>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -1

Query: 184 ALQPWQPSPSTSQRG---VPLLLRARRKPSRGAKSPS 83
           A+ PW+PSPS ++     VP+L  +  KPS    SPS
Sbjct: 75  AIAPWEPSPSPTETAWTVVPVLKSSALKPSTVQFSPS 111

>GALT3_CAEEL (P34678) Polypeptide N-acetylgalactosaminyltransferase 3 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           3) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 3) (pp-GaNTase 3)
           (GalNAc-T1)
          Length = 612

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = -2

Query: 375 PITVIVSINLLGCQTASASTWNQKTRASSFSWKTVRRIDAPGGGEDRGRELAARGVAGG 199
           PI  ++S +     TAS +TW       +F W  V + +    G DR   +    +AGG
Sbjct: 290 PIIDVISDDTFEYVTASETTWGGFNWHLNFRWYAVPKRELNRRGSDRSMPIQTPTIAGG 348

>LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1|
          Length = 676

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 128 APCAAKTLAGGEEPQPPSGKRRLPY 54
           AP A  TLA G+ P PP  +R  PY
Sbjct: 113 APGAVTTLAAGQPPYPPQEQRSRPY 137

>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6|
          Length = 704

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -2

Query: 261 DAPGGGEDRGRELAARGVAGGE---EGPARSNHGSHLPQ 154
           +A GGG DRG E  ARG  G     E    +  G+ +PQ
Sbjct: 59  EAGGGGPDRGPEAEARGTRGAHGETEAEEGAPEGAEVPQ 97

>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein 1|
            (PRAX-1) (Peripheral benzodiazepine receptor-interacting
            protein) (PBR-IP) (RIM-binding protein 1) (RIM-BP1)
          Length = 1857

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +1

Query: 187  RALLAARYSPRGELAAAILSPARRVDSPHSLPAERGCP 300
            R ++    SP GE A +I +P     +P SLPA   CP
Sbjct: 1053 REVVVRTMSPHGESADSIPAPITPALAPASLPARVSCP 1090

>GSHB_BRAJU (O23732) Glutathione synthetase, chloroplast precursor (EC 6.3.2.3)|
           (Glutathione synthase) (GSH synthetase) (GSH-S)
          Length = 530

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 352 DGDYHRDWGVXNAGSYGGESRSNTRLIIS 438
           DG YH+D  +   G YG   R+  R+II+
Sbjct: 470 DGVYHKDQAISELGVYGAYLRNKERVIIN 498

>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1237

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -1

Query: 175 PWQPSPSTSQRGVPLLLR----ARRKPSRGAKSPSRQ 77
           P QPSP+T+   V   L+    A RKP R + SP  Q
Sbjct: 140 PQQPSPATTPSAVQFFLQEDEGAERKPERTSPSPPTQ 176

>ATG9A_RAT (Q5FWU3) Autophagy-related protein 9A (APG9-like 1)|
          Length = 839

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -2

Query: 201 GEEGPARSNHGSHLPQPL--SAAYPCCS 124
           GE  P     G+  PQP+  SA+YPC +
Sbjct: 739 GESAPEEGGEGARAPQPIPRSASYPCAT 766

>RS4_LACAC (Q5FKX2) 30S ribosomal protein S4|
          Length = 203

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -2

Query: 303 TRASSFSWKTVRRIDAPGGGEDRGRELAARGVAGGEEGPARSNHGSHLPQPL 148
           +R +  SWK  RR+     G   G+ELA R  A G+ GP      S   Q L
Sbjct: 2   SRYTGPSWKRSRRLGISLSGT--GKELARRNYAPGQHGPNSRGRLSEYGQQL 51

>TRIM7_MOUSE (Q923T7) Tripartite motif protein 7 (Glycogenin-interacting|
           protein)
          Length = 510

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +1

Query: 232 AAILSPARRVDSPHSLPAERGCPRFLVPRRGAGSLASE 345
           AA++S  RR   P + P ERG P   VP R A +  S+
Sbjct: 96  AAVVSLLRRFSLPPTAPGERGTP--AVPARAAAARCSQ 131


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,549,091
Number of Sequences: 219361
Number of extensions: 1119177
Number of successful extensions: 3933
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3931
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)