ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39f09 |
|---|---|
| Clone Library Name | barley_pub |
>XAB2_RAT (Q99PK0) XPA-binding protein 2 (Adapter protein ATH-55)| Length = 855 Score = 92.4 bits (228), Expect = 4e-19 Identities = 45/90 (50%), Positives = 58/90 (64%) Frame = +3 Query: 156 PDLYPTEDDLPYEEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWH 335 PDL E+DLPYEEEI+R F +K W RY+ + AP + +YERALK LP SYKLW+ Sbjct: 13 PDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWY 72 Query: 336 AYLRERLDHVRPHPISHPAYAXLNNTFERA 425 YL+ R V+ ++ PAY +NN ERA Sbjct: 73 RYLKARRAQVKHRCVTDPAYEDVNNCHERA 102
>XAB2_MOUSE (Q9DCD2) XPA-binding protein 2| Length = 855 Score = 92.4 bits (228), Expect = 4e-19 Identities = 45/90 (50%), Positives = 58/90 (64%) Frame = +3 Query: 156 PDLYPTEDDLPYEEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWH 335 PDL E+DLPYEEEI+R F +K W RY+ + AP + +YERALK LP SYKLW+ Sbjct: 13 PDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWY 72 Query: 336 AYLRERLDHVRPHPISHPAYAXLNNTFERA 425 YL+ R V+ ++ PAY +NN ERA Sbjct: 73 RYLKARRAQVKHRCVTDPAYEDVNNCHERA 102
>XAB2_HUMAN (Q9HCS7) XPA-binding protein 2 (HCNP protein)| Length = 855 Score = 92.4 bits (228), Expect = 4e-19 Identities = 45/90 (50%), Positives = 58/90 (64%) Frame = +3 Query: 156 PDLYPTEDDLPYEEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWH 335 PDL E+DLPYEEEI+R F +K W RY+ + AP + +YERALK LP SYKLW+ Sbjct: 13 PDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKLLPCSYKLWY 72 Query: 336 AYLRERLDHVRPHPISHPAYAXLNNTFERA 425 YL+ R V+ ++ PAY +NN ERA Sbjct: 73 RYLKARRAQVKHRCVTDPAYEDVNNCHERA 102
>SYF1_SCHPO (Q9P7R9) Pre-mRNA-splicing factor syf1 (Complexed with cdc5 protein| 3) (Cell cycle control protein cwf3) Length = 790 Score = 81.6 bits (200), Expect = 7e-16 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 2/86 (2%) Frame = +3 Query: 177 DDLPYEEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWHAYLRERL 356 DD P+E E+LR+P+ LK W RY+ + KR +++ERA LPGSYK+W +YL R+ Sbjct: 17 DDEPFELELLRDPYSLKSWLRYIKTHEGSTLEKRVLLFERACSELPGSYKIWKSYLELRV 76 Query: 357 DHVRP-HPISH-PAYAXLNNTFERAL 428 HV +P H A+A +N+ FER+L Sbjct: 77 AHVEHLNPYFHAEAFASVNDCFERSL 102
>SYF1_NEUCR (Q7SAK5) Pre-mRNA-splicing factor syf-1| Length = 829 Score = 63.9 bits (154), Expect = 2e-10 Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 4/95 (4%) Frame = +3 Query: 156 PDL-YPTEDDLPYEEEILREPFKLKGWWRYLVARAS-APFAKRAVIYERALKALPGSYKL 329 PDL +E+D PYE++I+R P K W Y+ + ++A I ERA LP SYKL Sbjct: 12 PDLSLVSEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACVQLPRSYKL 71 Query: 330 WHAYLRERLDHVRP--HPISHPAYAXLNNTFERAL 428 W YLR R HV I Y +N+ FERAL Sbjct: 72 WKMYLRFRTKHVSKLNAAIFASEYQKVNSLFERAL 106
