ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA 133 4e-28
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
3dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
4dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
5dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
6dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
8dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
9gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 100 5e-18
10ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) tr... 62 1e-06
11ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91)... 62 1e-06
12gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, co... 62 1e-06
13gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19... 62 1e-06
14gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, co... 62 1e-06
15gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 62 1e-06
16emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein 50 0.004
17ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 tran... 46 0.069
18ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 tran... 46 0.069
19gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence 46 0.069
20gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein ... 46 0.069
21emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.27
22ref|XM_545469.2| PREDICTED: Canis familiaris similar to Triparti... 42 1.1
23emb|AL049859.7|HSJ826A18 Human DNA sequence from clone RP5-826A1... 42 1.1
24gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 ma... 40 4.2
25gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome... 40 4.2
26emb|BX030885.1|CNS08VZT Single read from an extremity of a full-... 40 4.2
27emb|BX030884.1|CNS08VZS Single read from an extremity of a full-... 40 4.2
28gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, R... 40 4.2
29emb|BX572083.6| Zebrafish DNA sequence from clone DKEY-232J4 in ... 40 4.2
30gb|AC117392.4| Homo sapiens 3 BAC RP11-6F2 (Roswell Park Cancer ... 40 4.2
31dbj|AK125374.1| Homo sapiens cDNA FLJ43384 fis, clone OCBBF20061... 40 4.2
32gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, compl... 40 4.2
33gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, comple... 40 4.2
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.2
35emb|AJ249358.1|GAS249358 Grapevine asteroid mosaic-associated vi... 40 4.2
36ref|XM_312964.2| Anopheles gambiae str. PEST ENSANGP00000020352 ... 40 4.2
37emb|AL049840.8|CNS0000K Human chromosome 14 DNA sequence BAC R-7... 40 4.2
38gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosom... 40 4.2
39dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic ... 40 4.2 
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3139

 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 183 agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
           ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 213 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 272

                                                                       
Query: 243 agcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
           |||  || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 273 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 332

                              
Query: 303 gctttggcgacaagcagcg 321
           |||| ||||||||||||||
Sbjct: 333 gcttcggcgacaagcagcg 351
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                           
Query: 183     agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
               ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 4253482 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 4253541

                                                                           
Query: 243     agcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
               |||  || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 4253542 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 4253601

                                  
Query: 303     gctttggcgacaagcagcg 321
               |||| ||||||||||||||
Sbjct: 4253602 gcttcggcgacaagcagcg 4253620
to top
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                         
Query: 183   agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
             ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 91449 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 91508

                                                                         
Query: 243   agcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
             |||  || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 91509 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 91568

                                
Query: 303   gctttggcgacaagcagcg 321
             |||| ||||||||||||||
Sbjct: 91569 gcttcggcgacaagcagcg 91587
to top
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0666G04
          Length = 141983

 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                         
Query: 183   agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
             ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 33252 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 33311

                                                                         
Query: 243   agcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
             |||  || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 33312 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 33371

                                
Query: 303   gctttggcgacaagcagcg 321
             |||| ||||||||||||||
Sbjct: 33372 gcttcggcgacaagcagcg 33390
to top
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full
           insert sequence
          Length = 3139

 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 183 agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
           ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 213 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 272

                                                                       
Query: 243 agcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
           |||  || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 273 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 332

                              
Query: 303 gctttggcgacaagcagcg 321
           |||| ||||||||||||||
Sbjct: 333 gcttcggcgacaagcagcg 351
to top
>dbj|AK059244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G02, full
           insert sequence
          Length = 1164

 Score =  133 bits (67), Expect = 4e-28
 Identities = 121/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 183 agatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggc 242
           ||||||| |||||||| |||||||| || |||||||||||||||||||  || || ||||
Sbjct: 159 agatgagcgtggtgggctttgatctagggaatgagagctgcattgtggccgtcgcgcggc 218

                                                                       
Query: 243 agcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtct 302
           |||  || || || ||||||||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 219 agcgcggcattgatgtggtcctcaacgaggagtcgaagcgggagactccggctattgtct 278

                              
Query: 303 gctttggcgacaagcagcg 321
           |||| ||||||||||||||
Sbjct: 279 gcttcggcgacaagcagcg 297
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 116/138 (84%)
 Strand = Plus / Plus

                                                                           
Query: 184     gatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggca 243
               |||||| ||||||||||| ||  | |||||||||||| |||| || |  ||||| |||||
Sbjct: 4820085 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 4820144

                                                                           
Query: 244     gcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctg 303
               ||  || ||||||||||| ||||| |||||||| ||||||||||| |||||  | |||||
Sbjct: 4820145 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 4820204

                                 
Query: 304     ctttggcgacaagcagcg 321
               ||| ||||||||||||||
Sbjct: 4820205 cttcggcgacaagcagcg 4820222
to top
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full
           insert sequence
          Length = 3137

