>gb|AF456245.1| Oryza sativa (japonica cultivar-group) NBS-LRR-like protein (YR5)
           mRNA, complete cds
          Length = 3134

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 331 tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
           |||||||||||||||||| |||||||  ||||||  || || |||||||||| |||||||
Sbjct: 247 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 306

                                                 
Query: 391 ctgaccatgatgggcaatgttataaggcagataggcac 428
           ||||| || |||  || |||||||   |||||||||||
Sbjct: 307 ctgacaatcatgaacagtgttatactacagataggcac 344

>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic
             sequence, complete sequence
          Length = 138826

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                         
Query: 331   tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
             |||||||||||||||||| |||||||  ||||||  || || |||||||||| |||||||
Sbjct: 15970 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 15911

                                                   
Query: 391   ctgaccatgatgggcaatgttataaggcagataggcac 428
             ||||| || |||  || |||||||   |||||||||||
Sbjct: 15910 ctgacaatcatgaacagtgttatactacagataggcac 15873



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                         
Query: 301   gaagccaccaaaagtgtcatagctaagatttctgaaaaggttactaatctgaaggaattg 360
             ||||||||||||  ||  ||||| ||| | |||||||| ||| | |||||||||||| | 
Sbjct: 59223 gaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaacta 59282

                                              
Query: 361   ccagtaaaagttgaggaaataaagaagcaactg 393
             ||   ||| ||||| |||||||||||| |||||
Sbjct: 59283 ccgacaaaggttgatgaaataaagaaggaactg 59315

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                           
Query: 331     tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
               |||||||||||||||||| |||||||  ||||||  || || |||||||||| |||||||
Sbjct: 6556760 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 6556701

                                                     
Query: 391     ctgaccatgatgggcaatgttataaggcagataggcac 428
               ||||| || |||  || |||||||   |||||||||||
Sbjct: 6556700 ctgacaatcatgaacagtgttatactacagataggcac 6556663



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                           
Query: 331     tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
               ||||||||| |||||||||||||||||||||| || || ||| ||||||||  |||  ||
Sbjct: 6804107 tctgaaaagattactaatctgaaggaattgccggtcaaggttaaggaaatagggaaagaa 6804166

                           
Query: 391     ctgaccatgatg 402
               |||| |||||||
Sbjct: 6804167 ctgaacatgatg 6804178



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 331     tctgaaaaggttactaatctgaagga 356
               ||||||||||||| ||||||||||||
Sbjct: 6760645 tctgaaaaggttaataatctgaagga 6760670



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                           
Query: 301     gaagccaccaaaagtgtcatagctaagatttctgaaaaggttactaatctgaaggaattg 360
               ||||||||||||  ||  ||||| ||| | |||||||| ||| | |||||||||||| | 
Sbjct: 6600013 gaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaacta 6600072

                                                
Query: 361     ccagtaaaagttgaggaaataaagaagcaactg 393
               ||   ||| ||||| |||||||||||| |||||
Sbjct: 6600073 ccgacaaaggttgatgaaataaagaaggaactg 6600105

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                           
Query: 331     tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
               |||||||||||||||||| |||||||  ||||||  || || |||||||||| |||||||
Sbjct: 6623227 tctgaaaaggttactaatttgaaggagatgccagagaaggtcgaggaaataaggaagcaa 6623168

                                                     
Query: 391     ctgaccatgatgggcaatgttataaggcagataggcac 428
               ||||| || |||  || |||||||   |||||||||||
Sbjct: 6623167 ctgacaatcatgaacagtgttatactacagataggcac 6623130



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                           
Query: 331     tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
               ||||||||| |||||||||||||||||||||| || || ||| ||||||||  |||  ||
Sbjct: 6870574 tctgaaaagattactaatctgaaggaattgccggtcaaggttaaggaaatagggaaagaa 6870633

                           
Query: 391     ctgaccatgatg 402
               |||| |||||||
Sbjct: 6870634 ctgaacatgatg 6870645



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 331     tctgaaaaggttactaatctgaagga 356
               ||||||||||||| ||||||||||||
Sbjct: 6827104 tctgaaaaggttaataatctgaagga 6827129



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                           
Query: 301     gaagccaccaaaagtgtcatagctaagatttctgaaaaggttactaatctgaaggaattg 360
               ||||||||||||  ||  ||||| ||| | |||||||| ||| | |||||||||||| | 
Sbjct: 6666480 gaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaacta 6666539

                                                
Query: 361     ccagtaaaagttgaggaaataaagaagcaactg 393
               ||   ||| ||||| |||||||||||| |||||
Sbjct: 6666540 ccgacaaaggttgatgaaataaagaaggaactg 6666572

>gb|AC119670.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0007H22, complete sequence
          Length = 160938

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 331   tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
             ||||||||| |||||||||||||||||||||| || || ||| ||||||||  |||  ||
Sbjct: 82744 tctgaaaagattactaatctgaaggaattgccggtcaaggttaaggaaatagggaaagaa 82685

                         
Query: 391   ctgaccatgatg 402
             |||| |||||||
Sbjct: 82684 ctgaacatgatg 82673



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 331    tctgaaaaggttactaatctgaagga 356
              ||||||||||||| ||||||||||||
Sbjct: 126214 tctgaaaaggttaataatctgaagga 126189

>gb|AC119071.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0044D15 BAC genomic
              sequence, complete sequence
          Length = 144544

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Plus

                                                                          
Query: 331    tctgaaaaggttactaatctgaaggaattgccagtaaaagttgaggaaataaagaagcaa 390
              ||||||||| |||||||||||||||||||||| || || ||| ||||||||  |||  ||
Sbjct: 134955 tctgaaaagattactaatctgaaggaattgccggtcaaggttaaggaaatagggaaagaa 135014

