ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
3emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 66 1e-07
4ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predic... 48 0.025
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
6dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
7dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
8ref|XM_506270.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.40
9ref|XM_477569.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.40
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.40
12dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
13dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
14dbj|AK073103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
15dbj|AK060569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
16ref|XM_482754.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
17gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
18gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polye... 42 1.6
19gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
20gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
25gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
26ref|XM_429190.1| PREDICTED: Gallus gallus similar to PHD finger ... 40 6.2
27gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
28gb|AY364648.1| Chlamydomonas reinhardtii NIMA-related kinase 6 m... 40 6.2
29ref|XM_756260.1| Ustilago maydis 521 hypothetical protein (UM052... 40 6.2
30gb|AY444342.1| Oryza sativa chitinase gene, complete cds 40 6.2
31gb|BC030019.2| Homo sapiens phosphoribosyl pyrophosphate synthet... 40 6.2
32emb|Y00971.1|HSPRPS2 Human mRNA for phosphoriobosyl pyrophosphat... 40 6.2
33gb|BC040483.1| Homo sapiens phosphoribosyl pyrophosphate synthet... 40 6.2
34emb|CR859794.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2426 (from cl... 40 6.2
35gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswel... 40 6.2
36gb|L40337.1|RICRCH1 Oryza sativa chitinase (Rcht1) mRNA, complet... 40 6.2
37dbj|AB169827.1| Macaca fascicularis brain cDNA, clone: QflA-1360... 40 6.2
38gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 6.2
39gb|AF305543.1|AF305543 Chlamydomonas reinhardtii cytochrome c ox... 40 6.2
40dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
41dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
42dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
43gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Hum... 40 6.2
44gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.2
45gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Can... 40 6.2
46dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
47dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
48dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
49dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
50dbj|AK069065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
51ref|NM_002765.3| Homo sapiens phosphoribosyl pyrophosphate synth... 40 6.2
52ref|NM_001039091.1| Homo sapiens phosphoribosyl pyrophosphate sy... 40 6.2
53gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44... 40 6.2
54gb|BC110875.1| Homo sapiens phosphoribosyl pyrophosphate synthet... 40 6.2
55gb|L37289.1|RICCHITA Oryza sativa chitinase mRNA, complete cds 40 6.2
56dbj|D28134.1|HUMPRPSII Homo sapiens gene for phosphoribosylpyrop... 40 6.2
57dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN... 40 6.2 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                           
Query: 341     catccaccccggcgtttggggccgcgccggctggtgganttggccagccatccacgccgg 400
               ||||||||||||||||||| ||  || | ||||| |   | |||||||||||||| ||||
Sbjct: 3346680 catccaccccggcgtttggcgcgacgtccgctggggccttcggccagccatccactccgg 3346739

                                                                   
Query: 401     cgttcggcaccccgtcgtcctctccgttcgggagctccacgccagcctttgg 452
               |||| ||||| || || |||||||| || ||||||||  ||||||| |||||
Sbjct: 3346740 cgtttggcactccatcatcctctccatttgggagctctgcgccagcttttgg 3346791



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                           
Query: 380     ttggccagccatccacgccggcgttcggcaccccgtcgtcctctccgttcgggagctcca 439
               |||||||||||||||| | |||||| ||||| ||||| |||||||| || |||||||| |
Sbjct: 3338113 ttggccagccatccactcaggcgtttggcactccgtcatcctctccatttgggagctcta 3338172

                            
Query: 440     cgccagcctttgg 452
               | ||||| |||||
Sbjct: 3338173 caccagcttttgg 3338185



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                           
Query: 133     gggcagtcttccgccagcgcttttgggcagacctctagcaaccctttcgaagcccaatca 192
               |||||||| ||| | ||| |||| || |||||||| ||||||||||| |  |||||  ||
Sbjct: 3346439 gggcagtcgtccactagccctttcggccagacctcaagcaacccttttggggcccagaca 3346498

                                          
Query: 193     gggttcggccagaccagcaccgccacc 219
               || || |||||| |||||||| |||||
Sbjct: 3346499 ggatttggccaggccagcacctccacc 3346525



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 307     tttggtcagccatccgctccggcgtt 332
               ||||| ||||||||||||||||||||
Sbjct: 3338064 tttggccagccatccgctccggcgtt 3338089