>SYF1_ASPFU (Q4WVF4) Pre-mRNA-splicing factor syf1| Length = 839 Score = 63.9 bits (154), Expect = 2e-10 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 4/95 (4%) Frame = +3 Query: 156 PDLYPTED-DLPYEEEILREPFKLKGWWRYL-VARASAPFAKRAVIYERALKALPGSYKL 329 PDLY D D YE+++ R P +K W Y+ + + ++A + ERA K LP SYKL Sbjct: 9 PDLYLIADQDTVYEQDLFRAPGSIKPWLAYIEYKQQNGTLYEQAFVMERACKQLPRSYKL 68 Query: 330 WHAYLRERLDHVRPHPIS--HPAYAXLNNTFERAL 428 W YL R++H+R + Y +N FERAL Sbjct: 69 WKMYLEFRINHLRGRNATKYRAEYQKVNALFERAL 103
>SYF1_DEBHA (Q6BQ23) Pre-mRNA-splicing factor SYF1| Length = 850 Score = 62.4 bits (150), Expect = 4e-10 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%) Frame = +3 Query: 174 EDDLPYEEEILREPFKLKGWWRYL---VARASAPFAKRAVIYERALKALPGSYKLWHAYL 344 EDD+PYE+E+ + P L W RY + +S F R I ERA+K LP SYKLW Y+ Sbjct: 14 EDDIPYEQEVAKNPNNLSNWLRYYRFKSSTSSCTFQNRVFILERAVKQLPRSYKLWMIYI 73 Query: 345 RERLDHVRPHPISHPAYAXL---NNTFERAL 428 L V+ +S+ + + + N FER+L Sbjct: 74 DVVLQEVQT-SVSYKSKSEILLVNMVFERSL 103
>SYF1_MAGGR (Q52DF3) Pre-mRNA-splicing factor SYF1| Length = 816 Score = 57.8 bits (138), Expect = 1e-08 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = +3 Query: 171 TEDDLPYEEEILREPFKLKGWWRYLVARAS-APFAKRAVIYERALKALPGSYKLWHAYLR 347 T+DD YE++I R P K W Y+ + ++A + ERA LP SYKLW YL Sbjct: 5 TDDDFVYEQDIQRSPGSTKPWLAYISYKIQHGTVEEQAFVLERACMQLPRSYKLWKMYLT 64 Query: 348 ERLDHVRP--HPISHPAYAXLNNTFERAL 428 R H+ I Y +N+ FERAL Sbjct: 65 FRTKHIAKLNAAIFAAEYRKVNSLFERAL 93
>SYF1_ASHGO (Q75EF0) Pre-mRNA-splicing factor SYF1| Length = 803 Score = 52.4 bits (124), Expect = 5e-07 Identities = 24/66 (36%), Positives = 40/66 (60%) Frame = +3 Query: 159 DLYPTEDDLPYEEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWHA 338 D + T +DL +E +L+EP + W RY+ A+ P + +YER L+ALP +++W Sbjct: 2 DEFVTAEDLVHEYSVLQEPDSVVNWSRYIAAKRDDP-CSVSWVYERCLQALPAQWEVWRE 60 Query: 339 YLRERL 356 YL+ R+ Sbjct: 61 YLQFRM 66
>SYF1_EMENI (Q5BH69) Pre-mRNA-splicing factor syf1| Length = 851 Score = 52.0 bits (123), Expect = 6e-07 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 21/112 (18%) Frame = +3 Query: 156 PDLYPTED-DLPYEEEILREPFKLKGWWRYLVARAS------APFAKRAV---------- 284 PDLY D D YE+++LR P +K W Y+ + F R + Sbjct: 9 PDLYLIADNDSVYEQDLLRNPGTIKPWLAYIEYKQQNGTLYEQAFVGRPLDALIISILND 68 Query: 285 --IYERALKALPGSYKLWHAYLRERLDHVR-PHPISHPA-YAXLNNTFERAL 428 + ERA K LP SYKLW YL R H++ + I + A + +N FERAL Sbjct: 69 FQVMERACKQLPRSYKLWKMYLEFRTKHLKNRNAIKYRAEFQKVNTLFERAL 120
>SYF1_YARLI (Q6CAR6) Pre-mRNA-splicing factor SYF1| Length = 736 Score = 44.3 bits (103), Expect = 1e-04 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYL--VARASAPFAKRAVIYERALKALPGSYKLWHAYLRERLDH 362 +E +I P ++ W RY+ V ++ +++ERA+ ALP SYKLW YL R Sbjct: 4 HELDIASSPGDVRPWIRYISSVKNDKTTARQKCILFERAVTALPRSYKLWKEYLDFRSGL 63 Query: 363 VRP-HPISH-PAYAXLNNTFERAL 428 +PI H Y +N +E++L Sbjct: 64 CTGLNPIKHADEYDRVNALYEKSL 87
