ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39e11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463934.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2784 Score = 155 bits (78), Expect = 1e-34 Identities = 138/158 (87%) Strand = Plus / Plus Query: 258 cgtgtgattcgctcgttgaaggacaagcgcaatgatgagatgaaagctactgccgaccag 317 |||||| ||||||| |||||||| ||||||||||| ||| ||||| ||| | || ||| Sbjct: 184 cgtgtggttcgctctttgaaggataagcgcaatgaagagttgaaaattaccgttgatcag 243 Query: 318 atgcgcaatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctc 377 |||||||||||||||||||||||||||||| | | ||| |||||||| || || |||||| Sbjct: 244 atgcgcaatgcaatgaagatcaatgactgggtgaacttacaagagagtttcgagaagctc 303 Query: 378 aataagcagcttgagaaggttgttcgtgtcaatgaatc 415 || ||||||||||||||||| ||||||||||||||||| Sbjct: 304 aacaagcagcttgagaaggtggttcgtgtcaatgaatc 341 Score = 89.7 bits (45), Expect = 7e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 81 atggcatctcgtttttggggacagggaggcagtgactctgaggaggaggtggacgagatt 140 |||||||||||||| ||||||||||||| ||| |||||||||||||||| | | |||||| Sbjct: 1 atggcatctcgtttctggggacagggagacagcgactctgaggaggaggagcaggagatt 60 Query: 141 gagtcagaa 149 ||||||||| Sbjct: 61 gagtcagaa 69
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 155 bits (78), Expect = 1e-34 Identities = 138/158 (87%) Strand = Plus / Plus Query: 258 cgtgtgattcgctcgttgaaggacaagcgcaatgatgagatgaaagctactgccgaccag 317 |||||| ||||||| |||||||| ||||||||||| ||| ||||| ||| | || ||| Sbjct: 1219615 cgtgtggttcgctctttgaaggataagcgcaatgaagagttgaaaattaccgttgatcag 1219674 Query: 318 atgcgcaatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctc 377 |||||||||||||||||||||||||||||| | | ||| |||||||| || || |||||| Sbjct: 1219675 atgcgcaatgcaatgaagatcaatgactgggtgaacttacaagagagtttcgagaagctc 1219734 Query: 378 aataagcagcttgagaaggttgttcgtgtcaatgaatc 415 || ||||||||||||||||| ||||||||||||||||| Sbjct: 1219735 aacaagcagcttgagaaggtggttcgtgtcaatgaatc 1219772 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 102 cagggaggcagtgactctgaggaggaggtggacgagattgagtcagaa 149 ||||||| ||| |||||||||||||||| | | ||||||||||||||| Sbjct: 1219453 cagggagacagcgactctgaggaggaggagcaggagattgagtcagaa 1219500 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagg 105 ||||||||||||||||||| |||||||||| Sbjct: 1219301 cagccatggcatctcgtttctggggacagg 1219330
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 155 bits (78), Expect = 1e-34 Identities = 138/158 (87%) Strand = Plus / Plus Query: 258 cgtgtgattcgctcgttgaaggacaagcgcaatgatgagatgaaagctactgccgaccag 317 |||||| ||||||| |||||||| ||||||||||| ||| ||||| ||| | || ||| Sbjct: 50706 cgtgtggttcgctctttgaaggataagcgcaatgaagagttgaaaattaccgttgatcag 50765 Query: 318 atgcgcaatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctc 377 |||||||||||||||||||||||||||||| | | ||| |||||||| || || |||||| Sbjct: 50766 atgcgcaatgcaatgaagatcaatgactgggtgaacttacaagagagtttcgagaagctc 50825 Query: 378 aataagcagcttgagaaggttgttcgtgtcaatgaatc 415 || ||||||||||||||||| ||||||||||||||||| Sbjct: 50826 aacaagcagcttgagaaggtggttcgtgtcaatgaatc 50863 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 102 cagggaggcagtgactctgaggaggaggtggacgagattgagtcagaa 149 ||||||| ||| |||||||||||||||| | | ||||||||||||||| Sbjct: 50544 cagggagacagcgactctgaggaggaggagcaggagattgagtcagaa 50591 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagg 105 ||||||||||||||||||| |||||||||| Sbjct: 50392 cagccatggcatctcgtttctggggacagg 50421