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 307     tttggtcagccatccgctccggcgtt 332
               ||||| ||||||||||||||||||||
Sbjct: 3338016 tttggccagccatccgctccggcgtt 3338041



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 152     cttttgggcagacctctagcaaccctttcg 181
               |||||||||||||||| |||||||| ||||
Sbjct: 3337801 cttttgggcagacctcaagcaacccattcg 3337830



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 380     ttggccagccatccacgccggcgtt 404
               |||||||||||||||| ||||||||
Sbjct: 3346671 ttggccagccatccaccccggcgtt 3346695
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                           
Query: 341     catccaccccggcgtttggggccgcgccggctggtgganttggccagccatccacgccgg 400
               ||||||||||||||||||| ||  || | ||||| |   | |||||||||||||| ||||
Sbjct: 3346625 catccaccccggcgtttggcgcgacgtccgctggggccttcggccagccatccactccgg 3346684

                                                                   
Query: 401     cgttcggcaccccgtcgtcctctccgttcgggagctccacgccagcctttgg 452
               |||| ||||| || || |||||||| || ||||||||  ||||||| |||||
Sbjct: 3346685 cgtttggcactccatcatcctctccatttgggagctctgcgccagcttttgg 3346736



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                           
Query: 380     ttggccagccatccacgccggcgttcggcaccccgtcgtcctctccgttcgggagctcca 439
               |||||||||||||||| | |||||| ||||| ||||| |||||||| || |||||||| |
Sbjct: 3338058 ttggccagccatccactcaggcgtttggcactccgtcatcctctccatttgggagctcta 3338117

                            
Query: 440     cgccagcctttgg 452
               | ||||| |||||
Sbjct: 3338118 caccagcttttgg 3338130



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                           
Query: 133     gggcagtcttccgccagcgcttttgggcagacctctagcaaccctttcgaagcccaatca 192
               |||||||| ||| | ||| |||| || |||||||| ||||||||||| |  |||||  ||
Sbjct: 3346384 gggcagtcgtccactagccctttcggccagacctcaagcaacccttttggggcccagaca 3346443

                                          
Query: 193     gggttcggccagaccagcaccgccacc 219
               || || |||||| |||||||| |||||
Sbjct: 3346444 ggatttggccaggccagcacctccacc 3346470



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 307     tttggtcagccatccgctccggcgtt 332
               ||||| ||||||||||||||||||||
Sbjct: 3338009 tttggccagccatccgctccggcgtt 3338034



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 307     tttggtcagccatccgctccggcgtt 332
               ||||| ||||||||||||||||||||
Sbjct: 3337961 tttggccagccatccgctccggcgtt 3337986



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 152     cttttgggcagacctctagcaaccctttcg 181
               |||||||||||||||| |||||||| ||||
Sbjct: 3337746 cttttgggcagacctcaagcaacccattcg 3337775



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 380     ttggccagccatccacgccggcgtt 404
               |||||||||||||||| ||||||||
Sbjct: 3346616 ttggccagccatccaccccggcgtt 3346640
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>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                         
Query: 341   catccaccccggcgtttggggccgcgccggctggtgganttggccagccatccacgccgg 400
             ||||||||||||||||||| ||  || | ||||| |   | |||||||||||||| ||||
Sbjct: 25733 catccaccccggcgtttggcgcgacgtccgctggggccttcggccagccatccactccgg 25792

                                                                 
Query: 401   cgttcggcaccccgtcgtcctctccgttcgggagctccacgccagcctttgg 452
             |||| ||||| || || |||||||| || ||||||||  ||||||| |||||
Sbjct: 25793 cgtttggcactccatcatcctctccatttgggagctctgcgccagcttttgg 25844



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                         
Query: 380   ttggccagccatccacgccggcgttcggcaccccgtcgtcctctccgttcgggagctcca 439
             |||||||||||||||| | |||||| ||||| ||||| |||||||| || |||||||| |
Sbjct: 17166 ttggccagccatccactcaggcgtttggcactccgtcatcctctccatttgggagctcta 17225

                          
Query: 440   cgccagcctttgg 452
             | ||||| |||||
Sbjct: 17226 caccagcttttgg 17238



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                         
Query: 133   gggcagtcttccgccagcgcttttgggcagacctctagcaaccctttcgaagcccaatca 192
             |||||||| ||| | ||| |||| || |||||||| ||||||||||| |  |||||  ||
Sbjct: 25492 gggcagtcgtccactagccctttcggccagacctcaagcaacccttttggggcccagaca 25551