                          
Query: 391    ctgaccatgatg 402
              |||| |||||||
Sbjct: 135015 ctgaacatgatg 135026



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 331   tctgaaaaggttactaatctgaagga 356
             ||||||||||||| ||||||||||||
Sbjct: 91493 tctgaaaaggttaataatctgaagga 91518

>dbj|AK068380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146P17, full
           insert sequence
          Length = 1150

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 331 tctgaaaaggttactaatctgaagga 356
           ||||||||||||| ||||||||||||
Sbjct: 239 tctgaaaaggttaataatctgaagga 264

>gb|AY340168.1| Acanthophis pyrrhus isolate 1133 NADH dehydrogenase subunit 4 (ND4)
           gene, partial cds; mitochondrial gene for mitochondrial
           product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  aatcgccgcaatatccatcca 40
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>gb|AY340167.1| Acanthophis cf. laevis isolate 276 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  aatcgccgcaatatccatcca 40
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>gb|AY340166.1| Acanthophis cf. laevis isolate 1252 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  aatcgccgcaatatccatcca 40
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>gb|AY340165.1| Acanthophis cf. laevis isolate 1140 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 598

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  aatcgccgcaatatccatcca 40
           |||||||||||||||||||||
Sbjct: 125 aatcgccgcaatatccatcca 145

>gb|AY340163.1| Acanthophis antarcticus isolate 1192 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 638

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  aatcgccgcaatatccatcca 40
           |||||||||||||||||||||
Sbjct: 164 aatcgccgcaatatccatcca 184

>gb|AY340162.1| Acanthophis antarcticus isolate 1137 NADH dehydrogenase subunit 4
           (ND4) gene, partial cds; mitochondrial gene for
           mitochondrial product
          Length = 648

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 20  aatcgccgcaatatccatcca 40
           |||||||||||||||||||||
Sbjct: 174 aatcgccgcaatatccatcca 194

>dbj|AK065723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042N23, full
           insert sequence
          Length = 3161

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                       
Query: 301 gaagccaccaaaagtgtcatagctaagatttctgaaaaggttactaatctgaaggaattg 360
           ||||||||||||  ||  ||||| ||| | |||||||| ||| | |||||||||||| | 
Sbjct: 222 gaagccaccaaagctgctatagccaagctatctgaaaaagttgcaaatctgaaggaacta 281

                                            
Query: 361 ccagtaaaagttgaggaaataaagaagcaactg 393
           ||   ||| ||||| |||||||||||| |||||
Sbjct: 282 ccgacaaaggttgatgaaataaagaaggaactg 314

>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence
          Length = 216566

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   aaataaagaagcaactgacc 396
             ||||||||||||||||||||
Sbjct: 50035 aaataaagaagcaactgacc 50054

>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence
          Length = 195935

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    aaataaagaagcaactgacc 396
              ||||||||||||||||||||
Sbjct: 127715 aaataaagaagcaactgacc 127734

>gb|AY226507.1| Forficula auricularia isolate Fa9 transposon mariner Famar1 gene,
           partial sequence
          Length = 1024

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 ttgaggaaataaagaagcaa 390
           ||||||||||||||||||||
Sbjct: 53  ttgaggaaataaagaagcaa 34

>gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chromosome x, complete
              sequence
          Length = 188826

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 363    agtaaaagttgaggaaataaagaa 386
              |||||||||||| |||||||||||
Sbjct: 150900 agtaaaagttgaagaaataaagaa 150923

>emb|AL953870.2| Human DNA sequence from clone RP11-97N5 on chromosome X Contains the
            gene for sarcoma antigen (SAGE), a novel pseudogene and
            the 3' end of a novel gene (LOC93380), complete sequence
          Length = 69776

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 363  agtaaaagttgaggaaataaagaa 386
            |||||||||||| |||||||||||
Sbjct: 2411 agtaaaagttgaagaaataaagaa 2388

>emb|AL365190.16| Human DNA sequence from clone RP11-512H14 on chromosome 9 Contains the
             5' end of the TLE1 gene for transducin-like enhancer of
             split 1 (E(sp1) homolog, Drosophila) (ESG, GRG1), the 5'
             end of a novel gene and two CpG isalnds, complete sequence
          Length = 89468

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   atgatgggcaatgttataag 416
             ||||||||||||||||||||
Sbjct: 60530 atgatgggcaatgttataag 60549

>gb|AC182842.3| Pan troglodytes BAC clone CH251-38C10 from chromosome x, complete
              sequence
          Length = 206627

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 363    agtaaaagttgaggaaataaagaa 386
              |||||||||||| |||||||||||
Sbjct: 180869 agtaaaagttgaagaaataaagaa 180846



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 363   agtaaaagttgaggaaataaagaa 386
             |||||||||||| |||||||||||
Sbjct: 76234 agtaaaagttgaagaaataaagaa 76257

>emb|BX537110.7| Zebrafish DNA sequence from clone CH211-205J18 in linkage group 6,
             complete sequence
          Length = 166351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   aaagttgaggaaataaagaa 386
             ||||||||||||||||||||
Sbjct: 88229 aaagttgaggaaataaagaa 88248

>gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chromosome x, complete
              sequence
          Length = 193874

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 363    agtaaaagttgaggaaataaagaa 386
              |||||||||||| |||||||||||
Sbjct: 137711 agtaaaagttgaagaaataaagaa 137734

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     aaagttgaggaaataaagaa 386
               ||||||||||||||||||||
Sbjct: 3641049 aaagttgaggaaataaagaa 3641068


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,482,856
Number of Sequences: 3902068
Number of extensions: 3482856
Number of successful extensions: 59917
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 59803
Number of HSP's gapped (non-prelim): 111
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)