>ref|XM_506148.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474G09.102 mRNA Length = 3214 Score = 143 bits (72), Expect = 6e-31 Identities = 170/202 (84%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 228 gacagtgacgactctgatactgagagccatcgtgtgattcgctcgttgaaggacaagcgc 287 ||||||||||| |||||| ||| | || |||||| | ||||| |||||||| |||||| Sbjct: 318 gacagtgacgagtctgattctg---gtcagcgtgtggtccgctccttgaaggataagcgc 374 Query: 288 aatgatgagatgaaagctactgccgaccagatgcgcaatgcaatgaagatcaatgactgg 347 ||||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 375 aatgaggagttgaaaattacggttgatcagatgcgcaatgcaatgaagatcaatgactgg 434 Query: 348 cttagcttgcaagagagctttgacaagctcaataagcagcttgagaaggttgttcgtgtc 407 | | || |||||||| || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 435 gtgaatttacaagagagtttcgagaagctcaacaagcagcttgagaaggtggttcgtgtc 494 Query: 408 aatgaatctaccaaaattccaa 429 |||||||| |||| | |||||| Sbjct: 495 aatgaatccaccacagttccaa 516 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagggaggcagtgactctgaggaggaggtggacg 135 ||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| | | | Sbjct: 160 cagccatggcatcccgtttttggggacagggagacagcgactccgaggaggaggagcagg 219 Query: 136 agattgagtcagaa 149 |||||||||||||| Sbjct: 220 agattgagtcagaa 233
>ref|XM_476451.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3207 Score = 143 bits (72), Expect = 6e-31 Identities = 170/202 (84%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 228 gacagtgacgactctgatactgagagccatcgtgtgattcgctcgttgaaggacaagcgc 287 ||||||||||| |||||| ||| | || |||||| | ||||| |||||||| |||||| Sbjct: 311 gacagtgacgagtctgattctg---gtcagcgtgtggtccgctccttgaaggataagcgc 367 Query: 288 aatgatgagatgaaagctactgccgaccagatgcgcaatgcaatgaagatcaatgactgg 347 ||||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 368 aatgaggagttgaaaattacggttgatcagatgcgcaatgcaatgaagatcaatgactgg 427 Query: 348 cttagcttgcaagagagctttgacaagctcaataagcagcttgagaaggttgttcgtgtc 407 | | || |||||||| || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 428 gtgaatttacaagagagtttcgagaagctcaacaagcagcttgagaaggtggttcgtgtc 487 Query: 408 aatgaatctaccaaaattccaa 429 |||||||| |||| | |||||| Sbjct: 488 aatgaatccaccacagttccaa 509 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagggaggcagtgactctgaggaggaggtggacg 135 ||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| | | | Sbjct: 153 cagccatggcatcccgtttttggggacagggagacagcgactccgaggaggaggagcagg 212 Query: 136 agattgagtcagaa 149 |||||||||||||| Sbjct: 213 agattgagtcagaa 226
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 143 bits (72), Expect = 6e-31 Identities = 170/202 (84%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 228 gacagtgacgactctgatactgagagccatcgtgtgattcgctcgttgaaggacaagcgc 287 ||||||||||| |||||| ||| | || |||||| | ||||| |||||||| |||||| Sbjct: 1274464 gacagtgacgagtctgattctg---gtcagcgtgtggtccgctccttgaaggataagcgc 1274520 Query: 288 aatgatgagatgaaagctactgccgaccagatgcgcaatgcaatgaagatcaatgactgg 347 ||||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 1274521 aatgaggagttgaaaattacggttgatcagatgcgcaatgcaatgaagatcaatgactgg 1274580 Query: 348 cttagcttgcaagagagctttgacaagctcaataagcagcttgagaaggttgttcgtgtc 407 | | || |||||||| || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 1274581 gtgaatttacaagagagtttcgagaagctcaacaagcagcttgagaaggtggttcgtgtc 1274640 Query: 408 aatgaatctaccaaaattccaa 429 |||||||| |||| | |||||| Sbjct: 1274641 aatgaatccaccacagttccaa 1274662 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagg 105 ||||||||||||| |||||||||||||||| Sbjct: 1274172 cagccatggcatcccgtttttggggacagg 1274201 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 102 cagggaggcagtgactctgaggaggaggtggacgagattgagtcagaa 149 ||||||| ||| ||||| |||||||||| | | ||||||||||||||| Sbjct: 1274332 cagggagacagcgactccgaggaggaggagcaggagattgagtcagaa 1274379