                                        
Query: 193   gggttcggccagaccagcaccgccacc 219
             || || |||||| |||||||| |||||
Sbjct: 25552 ggatttggccaggccagcacctccacc 25578



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 307   tttggtcagccatccgctccggcgtt 332
             ||||| ||||||||||||||||||||
Sbjct: 17117 tttggccagccatccgctccggcgtt 17142



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 307   tttggtcagccatccgctccggcgtt 332
             ||||| ||||||||||||||||||||
Sbjct: 17069 tttggccagccatccgctccggcgtt 17094



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 152   cttttgggcagacctctagcaaccctttcg 181
             |||||||||||||||| |||||||| ||||
Sbjct: 16854 cttttgggcagacctcaagcaacccattcg 16883



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 380   ttggccagccatccacgccggcgtt 404
             |||||||||||||||| ||||||||
Sbjct: 25724 ttggccagccatccaccccggcgtt 25748
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>ref|NM_190668.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1359

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 274 cctttcggcgccacctcctccgccgccg 301
           |||||||||||||||||| |||||||||
Sbjct: 941 cctttcggcgccacctccgccgccgccg 914
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 274      cctttcggcgccacctcctccgccgccg 301
                |||||||||||||||||| |||||||||
Sbjct: 37006126 cctttcggcgccacctccgccgccgccg 37006099
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>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1402_H07
          Length = 140620

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 274   cctttcggcgccacctcctccgccgccg 301
             |||||||||||||||||| |||||||||
Sbjct: 96430 cctttcggcgccacctccgccgccgccg 96403
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>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683F02
          Length = 153388

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 274  cctttcggcgccacctcctccgccgccg 301
            |||||||||||||||||| |||||||||
Sbjct: 7267 cctttcggcgccacctccgccgccgccg 7240
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>ref|XM_506270.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.107 mRNA
          Length = 1733

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 391 tccacgccggcgttcggcaccccgtcgtcc 420
           |||||||||||||||||| | |||||||||
Sbjct: 183 tccacgccggcgttcggcgcgccgtcgtcc 212
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>ref|XM_477569.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1662

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 391 tccacgccggcgttcggcaccccgtcgtcc 420
           |||||||||||||||||| | |||||||||
Sbjct: 217 tccacgccggcgttcggcgcgccgtcgtcc 246
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 391      tccacgccggcgttcggcaccccgtcgtcc 420
                |||||||||||||||||| | |||||||||
Sbjct: 11560373 tccacgccggcgttcggcgcgccgtcgtcc 11560402
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 225     cttcggcagcccgaccaccgcc 246
               ||||||||||||||||||||||
Sbjct: 8383722 cttcggcagcccgaccaccgcc 8383743
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 391    tccacgccggcgttcggcaccccgtcgtcc 420
              |||||||||||||||||| | |||||||||
Sbjct: 124031 tccacgccggcgttcggcgcgccgtcgtcc 124060
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>dbj|AP006479.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:B1272H04
          Length = 87113

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 391  tccacgccggcgttcggcaccccgtcgtcc 420
            |||||||||||||||||| | |||||||||
Sbjct: 5745 tccacgccggcgttcggcgcgccgtcgtcc 5774
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>dbj|AK073103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024G02, full
           insert sequence
          Length = 1662

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 391 tccacgccggcgttcggcaccccgtcgtcc 420
           |||||||||||||||||| | |||||||||
Sbjct: 217 tccacgccggcgttcggcgcgccgtcgtcc 246
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>dbj|AK060569.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C01, full
           insert sequence
          Length = 1733

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 391 tccacgccggcgttcggcaccccgtcgtcc 420
           |||||||||||||||||| | |||||||||
Sbjct: 183 tccacgccggcgttcggcgcgccgtcgtcc 212
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>ref|XM_482754.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 531

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 279 cggcgccacctcctccgccgccggt 303
           ||||||| |||||||||||||||||
Sbjct: 189 cggcgccgcctcctccgccgccggt 213
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>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0060K21, complete sequence
          Length = 153973

