgc 316 |||||| |||||||||||||||||| Sbjct: 8040 tccccggcccagcccggcccgccgc 8064
>ref|XM_780615.1| PREDICTED: Strongylocentrotus purpuratus similar to protein kinase Bsk146 (LOC580563), mRNA Length = 1170 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 gccgccgctgcccccgtccccgctc 246 ||||| ||||||||||||||||||| Sbjct: 947 gccgctgctgcccccgtccccgctc 923
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 acaacctgctcgacctggccg 214 ||||||||||||||||||||| Sbjct: 3921722 acaacctgctcgacctggccg 3921742
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 94 tccgcgagccacttcatgcgccattatcc 122 |||||| |||||||| ||||||||||||| Sbjct: 1694196 tccgcgtgccacttcctgcgccattatcc 1694168
>gb|AC156023.2| Mus musculus BAC clone RP23-210I15 from chromosome 16, complete sequence Length = 196765 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 tcttctcccccctccatcctccctc 79 ||||||||||||||| ||||||||| Sbjct: 46129 tcttctcccccctccctcctccctc 46105
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgctccgc 249 ||||||||||||| |||||||||| |||| Sbjct: 77936 tgccgccgctgccgccgtccccgcgccgc 77908
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 81687 ccgctgccaccgtccccgctccgcc 81711
>gb|AF396866.1|AF396866 Bacteriophage Mx8, complete genome Length = 49534 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 ccgtcccagcccggcccgccgcggcgggt 323 |||||||||||||||| || ||||||||| Sbjct: 12595 ccgtcccagcccggccagcggcggcgggt 12567
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccctcctcgccggcgtccccg 297 ||||||||||||||||||||| Sbjct: 19455336 ccctcctcgccggcgtccccg 19455316 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgctccgc 249 ||||||||||||| |||||||||| |||| Sbjct: 12051030 tgccgccgctgccgccgtccccgcgccgc 12051002
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 221 tgccgccgctgcccccgtccccgctccgc 249 ||||||||||||| |||||||||| |||| Sbjct: 19699576 tgccgccgctgccgccgtccccgcgccgc 19699604
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caccgcctccccctccgcgcg 354 ||||||||||||||||||||| Sbjct: 21715164 caccgcctccccctccgcgcg 21715184 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 22773723 ccctcctcgccggcctccccgtcc 22773700
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ggccggcgcctccccctcctcgccg 288 ||||||| ||||||||||||||||| Sbjct: 25913320 ggccggcccctccccctcctcgccg 25913296 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cctccccctcctcgccggcg 291 |||||||||||||||||||| Sbjct: 11322360 cctccccctcctcgccggcg 11322379 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 267 cggcgcctccccctcctcgccggcgtcc 294 ||||||| || ||||||||||||||||| Sbjct: 7641605 cggcgccgccgcctcctcgccggcgtcc 7641632
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 7631438 ccgctgccaccgtccccgctccgcc 7631414
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctccccctcctcgccggcgtc 293 ||||||||||||||||||||| Sbjct: 42364911 ctccccctcctcgccggcgtc 42364931
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctccccctcctcgccggcgtc 293 ||||||||||||||||||||| Sbjct: 136868 ctccccctcctcgccggcgtc 136888
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctccccctcctcgccggcgtc 293 ||||||||||||||||||||| Sbjct: 24249 ctccccctcctcgccggcgtc 24269
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 37817 ccgctgccgccgtccccgctccgcc 37793
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 ccgctgcccccgtccccgctccgcc 250 |||||||| |||||||||||||||| Sbjct: 111430 ccgctgccgccgtccccgctccgcc 111406
>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017B12 Length = 157424 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ggccggcgcctccccctcctcgccg 288 ||||||| ||||||||||||||||| Sbjct: 68418 ggccggcccctccccctcctcgccg 68394
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caccgcctccccctccgcgcg 354 ||||||||||||||||||||| Sbjct: 82734 caccgcctccccctccgcgcg 82754
>dbj|AK109708.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-G09, full insert sequence Length = 2224 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caccgcctccccctccgcgcg 354 ||||||||||||||||||||| Sbjct: 139 caccgcctccccctccgcgcg 159
>dbj|AK101919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071J10, full insert sequence Length = 2571 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ggccggcgcctccccctcctcgccg 288 ||||||| ||||||||||||||||| Sbjct: 262 ggccggcccctccccctcctcgccg 238
>dbj|AK101292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G18, full insert sequence Length = 2610 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 264 ggccggcgcctccccctcctcgccg 288 ||||||| ||||||||||||||||| Sbjct: 295 ggccggcccctccccctcctcgccg 271