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 143 bits (72), Expect = 6e-31 Identities = 170/202 (84%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 228 gacagtgacgactctgatactgagagccatcgtgtgattcgctcgttgaaggacaagcgc 287 ||||||||||| |||||| ||| | || |||||| | ||||| |||||||| |||||| Sbjct: 39299 gacagtgacgagtctgattctg---gtcagcgtgtggtccgctccttgaaggataagcgc 39355 Query: 288 aatgatgagatgaaagctactgccgaccagatgcgcaatgcaatgaagatcaatgactgg 347 ||||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 39356 aatgaggagttgaaaattacggttgatcagatgcgcaatgcaatgaagatcaatgactgg 39415 Query: 348 cttagcttgcaagagagctttgacaagctcaataagcagcttgagaaggttgttcgtgtc 407 | | || |||||||| || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 39416 gtgaatttacaagagagtttcgagaagctcaacaagcagcttgagaaggtggttcgtgtc 39475 Query: 408 aatgaatctaccaaaattccaa 429 |||||||| |||| | |||||| Sbjct: 39476 aatgaatccaccacagttccaa 39497 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagg 105 ||||||||||||| |||||||||||||||| Sbjct: 39007 cagccatggcatcccgtttttggggacagg 39036 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 102 cagggaggcagtgactctgaggaggaggtggacgagattgagtcagaa 149 ||||||| ||| ||||| |||||||||| | | ||||||||||||||| Sbjct: 39167 cagggagacagcgactccgaggaggaggagcaggagattgagtcagaa 39214
>dbj|AK101000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147D18, full insert sequence Length = 3206 Score = 143 bits (72), Expect = 6e-31 Identities = 170/202 (84%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 228 gacagtgacgactctgatactgagagccatcgtgtgattcgctcgttgaaggacaagcgc 287 ||||||||||| |||||| ||| | || |||||| | ||||| |||||||| |||||| Sbjct: 310 gacagtgacgagtctgattctg---gtcagcgtgtggtccgctccttgaaggataagcgc 366 Query: 288 aatgatgagatgaaagctactgccgaccagatgcgcaatgcaatgaagatcaatgactgg 347 ||||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 367 aatgaggagttgaaaattacggttgatcagatgcgcaatgcaatgaagatcaatgactgg 426 Query: 348 cttagcttgcaagagagctttgacaagctcaataagcagcttgagaaggttgttcgtgtc 407 | | || |||||||| || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 427 gtgaatttacaagagagtttcgagaagctcaacaagcagcttgagaaggtggttcgtgtc 486 Query: 408 aatgaatctaccaaaattccaa 429 |||||||| |||| | |||||| Sbjct: 487 aatgaatccaccacagttccaa 508 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagggaggcagtgactctgaggaggaggtggacg 135 ||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| | | | Sbjct: 152 cagccatggcatcccgtttttggggacagggagacagcgactccgaggaggaggagcagg 211 Query: 136 agattgagtcagaa 149 |||||||||||||| Sbjct: 212 agattgagtcagaa 225
>dbj|AK070529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060K11, full insert sequence Length = 3214 Score = 143 bits (72), Expect = 6e-31 Identities = 170/202 (84%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 228 gacagtgacgactctgatactgagagccatcgtgtgattcgctcgttgaaggacaagcgc 287 ||||||||||| |||||| ||| | || |||||| | ||||| |||||||| |||||| Sbjct: 318 gacagtgacgagtctgattctg---gtcagcgtgtggtccgctccttgaaggataagcgc 374 Query: 288 aatgatgagatgaaagctactgccgaccagatgcgcaatgcaatgaagatcaatgactgg 347 ||||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 375 aatgaggagttgaaaattacggttgatcagatgcgcaatgcaatgaagatcaatgactgg 434 Query: 348 cttagcttgcaagagagctttgacaagctcaataagcagcttgagaaggttgttcgtgtc 407 | | || |||||||| || || |||||||| ||||||||||||||||| ||||||||| Sbjct: 435 gtgaatttacaagagagtttcgagaagctcaacaagcagcttgagaaggtggttcgtgtc 494 Query: 408 aatgaatctaccaaaattccaa 429 |||||||| |||| | |||||| Sbjct: 495 aatgaatccaccacagttccaa 516 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 76 cagccatggcatctcgtttttggggacagggaggcagtgactctgaggaggaggtggacg 135 ||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| | | | Sbjct: 160 cagccatggcatcccgtttttggggacagggagacagcgactccgaggaggaggagcagg 219 Query: 136 agattgagtcagaa 149 |||||||||||||| Sbjct: 220 agattgagtcagaa 233