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 116/138 (84%)
 Strand = Plus / Plus

                                                                       
Query: 184 gatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggca 243
           |||||| ||||||||||| ||  | |||||||||||| |||| || |  ||||| |||||
Sbjct: 183 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 242

                                                                       
Query: 244 gcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctg 303
           ||  || ||||||||||| ||||| |||||||| ||||||||||| |||||  | |||||
Sbjct: 243 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 302

                             
Query: 304 ctttggcgacaagcagcg 321
           ||| ||||||||||||||
Sbjct: 303 cttcggcgacaagcagcg 320
to top
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 116/138 (84%)
 Strand = Plus / Plus

                                                                         
Query: 184   gatgagtgtggtggggtttgatctgggcaatgagagctgcattgtgggggtggcccggca 243
             |||||| ||||||||||| ||  | |||||||||||| |||| || |  ||||| |||||
Sbjct: 92493 gatgagcgtggtggggttcgacgtcggcaatgagagcggcatcgtcgccgtggcgcggca 92552

                                                                         
Query: 244   gcctggaatcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctg 303
             ||  || ||||||||||| ||||| |||||||| ||||||||||| |||||  | |||||
Sbjct: 92553 gcggggcatcgacgtggtgctcaacgaggagtcgaagcgggagacccccgccgtcgtctg 92612

                               
Query: 304   ctttggcgacaagcagcg 321
             ||| ||||||||||||||
Sbjct: 92613 cttcggcgacaagcagcg 92630
to top
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
           AT1G79930.1 mRNA, complete cds
          Length = 2949

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 217 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 276

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 277 gacaagcagcg 287
to top
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant
           AT1G79930.2 mRNA, complete cds
          Length = 3012

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 261 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 320

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 321 gacaagcagcg 331
to top
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds
          Length = 2798

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 217 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 276

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 277 gacaagcagcg 287
to top
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete
             sequence
          Length = 111301

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 251   atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
             |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 37179 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 37238

                        
Query: 311   gacaagcagcg 321
             |||||||||||
Sbjct: 37239 gacaagcagcg 37249



 Score = 46.1 bits (23), Expect = 0.069
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 251   atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
             |||||||| || || ||||| ||||| || || ||||| || ||||| || |||||||| 
Sbjct: 42022 atcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgctttggt 42081

                        
Query: 311   gacaagcagcg 321
             |||||||||||
Sbjct: 42082 gacaagcagcg 42092
to top
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds
          Length = 2496

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 67  atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 126

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 127 gacaagcagcg 137
to top
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence,
            complete sequence
          Length = 116905

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 251  atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
            |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 3765 atcgacgtcgtgcttaatgatgagtccaatcgtgagactcctgctattgtctgcttcggt 3706

                       
Query: 311  gacaagcagcg 321
            |||||||||||
Sbjct: 3705 gacaagcagcg 3695
to top
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein
          Length = 2923

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| |||||||| || ||||| || |||||||||||||| || 
Sbjct: 220 atcgacgtcgtgcttaatgatgagtccaatcgtgagacgcctgctattgtctgcttcggt 279

                
Query: 311 gacaa 315
           |||||
Sbjct: 280 gacaa 284
to top
>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
           AT1G79920.1 mRNA, complete cds
          Length = 2941

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| ||||| || || ||||| || ||||| || |||||||| 
Sbjct: 210 atcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgctttggt 269

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 270 gacaagcagcg 280
to top
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant
           AT1G79920.2 mRNA, complete cds
          Length = 2941

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| ||||| || || ||||| || ||||| || |||||||| 
Sbjct: 210 atcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgctttggt 269

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 270 gacaagcagcg 280
to top
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence
          Length = 2952

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| ||||| || || ||||| || ||||| || |||||||| 
Sbjct: 203 atcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgctttggt 262

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 263 gacaagcagcg 273
to top
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920;
           F19K16.12) mRNA, complete cds
          Length = 2850

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 251 atcgacgtggtcctcaatgaggagtccaagcgggagacacccgctattgtctgctttggc 310
           |||||||| || || ||||| ||||| || || ||||| || ||||| || |||||||| 
Sbjct: 210 atcgacgtcgtgcttaatgatgagtcaaatcgcgagactccggctatcgtttgctttggt 269

                      
Query: 311 gacaagcagcg 321
           |||||||||||
Sbjct: 270 gacaagcagcg 280
to top
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 89     ctctggcaccggcaacggcctcctca 114
              ||||||| ||||||||||||||||||
Sbjct: 256544 ctctggctccggcaacggcctcctca 256569
to top
>ref|XM_545469.2| PREDICTED: Canis familiaris similar to Tripartite motif protein 26
            (Zinc finger protein 173) (Acid finger protein) (AFP)
            (RING finger protein 95) (LOC488347), mRNA
          Length = 1530