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   cgccacctcctccgccgccgg 302
             |||||||||||||||||||||
Sbjct: 15863 cgccacctcctccgccgccgg 15843
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>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
             biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 278   tcggcgccacctcctccgccg 298
             |||||||||||||||||||||
Sbjct: 93982 tcggcgccacctcctccgccg 94002
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>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0072L08, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    cgccacctcctccgccgccgg 302
              |||||||||||||||||||||
Sbjct: 136019 cgccacctcctccgccgccgg 135999
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>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0072L08, sequencing in progress, complete sequence
          Length = 152272

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    cgccacctcctccgccgccgg 302
              |||||||||||||||||||||
Sbjct: 136019 cgccacctcctccgccgccgg 135999
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 282      cgccacctcctccgccgccgg 302
                |||||||||||||||||||||
Sbjct: 21133704 cgccacctcctccgccgccgg 21133684
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 279      cggcgccacctcctccgccgccggt 303
                ||||||| |||||||||||||||||
Sbjct: 22355285 cggcgccgcctcctccgccgccggt 22355309
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>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1144B06
          Length = 133689

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 279   cggcgccacctcctccgccgccggt 303
             ||||||| |||||||||||||||||
Sbjct: 52268 cggcgccgcctcctccgccgccggt 52292
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 282      cgccacctcctccgccgccgg 302
                |||||||||||||||||||||
Sbjct: 21443945 cgccacctcctccgccgccgg 21443925
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>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
             complete sequence
          Length = 125650

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   cgccacctcctccgccgccg 301
             ||||||||||||||||||||
Sbjct: 88534 cgccacctcctccgccgccg 88553
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>ref|XM_429190.1| PREDICTED: Gallus gallus similar to PHD finger protein 7 (LOC431638),
            mRNA
          Length = 1806

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 197  tcggccagaccagcaccgcc 216
            ||||||||||||||||||||
Sbjct: 1485 tcggccagaccagcaccgcc 1504
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   ttcggcgccacctcctccgccgcc 300
             |||| |||||||||||||||||||
Sbjct: 44761 ttcgccgccacctcctccgccgcc 44738
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>gb|AY364648.1| Chlamydomonas reinhardtii NIMA-related kinase 6 mRNA, complete cds
          Length = 2568

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  cgccacctcctccgccgccg 301
            ||||||||||||||||||||
Sbjct: 1716 cgccacctcctccgccgccg 1697
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>ref|XM_756260.1| Ustilago maydis 521 hypothetical protein (UM05206.1) partial mRNA
          Length = 4086

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 197 tcggccagaccagcaccgccacca 220
           ||||||||||||||||| ||||||
Sbjct: 336 tcggccagaccagcaccaccacca 359
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>gb|AY444342.1| Oryza sativa chitinase gene, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 214 cgccacctcctccgccgccg 195
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>gb|BC030019.2| Homo sapiens phosphoribosyl pyrophosphate synthetase 2, mRNA (cDNA
           clone IMAGE:4830609), partial cds
          Length = 2477

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 37  cgccacctcctccgccgccg 56
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>emb|Y00971.1|HSPRPS2 Human mRNA for phosphoriobosyl pyrophosphate synthetase subunit II
           (EC 2.7.6.1)
          Length = 2457

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 13  cgccacctcctccgccgccg 32
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>gb|BC040483.1| Homo sapiens phosphoribosyl pyrophosphate synthetase 2, mRNA (cDNA
           clone IMAGE:5272983), partial cds
          Length = 2517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 39  cgccacctcctccgccgccg 58
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>emb|CR859794.1| Pongo pygmaeus mRNA; cDNA DKFZp469O2426 (from clone DKFZp469O2426)
          Length = 2482

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 38  cgccacctcctccgccgccg 57
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>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 167344

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ccagaccagcaccgccacca 220
              ||||||||||||||||||||
Sbjct: 131359 ccagaccagcaccgccacca 131340
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>gb|L40337.1|RICRCH1 Oryza sativa chitinase (Rcht1) mRNA, complete cds
          Length = 1204

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 220 cgccacctcctccgccgccg 201
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>dbj|AB169827.1| Macaca fascicularis brain cDNA, clone: QflA-13604, similar to human
           phosphoribosyl pyrophosphate synthetase 2 (PRPS2), mRNA,
           RefSeq: NM_002765.2
          Length = 2568