>dbj|AK072132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124K21, full insert sequence Length = 2812 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 caccgcctccccctccgcgcg 354 ||||||||||||||||||||| Sbjct: 140 caccgcctccccctccgcgcg 160
>gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome 9, complete sequence Length = 192639 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 ctcccccctccatcctccctc 79 ||||||||||||||||||||| Sbjct: 124699 ctcccccctccatcctccctc 124719
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 ctggccgaggaggtgccgccgctgc 232 |||||||||| |||||||||||||| Sbjct: 1907340 ctggccgaggtggtgccgccgctgc 1907364
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 221 tgccgccgctgcccccgtccccgctccgc 249 ||||||||||||| |||||||||| |||| Sbjct: 19710852 tgccgccgctgccgccgtccccgcgccgc 19710880
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccctcctcgccggcgtccccg 297 ||||||||||||||||||||| Sbjct: 19381563 ccctcctcgccggcgtccccg 19381543 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 221 tgccgccgctgcccccgtccccgctccgc 249 ||||||||||||| |||||||||| |||| Sbjct: 11926173 tgccgccgctgccgccgtccccgcgccgc 11926201
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 ccctcctcgccggcgtccccg 297 ||||||||||||||||||||| Sbjct: 133030 ccctcctcgccggcgtccccg 133010
>gb|AC000387.1|AC000387 Genomic sequence from Human 9q34, complete sequence Length = 39261 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 tccccgtcccagcccggcccgccgc 316 |||||| |||||||||||||||||| Sbjct: 4030 tccccggcccagcccggcccgccgc 4054
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ccctccatcctccctccgtcctccc 88 |||||| |||||||||||||||||| Sbjct: 1988311 ccctccgtcctccctccgtcctccc 1988287
>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence Length = 193235 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 ctcccccctccatcctccctc 79 ||||||||||||||||||||| Sbjct: 46679 ctcccccctccatcctccctc 46699
>ref|XM_482823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1296 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 194 ccctcctcgccggcctccccgtcc 217
>ref|XM_507261.1| PREDICTED Oryza sativa (japonica cultivar-group), B1111C03.37 mRNA Length = 1462 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 303 ccctcctcgccggcctccccgtcc 326
>ref|XM_468483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cctccccctcctcgccggcg 291 |||||||||||||||||||| Sbjct: 1131 cctccccctcctcgccggcg 1150
>ref|XM_465003.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cctcgccggcgtccccgtcc 300 |||||||||||||||||||| Sbjct: 603 cctcgccggcgtccccgtcc 622
>ref|NM_003936.3| Homo sapiens cyclin-dependent kinase 5, regulatory subunit 2 (p39) (CDK5R2), mRNA Length = 2495 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 658 cggctcgccgcggcgggtcatcgt 681
>ref|XM_516099.1| PREDICTED: Pan troglodytes similar to Cyclin-dependent kinase 5 activator 2 precursor (CDK5 activator 2) (Cyclin-dependent kinase 5 regulatory subunit 2) (P39) (P39I) (LOC459953), mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 861 cggctcgccgcggcgggtcatcgt 884
>gb|AC168049.2| Mus musculus BAC clone RP23-246L6 from chromosome 10, complete sequence Length = 229657 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tcccccctccatcctccctc 79 |||||||||||||||||||| Sbjct: 147124 tcccccctccatcctccctc 147105
>ref|XM_584418.2| PREDICTED: Bos taurus similar to T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F) (LOC539041), mRNA Length = 855 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 222 gccgccgctgcccccgtccccgctccgcctgc 253 |||||||||||||||| ||||||| |||||| Sbjct: 732 gccgccgctgcccccggacccgctctgcctgc 763
>ref|XM_980554.1| PREDICTED: Mus musculus triple functional domain (PTPRF interacting) (Trio), mRNA Length = 11491 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 7279 tgccgccgctgcccccgcccccgc 7256
>ref|XM_908972.2| PREDICTED: Mus musculus triple functional domain (PTPRF interacting), transcript variant 5 (Trio), mRNA Length = 11326 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 7114 tgccgccgctgcccccgcccccgc 7091
>ref|XM_898027.2| PREDICTED: Mus musculus triple functional domain (PTPRF interacting), transcript variant 3 (Trio), mRNA Length = 6504 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 2292 tgccgccgctgcccccgcccccgc 2269
>ref|XM_888341.2| PREDICTED: Mus musculus triple functional domain (PTPRF interacting), transcript variant 1 (Trio), mRNA Length = 11495 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 7283 tgccgccgctgcccccgcccccgc 7260
>gb|AF370426.1| Homo sapiens PP6569 mRNA, complete cds Length = 2597 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tccccgtccaggagcactgg 139 |||||||||||||||||||| Sbjct: 221 tccccgtccaggagcactgg 202
