>COPB2_MOUSE (O55029) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +2

Query: 197 MPLRLEIKRKFAQRSERVKSVDLHPT 274
           MPLRL+IKRK   RS+RVKSVDLHPT
Sbjct: 1   MPLRLDIKRKLTARSDRVKSVDLHPT 26

>COPB2_HUMAN (P35606) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +2

Query: 200 PLRLEIKRKFAQRSERVKSVDLHPT 274
           PLRL+IKRK   RS+RVKSVDLHPT
Sbjct: 1   PLRLDIKRKLTARSDRVKSVDLHPT 25

>COPB2_BOVIN (P35605) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 905

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +2

Query: 200 PLRLEIKRKFAQRSERVKSVDLHPT 274
           PLRL+IKRK   RS+RVKSVDLHPT
Sbjct: 1   PLRLDIKRKLTARSDRVKSVDLHPT 25

>COPB2_RAT (O35142) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
           (p102)
          Length = 904

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 200 PLRLEIKRKFAQRSERVKSVDLHPT 274
           PLRL+IKRK    S+RVKSVDLHPT
Sbjct: 1   PLRLDIKRKLTAMSDRVKSVDLHPT 25

>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)|
           (Beta'-COP)
          Length = 1000

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 197 MPLRLEIKRKFAQRSERVKSVDLHP 271
           MPLRL++KRK   RS+RVK VDLHP
Sbjct: 1   MPLRLDVKRKLLARSDRVKCVDLHP 25

>COPB2_DROME (O62621) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
          Length = 914

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +2

Query: 197 MPLRLEIKRKFAQRSERVKSVDLHP 271
           MPL+L+IKR+   RS+RVK VDLHP
Sbjct: 1   MPLKLDIKRRLTSRSDRVKCVDLHP 25

>COPB2_YEAST (P41811) Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP)|
          Length = 889

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +2

Query: 203 LRLEIKRKFAQRSERVKSVDLHPT 274
           ++L+IK+ F+ RS+RVK +D HPT
Sbjct: 1   MKLDIKKTFSNRSDRVKGIDFHPT 24

>COPB2_SCHPO (O42937) Probable coatomer subunit beta' (Beta'-coat protein)|
           (Beta'-COP)
          Length = 796

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 203 LRLEIKRKFAQRSERVKSVDLHPT 274
           +RL+ +RK    +ERVK+VD HPT
Sbjct: 2   MRLDFQRKLLSHTERVKAVDFHPT 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.304    0.123    0.338 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,723,451
Number of Sequences: 219361
Number of extensions: 67739
Number of successful extensions: 90
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)