>gb|AY050484.1| Prunus avium putative translation-initiation factor 3 subunit mRNA, complete cds Length = 3114 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| ||||| |||||||||||| |||||||||||||||||||||||||| | |||||| Sbjct: 411 aatgccatgaatatcaatgactgggttagcttgcaagagagctttgacaagataaataag 470 Query: 384 cagcttgagaaggt 397 || ||||||||||| Sbjct: 471 caacttgagaaggt 484
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| || ||||||||||||||| | |||||||||||||||||||||||| |||| || Sbjct: 20530 aatgccatcaagatcaatgactgggtcagcttgcaagagagctttgacaagatcaacaaa 20589 Query: 384 cagcttgagaa 394 ||||| ||||| Sbjct: 20590 cagctcgagaa 20600
>gb|AF106930.1| Medicago truncatula putative translation initiation protein (AM3-1) mRNA, complete cds Length = 3199 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| || ||||||||||||||| | |||||||||||||||||||||||| |||| || Sbjct: 481 aatgctatcaagatcaatgactgggtcagcttgcaagagagctttgacaagatcaacaaa 540 Query: 384 cagcttgagaa 394 ||||| ||||| Sbjct: 541 cagctcgagaa 551
>gb|AC137553.45| Medicago truncatula clone mth2-20p12, complete sequence Length = 134249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 354 ttgcaagagagctttgacaagctcaataagcagcttgaga 393 ||||||||||||||||||||| |||| || |||||||||| Sbjct: 75410 ttgcaagagagctttgacaagatcaacaaacagcttgaga 75449
>ref|NM_115473.2| Arabidopsis thaliana EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3) AT3G56150 (EIF3C) mRNA, complete cds Length = 3033 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| |||||||||||||| ||| | ||| | ||||| | |||||| ||| | || || Sbjct: 338 aatgctatgaagatcaatgattgggtcagccttcaagaaaactttgataaggttaacaaa 397 Query: 384 cagcttgagaaggtt 398 ||||||||||||||| Sbjct: 398 cagcttgagaaggtt 412
>gb|AY064006.1| Arabidopsis thaliana putative eukaryotic translation initiation factor 3 subunit 8 (At3g56150) mRNA, complete cds Length = 3012 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| |||||||||||||| ||| | ||| | ||||| | |||||| ||| | || || Sbjct: 337 aatgctatgaagatcaatgattgggtcagccttcaagaaaactttgataaggttaacaaa 396 Query: 384 cagcttgagaaggtt 398 ||||||||||||||| Sbjct: 397 cagcttgagaaggtt 411
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Minus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| |||||||||||||| ||| | ||| | ||||| | |||||| ||| | || || Sbjct: 39459 aatgctatgaagatcaatgattgggtcagccttcaagaaaactttgataaggttaacaaa 39400 Query: 384 cagcttgagaaggtt 398 ||||||||||||||| Sbjct: 39399 cagcttgagaaggtt 39385
>gb|AF040102.1|AF040102 Arabidopsis thaliana eIF3c mRNA, complete cds Length = 2924 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| |||||||||||||| ||| | ||| | ||||| | |||||| ||| | || || Sbjct: 295 aatgctatgaagatcaatgattgggtcagccttcaagaaaactttgataaggttaacaaa 354 Query: 384 cagcttgagaaggtt 398 ||||||||||||||| Sbjct: 355 cagcttgagaaggtt 369
>gb|BT001961.1| Arabidopsis thaliana clone U10766 putative eukaryotic translation initiation factor 3 subunit 8 (At3g56150) mRNA, complete cds Length = 2734 Score = 46.1 bits (23), Expect = 0.097 Identities = 62/75 (82%) Strand = Plus / Plus Query: 324 aatgcaatgaagatcaatgactggcttagcttgcaagagagctttgacaagctcaataag 383 ||||| |||||||||||||| ||| | ||| | ||||| | |||||| ||| | || || Sbjct: 214 aatgctatgaagatcaatgattgggtcagccttcaagaaaactttgataaggttaacaaa 273 Query: 384 cagcttgagaaggtt 398 ||||||||||||||| Sbjct: 274 cagcttgagaaggtt 288
>ref|NM_025897.1| Mus musculus RIKEN cDNA 1500003O22 gene (1500003O22Rik), mRNA Length = 2293 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 285 ggcagtgactctgaggaggagg 306