>ref|XM_751620.1| Ustilago maydis 521 hypothetical protein (UM00566.1) partial mRNA Length = 8562 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tcatcgtctcgcaccgcctc 342 |||||||||||||||||||| Sbjct: 6710 tcatcgtctcgcaccgcctc 6691
>gb|AC130219.3| Mus musculus BAC clone RP23-126O16 from chromosome 15, complete sequence Length = 224179 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 171906 tgccgccgctgcccccgcccccgc 171883
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 acaggcaatagacgatgccg 180 |||||||||||||||||||| Sbjct: 125617 acaggcaatagacgatgccg 125636
>emb|CR925759.7| Wallaby DNA sequence from clone MEKBa-346C2, complete sequence Length = 146757 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 ccctccatcctccctccgtcctcc 87 ||||||||||||||||| |||||| Sbjct: 105696 ccctccatcctccctccttcctcc 105673
>gb|BC005843.2| Homo sapiens SH3-domain GRB2-like endophilin B2, mRNA (cDNA clone IMAGE:2821405), partial cds Length = 2485 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tccccgtccaggagcactgg 139 |||||||||||||||||||| Sbjct: 280 tccccgtccaggagcactgg 261
>gb|BC032828.1| Homo sapiens secreted frizzled-related protein 4, mRNA (cDNA clone MGC:26498 IMAGE:4828181), complete cds Length = 2122 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ccggaccccgcggccccgtt 377 |||||||||||||||||||| Sbjct: 221 ccggaccccgcggccccgtt 240
>emb|AL592211.27| Human DNA sequence from clone RP11-167N5 on chromosome 9 Contains the 3' end of the NUP188 gene for nucleoporin 188kDa, the SH3GLB2 gene for SH3-domain GRB2-like endophilin B2, the C9orf54 gene for chromosome 9 open reading frame 54, the DOLPP1 gene for dolichyl pyrophosphate phosphatase 1 and three CpG islands, complete sequence Length = 100262 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 tccccgtccaggagcactgg 139 |||||||||||||||||||| Sbjct: 17114 tccccgtccaggagcactgg 17133
>emb|AL049629.28|HSJ541C22 Human DNA sequence from clone RP4-541C22 on chromosome 11p13, complete sequence Length = 129298 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 ctccatcctccctccgtcct 85 |||||||||||||||||||| Sbjct: 46679 ctccatcctccctccgtcct 46698
>emb|BX321864.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 9/10 Length = 326050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ccccgtcccagcccggcccg 312 |||||||||||||||||||| Sbjct: 94907 ccccgtcccagcccggcccg 94926
>gb|BC041771.1| Homo sapiens cyclin-dependent kinase 5, regulatory subunit 2 (p39), mRNA (cDNA clone MGC:26409 IMAGE:4818320), complete cds Length = 2516 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 679 cggctcgccgcggcgggtcatcgt 702
>emb|AJ576039.1|GWE576039 Gordonia westfalica strain DSM44215T plasmid pKB1 complete genome Length = 101016 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 ccacaacctgctcgacctggccga 215 |||||||||||||||||| ||||| Sbjct: 63005 ccacaacctgctcgacctcgccga 63028
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 cgacctggccgaggaggtgc 223 |||||||||||||||||||| Sbjct: 6517894 cgacctggccgaggaggtgc 6517913
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 ccgccgatccagctcaccat 55 |||||||||||||||||||| Sbjct: 2871365 ccgccgatccagctcaccat 2871384
>gb|BC060724.1| Mus musculus triple functional domain (PTPRF interacting), mRNA (cDNA clone IMAGE:6406413), partial cds Length = 5267 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 3499 tgccgccgctgcccccgcccccgc 3476
>gb|BC051169.1| Mus musculus triple functional domain (PTPRF interacting), mRNA (cDNA clone IMAGE:6306998), partial cds Length = 4988 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 750 tgccgccgctgcccccgcccccgc 727
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 gccgccgctgcccccgtccccgctccgc 249 ||||||||| || ||||||||||||||| Sbjct: 3736471 gccgccgctcccgccgtccccgctccgc 3736444
>gb|AC161476.3| Pan troglodytes BAC clone CH251-284F7 from chromosome unknown, complete sequence Length = 153003 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tccccgtccaggagcactgg 139 |||||||||||||||||||| Sbjct: 109404 tccccgtccaggagcactgg 109385
>gb|AC120373.10| Mus musculus chromosome 15, clone RP24-512O2, complete sequence Length = 159741 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 tgccgccgctgcccccgtccccgc 244 ||||||||||||||||| |||||| Sbjct: 5810 tgccgccgctgcccccgcccccgc 5787
>gb|AC097468.3| Homo sapiens BAC clone RP11-33O4 from 2, complete sequence Length = 169741 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 39971 cggctcgccgcggcgggtcatcgt 39994
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 cctccccctcctcgccggcg 291 |||||||||||||||||||| Sbjct: 10069 cctccccctcctcgccggcg 10088