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 214  tgagagctgcattgtgggggtggcc 238
            |||||||||||| ||||||||||||
Sbjct: 1212 tgagagctgcatggtgggggtggcc 1236
to top
>emb|AL049859.7|HSJ826A18 Human DNA sequence from clone RP5-826A18 on chromosome Xq23, complete
             sequence
          Length = 77913

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   tggggtttgatctgggcaatg 215
             |||||||||||||||||||||
Sbjct: 52761 tggggtttgatctgggcaatg 52781
to top
>gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 map 1, complete sequence
          Length = 191415

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    gcctcatcagctgcggcggctacc 66
             ||||||||||||||||| ||||||
Sbjct: 49794 gcctcatcagctgcggctgctacc 49817
to top
>gb|AC163613.5| Mus musculus BAC clone RP24-150N2 from chromosome 1, complete
           sequence
          Length = 135256

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 43  gcctcatcagctgcggcggctacc 66
           ||||||||||||||||| ||||||
Sbjct: 676 gcctcatcagctgcggctgctacc 653
to top
>emb|BX030885.1|CNS08VZT Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA46AD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 945

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 246 ctggaatcgacgtggtcctcaatg 269
           |||||||||| |||||||||||||
Sbjct: 453 ctggaatcgatgtggtcctcaatg 430
to top
>emb|BX030884.1|CNS08VZS Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA46AD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 993

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 246 ctggaatcgacgtggtcctcaatg 269
           |||||||||| |||||||||||||
Sbjct: 631 ctggaatcgatgtggtcctcaatg 654
to top
>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete
              Sequence, complete sequence
          Length = 195048

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     agaagcaaagctccagaagc 86
              ||||||||||||||||||||
Sbjct: 187805 agaagcaaagctccagaagc 187824
to top
>emb|BX572083.6| Zebrafish DNA sequence from clone DKEY-232J4 in linkage group 13,
             complete sequence
          Length = 99030

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ttgatctgggcaatgagagc 220
             ||||||||||||||||||||
Sbjct: 68027 ttgatctgggcaatgagagc 68008
to top
>gb|AC117392.4| Homo sapiens 3 BAC RP11-6F2 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 147520

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gacaccagcctcatcagctg 55
            ||||||||||||||||||||
Sbjct: 6708 gacaccagcctcatcagctg 6689
to top
>dbj|AK125374.1| Homo sapiens cDNA FLJ43384 fis, clone OCBBF2006148, moderately
           similar to P53-BINDING PROTEIN 2
          Length = 3137

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  gaagcttctctggcaccggc 101
           ||||||||||||||||||||
Sbjct: 88  gaagcttctctggcaccggc 69
to top
>gb|AC025475.5| Homo sapiens chromosome 5 clone RP11-351N6, complete sequence
          Length = 186462

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   gctgctgccaagacaccagc 44
            ||||||||||||||||||||
Sbjct: 9060 gctgctgccaagacaccagc 9041
to top
>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence
          Length = 156789

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     gctgctgccaagacaccagc 44
              ||||||||||||||||||||
Sbjct: 148737 gctgctgccaagacaccagc 148718
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 103     acggcctcctcaccgcgggtgtag 126
               |||||||||||||||| |||||||
Sbjct: 3985224 acggcctcctcaccgccggtgtag 3985247
to top
>emb|AJ249358.1|GAS249358 Grapevine asteroid mosaic-associated virus partial mRNA for
           methyltransferase domain
          Length = 575

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 aggagtccaagcgggagaca 289
           ||||||||||||||||||||
Sbjct: 298 aggagtccaagcgggagaca 279
to top
>ref|XM_312964.2| Anopheles gambiae str. PEST ENSANGP00000020352
           (ENSANGG00000017863), partial mRNA
          Length = 6030

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 246 ctggaatcgacgtggtcctcaatg 269
           |||||||||| |||||||||||||
Sbjct: 484 ctggaatcgatgtggtcctcaatg 507
to top
>emb|AL049840.8|CNS0000K Human chromosome 14 DNA sequence BAC R-73M18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165617

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     gaagcttctctggcaccggc 101
              ||||||||||||||||||||
Sbjct: 109196 gaagcttctctggcaccggc 109177
to top
>gb|AC138622.4| Mus musculus BAC clone RP23-100J15 from chromosome 6, complete sequence
          Length = 194611

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    agaagcaaagctccagaagc 86
             ||||||||||||||||||||
Sbjct: 49613 agaagcaaagctccagaagc 49632
to top
>dbj|AB070950.1| Streptomyces avermitilis peptide-1 biosynthetic gene cluster
          Length = 21391

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   acggcctcctcaccgcgggtgtag 126
             |||||||||||||||| |||||||
Sbjct: 10968 acggcctcctcaccgccggtgtag 10945


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,432,293
Number of Sequences: 3902068
Number of extensions: 2432293
Number of successful extensions: 40823
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40736
Number of HSP's gapped (non-prelim): 87
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top