>gb|AC119982.6| Mus musculus chromosome 19, clone RP24-498L9, complete sequence Length = 177924 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaacagc 79 |||||||||||||||||||||| Sbjct: 309 aggaaaacaaacaaacaacagc 330
>ref|XM_592299.2| PREDICTED: Bos taurus similar to T07A9.8 (LOC540208), mRNA Length = 1660 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 266 ggcagtgactctgaggaggagg 287
>gb|BC046799.1| Mus musculus RIKEN cDNA 1500003O22 gene, mRNA (cDNA clone MGC:61381 IMAGE:6403599), complete cds Length = 2324 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 276 ggcagtgactctgaggaggagg 297
>gb|BC022923.1| Mus musculus RIKEN cDNA 1500003O22 gene, mRNA (cDNA clone MGC:28703 IMAGE:4242458), complete cds Length = 2331 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 301 ggcagtgactctgaggaggagg 322
>gb|AC121823.3| Mus musculus BAC clone RP23-466I14 from chromosome 7, complete sequence Length = 192248 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 131593 ggcagtgactctgaggaggagg 131614
>ref|XM_810513.1| Trypanosoma cruzi strain CL Brener dynein heavy chain (Tc00.1047053508815.179) partial mRNA Length = 7377 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 376 tcaataagcagcttgagaaggt 397 |||||||||||||||||||||| Sbjct: 2435 tcaataagcagcttgagaaggt 2456
>gb|AC118724.18| Mus musculus, clone RP24-160H20, complete sequence Length = 197860 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaacagc 79 |||||||||||||||||||||| Sbjct: 123699 aggaaaacaaacaaacaacagc 123720
>emb|AL606470.15| Mouse DNA sequence from clone RP23-293J11 on chromosome 11 Contains a Friedreich ataxia protein (Frda) pseudogene, complete sequence Length = 203970 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 aaaacaaacaaacaacagccat 82 |||||||||||||||||||||| Sbjct: 127683 aaaacaaacaaacaacagccat 127662
>gb|AC117470.8| Homo sapiens 3 BAC RP11-529P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190630 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaac 76 |||||||||||||||||||||| Sbjct: 32275 tgaaggaaaacaaacaaacaac 32296
>gb|AC074211.3| Genomic sequence for Mus musculus, clone RP23-92G8, complete sequence Length = 212134 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 ttgaaggaaaacaaacaaacaa 75 |||||||||||||||||||||| Sbjct: 104303 ttgaaggaaaacaaacaaacaa 104324
>dbj|AK154858.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630109N10 product:similar to Hypothetical protein KIAA0409 (Cerebral protein-1) (Fragment) [Homo sapiens], full insert sequence Length = 2353 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 344 ggcagtgactctgaggaggagg 365
>dbj|AK154337.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630021J24 product:similar to Hypothetical protein KIAA0409 (Cerebral protein-1) (Fragment) [Homo sapiens], full insert sequence Length = 2216 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 396 ggcagtgactctgaggaggagg 417
>dbj|AK172224.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830107C24 product:similar to Hypothetical protein KIAA0409 (Cerebral protein-1) (Fragment) [Homo sapiens], full insert sequence Length = 2458 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 242 ggcagtgactctgaggaggagg 263
>dbj|AK172189.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830102L22 product:similar to Hypothetical protein KIAA0409 (Cerebral protein-1) (Fragment) [Homo sapiens], full insert sequence Length = 1631 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 242 ggcagtgactctgaggaggagg 263
>dbj|AK165828.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730001H20 product:similar to Hypothetical protein KIAA0409 (Cerebral protein-1) (Fragment) [Homo sapiens], full insert sequence Length = 2704 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 216 ggcagtgactctgaggaggagg 237