>SYF1_KLULA (Q6CYA2) Pre-mRNA-splicing factor SYF1| Length = 798 Score = 43.5 bits (101), Expect = 2e-04 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%) Frame = +3 Query: 159 DLYPTEDDLPYEEEILREPFKLKGWWRYLVARASA-PFAKRAVIYERALKALPGSYKLWH 335 D + E+D+P+E ++RE W RYL + SA +YER LK + + LW Sbjct: 4 DKFVKEEDIPFEYGVVRERDNAVSWSRYLATKRSAGDELNLDWLYERCLKEIKDDWHLWK 63 Query: 336 AYLRERLD 359 +L+ R++ Sbjct: 64 EFLKWRIE 71
>SYF1_CRYNE (Q5KH46) Pre-mRNA-splicing factor SYF1| Length = 1031 Score = 42.4 bits (98), Expect = 5e-04 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 29/99 (29%) Frame = +3 Query: 156 PDLYPTEDDLPYEEEILREPFKLKGWWRY----------------------------LVA 251 P L P+ D LP EE++L P L+ W Y L + Sbjct: 27 PHLIPSAD-LPVEEDLLHNPENLRSWLSYIHNVKEKIAADEPAKGGVLSPEEEILGPLAS 85 Query: 252 RASAPFAKRAV-IYERALKALPGSYKLWHAYLRERLDHV 365 + + +R V IYERA+ P SYKLW AY R +V Sbjct: 86 KNARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTRQSYV 124
>CLF1_ASHGO (Q750X3) Pre-mRNA-splicing factor CLF1| Length = 683 Score = 37.4 bits (85), Expect = 0.015 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYL-VARASAPFAKRAVIYERALKALPGSYK---LWHAYL 344 YEE++L P WW YL + S P RA + E +KA+P S + W Y+ Sbjct: 300 YEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALAEATVKAVPRSQEKDMQWRKYV 355 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAPFAKRA-VIYERALKALPGSYKLWHAYL 344 +EE + R ++ W RY +RA ++ERAL PG +W Y+ Sbjct: 49 FEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYV 101
>SYF1_USTMA (Q4P7S1) Pre-mRNA-splicing factor SYF1| Length = 1081 Score = 33.1 bits (74), Expect = 0.29 Identities = 25/96 (26%), Positives = 32/96 (33%), Gaps = 30/96 (31%) Frame = +3 Query: 180 DLPYEEEILREPFKLKGWWRYLVARASAPFAKR--------------------------- 278 D+ E+E+LR P + W Y+ + KR Sbjct: 60 DILLEQELLRNPDNFRSWSSYIDHIINTNVVKRPPPDVSLTTYQAALLGPLASSTQRTAL 119 Query: 279 ---AVIYERALKALPGSYKLWHAYLRERLDHVRPHP 377 IYERAL P Y LW YL+ R V P Sbjct: 120 RRLTSIYERALAQFPTRYSLWRDYLQNRSRFVLGDP 155 Score = 31.2 bits (69), Expect = 1.1 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = +3 Query: 279 AVIYERALKALPGSYKLWHAYLRERLDHVRPHPISHP--AYAXLNNTFERAL 428 A +YERAL LP +LW +YL + HP P ++ TF+RAL Sbjct: 210 AALYERALMWLPTMPRLWLSYLSMFI-----HPQCPPILSFTHARRTFDRAL 256
>CLF1_DEBHA (Q6BSP7) Pre-mRNA-splicing factor CLF1| Length = 714 Score = 32.3 bits (72), Expect = 0.49 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Frame = +3 Query: 183 LPYEEEILREPFKLKGWWRYL-VARASAPFAKRAVIYERALKALP-GSYK--LWHAYL 344 L YEEE+ + P WW Y+ + + +ERA+K +P ++K +W Y+ Sbjct: 322 LKYEEEVNKSPLDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYI 379
>CLF1_NEUCR (Q7SGD2) Pre-mRNA-splicing factor clf-1| Length = 695 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAP-FAKRAVIYERALKALPGSYKLWHAYLRERL 356 +E+ + R +L W +Y FA+ ++ERAL P + +LW Y++ + Sbjct: 61 FEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEI 117