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 66  cgccacctcctccgccgccg 85
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ccagaccagcaccgccacca 220
             ||||||||||||||||||||
Sbjct: 22245 ccagaccagcaccgccacca 22226
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>gb|AF305543.1|AF305543 Chlamydomonas reinhardtii cytochrome c oxidase subunit II (cox2b)
           gene, complete cds; nuclear gene for mitochondrial
           product
          Length = 2877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 355 tttggggccgcgccggctgg 374
           ||||||||||||||||||||
Sbjct: 239 tttggggccgcgccggctgg 258
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      cgccacctcctccgccgccg 301
                ||||||||||||||||||||
Sbjct: 28418127 cgccacctcctccgccgccg 28418146
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 277      ttcggcgccacctcctccgccgcc 300
                |||| |||||||||||||||||||
Sbjct: 27814344 ttcgccgccacctcctccgccgcc 27814321



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 282      cgccacctcctccgccgccg 301
                ||||||||||||||||||||
Sbjct: 20666494 cgccacctcctccgccgccg 20666513
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     cgccacctcctccgccgccg 301
               ||||||||||||||||||||
Sbjct: 4408021 cgccacctcctccgccgccg 4408040
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>gb|AC005859.1| Homo sapiens X BAC GSHB-324M7 (Genome Systems Human BAC Library)
             complete sequence
          Length = 202879

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   cgccacctcctccgccgccg 301
             ||||||||||||||||||||
Sbjct: 71230 cgccacctcctccgccgccg 71249
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 265     accacctcgcctttcggcgccacctcct 292
               ||||||||||| |||||||||| |||||
Sbjct: 1537152 accacctcgccgttcggcgccagctcct 1537179
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>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    gatagaggaagaagaaacac 30
             ||||||||||||||||||||
Sbjct: 72941 gatagaggaagaagaaacac 72922
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0661G04
          Length = 157292

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    cgccacctcctccgccgccg 301
              ||||||||||||||||||||
Sbjct: 130705 cgccacctcctccgccgccg 130724
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>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   cgccacctcctccgccgccg 301
             ||||||||||||||||||||
Sbjct: 91585 cgccacctcctccgccgccg 91604
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>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0532H03
          Length = 166128

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   cgccacctcctccgccgccg 301
             ||||||||||||||||||||
Sbjct: 25160 cgccacctcctccgccgccg 25179
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>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full
           insert sequence
          Length = 2712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 277 ttcggcgccacctcctccgccgcc 300
           |||| |||||||||||||||||||
Sbjct: 292 ttcgccgccacctcctccgccgcc 269
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>dbj|AK069065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007H17, full
           insert sequence
          Length = 1675

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 35  cgccacctcctccgccgccg 54
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>ref|NM_002765.3| Homo sapiens phosphoribosyl pyrophosphate synthetase 2 (PRPS2),
           transcript variant 2, mRNA
          Length = 2509

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 77  cgccacctcctccgccgccg 96
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>ref|NM_001039091.1| Homo sapiens phosphoribosyl pyrophosphate synthetase 2 (PRPS2),
           transcript variant 1, mRNA
          Length = 2518

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 77  cgccacctcctccgccgccg 96
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>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete
              sequence
          Length = 265524

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    ccagaccagcaccgccacca 220
              ||||||||||||||||||||
Sbjct: 142397 ccagaccagcaccgccacca 142378
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>gb|BC110875.1| Homo sapiens phosphoribosyl pyrophosphate synthetase 2, mRNA (cDNA
           clone IMAGE:6472836), partial cds
          Length = 2489

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 30  cgccacctcctccgccgccg 49
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>gb|L37289.1|RICCHITA Oryza sativa chitinase mRNA, complete cds
          Length = 1291

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 256 cgccacctcctccgccgccg 237
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>dbj|D28134.1|HUMPRPSII Homo sapiens gene for phosphoribosylpyrophosphate synthetase
           isoform II, promoter region and exon 1
          Length = 600

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 282 cgccacctcctccgccgccg 301
           ||||||||||||||||||||
Sbjct: 350 cgccacctcctccgccgccg 369
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>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1,
           complete cds
          Length = 2622

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 277 ttcggcgccacctcctccgccgcc 300
           |||| |||||||||||||||||||
Sbjct: 184 ttcgccgccacctcctccgccgcc 161


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,315,321
Number of Sequences: 3902068
Number of extensions: 2315321
Number of successful extensions: 59302
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58275
Number of HSP's gapped (non-prelim): 1027
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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