>dbj|AK170257.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630038E20 product:similar to Hypothetical protein KIAA0409 (Cerebral protein-1) (Fragment) [Homo sapiens], full insert sequence Length = 1432 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 221 ggcagtgactctgaggaggagg 242
>dbj|AK013462.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900001K19 product:similar to HYPOTHETICAL 50.7 KDA PROTEIN (CEREBRAL PROTEIN-1) [Homo sapiens], full insert sequence Length = 1668 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 280 ggcagtgactctgaggaggagg 301
>dbj|AK077786.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830461G04 product:similar to HYPOTHETICAL 50.7 KDA PROTEIN (CEREBRAL PROTEIN-1) [Homo sapiens], full insert sequence Length = 2092 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 292 ggcagtgactctgaggaggagg 313
>dbj|AK045361.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230105L16 product:similar to HYPOTHETICAL 50.7 KDA PROTEIN (CEREBRAL PROTEIN-1) [Homo sapiens], full insert sequence Length = 2424 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 221 ggcagtgactctgaggaggagg 242
>dbj|AK005138.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500003O22 product:similar to HYPOTHETICAL 50.7 KDA PROTEIN (CEREBRAL PROTEIN-1) [Homo sapiens], full insert sequence Length = 2293 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 285 ggcagtgactctgaggaggagg 306
>dbj|AK090171.1| Mus musculus 16 days neonate male diencephalon cDNA, RIKEN full-length enriched library, clone:G630010F17 product:unclassifiable, full insert sequence Length = 3144 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaacagc 79 |||||||||||||||||||||| Sbjct: 1202 aggaaaacaaacaaacaacagc 1181
>gb|AC114603.15| Mus musculus chromosome 1, clone RP23-355E19, complete sequence Length = 260698 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 ttgaaggaaaacaaacaaacaa 75 |||||||||||||||||||||| Sbjct: 175927 ttgaaggaaaacaaacaaacaa 175906
>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence Length = 211243 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaacagc 79 |||||||||||||||||||||| Sbjct: 30800 aggaaaacaaacaaacaacagc 30779
>dbj|AK218109.1| Mus musculus cDNA, clone:Y2G0144A14, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000033179, based on BLAT search Length = 398 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 22 ggcagtgactctgaggaggagg 43
>dbj|AK187615.1| Mus musculus cDNA, clone:Y0G0142H07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000033179, based on BLAT search Length = 433 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 70 ggcagtgactctgaggaggagg 91
>emb|CR392352.6| Zebrafish DNA sequence from clone DKEYP-106C3 in linkage group 2, complete sequence Length = 111994 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaactc 31 |||||||||||||||||||||| Sbjct: 43238 ctccgctccgccgacgcaactc 43217
>gb|AC174380.3| Mus musculus BAC clone RP24-196H4 from chromosome 7, complete sequence Length = 173395 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 ggcagtgactctgaggaggagg 129 |||||||||||||||||||||| Sbjct: 163730 ggcagtgactctgaggaggagg 163751
>emb|AL772376.6| Mouse DNA sequence from clone RP23-30F6 on chromosome 4, complete sequence Length = 237323 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 ttgaaggaaaacaaacaaacaa 75 |||||||||||||||||||||| Sbjct: 216127 ttgaaggaaaacaaacaaacaa 216106