>CSTF3_PONPY (Q5RDW9) Cleavage stimulation factor, 77 kDa subunit (CSTF 77 kDa| subunit) (CF-1 77 kDa subunit) (CstF-77) Length = 717 Score = 31.2 bits (69), Expect = 1.1 Identities = 13/55 (23%), Positives = 23/55 (41%) Frame = +3 Query: 192 EEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWHAYLRERL 356 E+++ P+ L W + + P K YER + P S + W Y+ + Sbjct: 22 EKKLEENPYDLDAWSTLIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEI 76
>CLF1_ASPFU (Q4WT84) Pre-mRNA-splicing factor clf1| Length = 676 Score = 30.8 bits (68), Expect = 1.4 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAPFAKRA-VIYERALKALPGSYKLWHAYLRERL 356 +E+ + R + W RY +RA I+ERAL P S LW Y+ + Sbjct: 61 FEDYVRRNRLNMNNWMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEM 117
>CSTF3_MOUSE (Q99LI7) Cleavage stimulation factor, 77 kDa subunit (CSTF 77 kDa| subunit) (CF-1 77 kDa subunit) (CstF-77) Length = 717 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/55 (23%), Positives = 23/55 (41%) Frame = +3 Query: 192 EEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWHAYLRERL 356 E+++ P+ L W + + P K YER + P S + W Y+ + Sbjct: 22 EKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEI 76
>CSTF3_HUMAN (Q12996) Cleavage stimulation factor, 77 kDa subunit (CSTF 77 kDa| subunit) (CF-1 77 kDa subunit) (CstF-77) Length = 717 Score = 30.4 bits (67), Expect = 1.9 Identities = 13/55 (23%), Positives = 23/55 (41%) Frame = +3 Query: 192 EEEILREPFKLKGWWRYLVARASAPFAKRAVIYERALKALPGSYKLWHAYLRERL 356 E+++ P+ L W + + P K YER + P S + W Y+ + Sbjct: 22 EKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEI 76
>CO3_ONCMY (P98093) Complement C3-1 [Contains: Complement C3 beta chain;| Complement C3 alpha chain; C3a anaphylatoxin; Complement C3b alpha' chain; Complement C3c fragment; Complement C3dg fragment; Complement C3g fragment; Complement C3d fragment; Comple Length = 1640 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +3 Query: 285 IYERALKALPGSYKLWHAYLRERLDHV-RPHPISHPAYAXLN 407 + E+++ +LPGS AYL +RL H+ P+ ++ +YA N Sbjct: 1134 VCEQSVNSLPGSMAKAVAYLEKRLPHLTNPYAVAMTSYALAN 1175
>CLF1_USTMA (Q4PB37) Pre-mRNA-splicing factor CLF1| Length = 781 Score = 29.6 bits (65), Expect = 3.2 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAPFAKRA-VIYERALKALPGSYKLWHAYLRERL 356 +E+ + R + W +Y AS R IYERAL P LW Y + L Sbjct: 59 FEDRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQEL 115 Score = 29.3 bits (64), Expect = 4.1 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAPFAKRAV-IYERALKALPGSYKLWHAYL 344 YE + EP L W RY + A +Y+RA+ LP +LW+ Y+ Sbjct: 93 YERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAVSILPRIDQLWYKYV 145
>CLF1_CANAL (Q5AED6) Pre-mRNA-splicing factor CLF1| Length = 758 Score = 29.3 bits (64), Expect = 4.1 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = +3 Query: 183 LPYEEEILREPFKLKGWWRYL 245 + YE+EI +P+ WW+Y+ Sbjct: 373 IKYEQEIQNDPYDYDSWWKYM 393