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 267 cggcgcctccccctcctcgccggcgtcc 294 ||||||| || ||||||||||||||||| Sbjct: 64860 cggcgccgccgcctcctcgccggcgtcc 64887
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 gccgccgctgcccccgtccccgctccgc 249 ||||||||| || ||||||||||||||| Sbjct: 144732 gccgccgctcccgccgtccccgctccgc 144705
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 cctccccctcctcgccggcg 291 |||||||||||||||||||| Sbjct: 73678 cctccccctcctcgccggcg 73659
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 gccgccgctgcccccgtccccgctccgc 249 ||||||||| || ||||||||||||||| Sbjct: 43773 gccgccgctcccgccgtccccgctccgc 43746
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cctcgccggcgtccccgtcc 300 |||||||||||||||||||| Sbjct: 71917 cctcgccggcgtccccgtcc 71898
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 100365 ccctcctcgccggcctccccgtcc 100342
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 142517 ccctcctcgccggcctccccgtcc 142494
>dbj|AK111681.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160E04, full insert sequence Length = 802 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 267 cggcgcctccccctcctcgccggcgtcc 294 ||||||| || ||||||||||||||||| Sbjct: 323 cggcgccgccgcctcctcgccggcgtcc 350
>dbj|AK107019.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H06, full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cctcgccggcgtccccgtcc 300 |||||||||||||||||||| Sbjct: 603 cctcgccggcgtccccgtcc 622
>dbj|AK102612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099D06, full insert sequence Length = 1296 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 194 ccctcctcgccggcctccccgtcc 217
>emb|AJ330131.1|HSA330131 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XA14C Length = 612 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 87 cggctcgccgcggcgggtcatcgt 110
>dbj|AK059195.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A01, full insert sequence Length = 1462 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ccctcctcgccggcgtccccgtcc 300 |||||||||||||| ||||||||| Sbjct: 303 ccctcctcgccggcctccccgtcc 326
>emb|AL935159.11| Mouse DNA sequence from clone RP23-232L15 on chromosome 2, complete sequence Length = 126154 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cccccctccatcctccctcc 80 |||||||||||||||||||| Sbjct: 98059 cccccctccatcctccctcc 98040
>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence Length = 247228 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tcccccctccatcctccctc 79 |||||||||||||||||||| Sbjct: 59801 tcccccctccatcctccctc 59782
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 cgacgcgggcaccgtcgcctacca 419 |||||||| ||||||||||||||| Sbjct: 2103584 cgacgcggtcaccgtcgcctacca 2103607 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 acaggcaatagacgatgccg 180 |||||||||||||||||||| Sbjct: 499358 acaggcaatagacgatgccg 499339
>gb|U34051.1|HSU34051 Human cyclin-dependent kinase 5 activator isoform p39i mRNA, complete cds Length = 1186 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 582 cggctcgccgcggcgggtcatcgt 605
>gb|AC156495.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0005D12, complete sequence Length = 88500 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 gccgccgctgcccccgtccccgctccgc 249 |||||||||||||||| | ||||||||| Sbjct: 50806 gccgccgctgcccccgccaccgctccgc 50833
>gb|AC151998.6| Mus musculus BAC clone RP23-98L16 from chromosome 8, complete sequence Length = 219376 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ttctcccccctccatcctccctcc 80 ||||||||||||| |||||||||| Sbjct: 93076 ttctcccccctccctcctccctcc 93053
>gb|DQ307839.1| Homo sapiens cyclin-dependent kinase 5, regulatory subunit 2 (p39) (CDK5R2) gene, complete cds Length = 6091 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 cggcccgccgcggcgggtcatcgt 329 |||| ||||||||||||||||||| Sbjct: 2515 cggctcgccgcggcgggtcatcgt 2538
>emb|AL832592.1|HSM803901 Homo sapiens mRNA; cDNA DKFZp451L0716 (from clone DKFZp451L0716) Length = 4823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tccccgtccaggagcactgg 139 |||||||||||||||||||| Sbjct: 2579 tccccgtccaggagcactgg 2560 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,297,897 Number of Sequences: 3902068 Number of extensions: 3297897 Number of successful extensions: 83946 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81888 Number of HSP's gapped (non-prelim): 2058 length of query: 461 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 439 effective length of database: 17,147,199,772 effective search space: 7527620699908 effective search space used: 7527620699908 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