>CLF1_KLULA (Q6CJK2) Pre-mRNA-splicing factor CLF1| Length = 684 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAPFAKRA-VIYERALKALPGSYKLWHAYL 344 YE + R L+ W RY +RA IYERAL G LW Y+ Sbjct: 52 YETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYI 104
>CD2B2_HUMAN (O95400) CD2 antigen cytoplasmic tail-binding protein 2 (CD2| cytoplasmic domain-binding protein) (CD2 tail-binding protein) Length = 341 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Frame = -2 Query: 356 EALAEVGVPELVAPRQRLEGALVDDGAL--GEGRRGAGDEVAP 234 +AL E G+ EL+ PR+ + GAL GA G+GR+G G +P Sbjct: 155 QALLE-GLLELLLPRETVAGALRRLGARGGGKGRKGPGQPSSP 196
>CRNL1_HUMAN (Q9BZJ0) Crooked neck-like protein 1 (Crooked neck homolog) (hCrn)| Length = 848 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 159 DLYPTEDDLPYEEEILREPFKLKGWWRYL-VARASAPFAKRAVIYERALKALP 314 D+ ++ YEEE+ P W+ YL + + A +YERA+ +P Sbjct: 470 DIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVP 522
>CLF1_CANGA (Q6FW76) Pre-mRNA-splicing factor CLF1| Length = 695 Score = 28.5 bits (62), Expect = 7.1 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = +3 Query: 231 WWRYLVARASAPFAKRAV-IYERALKALPGSYKLWHAYL--RERLDH 362 W RY+ + + A I ERA+ LP KLW+ YL E L H Sbjct: 98 WIRYIESELKLGYINHARNILERAITKLPRVDKLWYKYLIVEESLAH 144
>CRNL1_RAT (P63155) Crooked neck-like protein 1 (Crooked neck homolog)| (Crooked neck protein) Length = 690 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 159 DLYPTEDDLPYEEEILREPFKLKGWWRYL-VARASAPFAKRAVIYERALKALP 314 D+ ++ YEEE+ P W+ YL + + A +YERA+ +P Sbjct: 309 DIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVP 361
>CRNL1_MOUSE (P63154) Crooked neck-like protein 1 (Crooked neck homolog)| Length = 690 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +3 Query: 159 DLYPTEDDLPYEEEILREPFKLKGWWRYL-VARASAPFAKRAVIYERALKALP 314 D+ ++ YEEE+ P W+ YL + + A +YERA+ +P Sbjct: 309 DIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVP 361
>CLF1_PARBR (Q5K654) Pre-mRNA-splicing factor CLF1| Length = 677 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAPFAKRA-VIYERALKALPGSYKLWHAYLRERL 356 +E+ + R + W RY +RA ++ERAL P + LW Y+ + Sbjct: 61 FEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEM 117
>CLF1_MAGGR (Q527H0) Pre-mRNA-splicing factor CLF1| Length = 691 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Frame = +3 Query: 189 YEEEILREPFKLKGWWRYLVARASAP-FAKRAVIYERALKALPGSYKLWHAYLRERL 356 +E R F LK W +Y +A+ ++ERAL LW Y+ L Sbjct: 61 FESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAEL 117 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.132 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,919,427 Number of Sequences: 219361 Number of extensions: 495925 Number of successful extensions: 1295 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 1243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1281 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