>emb|CT010510.7| Mouse DNA sequence from clone RP23-306N20 on chromosome 14, complete sequence Length = 217241 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaacagc 79 |||||||||||||||||||||| Sbjct: 37790 aggaaaacaaacaaacaacagc 37811
>gb|AC153502.3| Mus musculus 10 BAC RP23-407K15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192541 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 54 ttgaaggaaaacaaacaaacaa 75 |||||||||||||||||||||| Sbjct: 87507 ttgaaggaaaacaaacaaacaa 87486
>gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, complete sequence Length = 210466 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 aaatcagaagctggtgatggg 188 ||||||||||||||||||||| Sbjct: 65576 aaatcagaagctggtgatggg 65556
>gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, complete sequence Length = 160219 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 159615 tgaaggaaaacaaacaaacaa 159595
>gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, complete sequence Length = 180335 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 38524 tgaaggaaaacaaacaaacaa 38544
>gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, complete sequence Length = 202661 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 133279 tgaaggaaaacaaacaaacaa 133299
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 aaggaaaacaaacaaacaaca 77 ||||||||||||||||||||| Sbjct: 147965 aaggaaaacaaacaaacaaca 147945
>gb|AC126549.4| Mus musculus BAC clone RP24-326I12 from chromosome 13, complete sequence Length = 189739 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 aaggaaaacaaacaaacaaca 77 ||||||||||||||||||||| Sbjct: 23167 aaggaaaacaaacaaacaaca 23187
>gb|AC127376.3| Mus musculus BAC clone RP23-49A4 from chromosome 6, complete sequence Length = 204528 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 61123 tgaaggaaaacaaacaaacaa 61143
>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203038 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tttttggggacagggaggcag 112 ||||||||||||||||||||| Sbjct: 58212 tttttggggacagggaggcag 58232
>gb|AC104434.2| Homo sapiens chromosome 3 clone RP11-625B23, complete sequence Length = 192758 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 aaggaaaacaaacaaacaaca 77 ||||||||||||||||||||| Sbjct: 89307 aaggaaaacaaacaaacaaca 89287
>gb|AC121943.3| Mus musculus BAC clone RP24-211F3 from chromosome 18, complete sequence Length = 172426 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 44813 tgaaggaaaacaaacaaacaa 44793
>gb|AC126555.3| Mus musculus BAC clone RP23-474A17 from chromosome 13, complete sequence Length = 187704 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 145127 tgaaggaaaacaaacaaacaa 145147
>emb|Z68332.1|HSV775G11 Human DNA sequence from clone GHc-775G11 on chromosome X, complete sequence Length = 26568 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 15841 tgaaggaaaacaaacaaacaa 15821
>emb|AL590069.5| Human DNA sequence from clone RP11-353J17 on chromosome X, complete sequence Length = 158828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 75027 tgaaggaaaacaaacaaacaa 75047
>emb|AL354830.8| Human DNA sequence from clone RP11-193G17 on chromosome 13 Contains the gene for a novel protein similar to prothymosin, complete sequence Length = 152555 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 145533 tgaaggaaaacaaacaaacaa 145553
>emb|AL160414.18| Human DNA sequence from clone RP5-931H19 on chromosome 20 Contains the OXT gene for oxytocin (neurophysin I) and the AVP gene for arginine vasopressin (neurophysin II), complete sequence Length = 35836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 aaggaaaacaaacaaacaaca 77 ||||||||||||||||||||| Sbjct: 9430 aaggaaaacaaacaaacaaca 9410
>emb|AL138914.9| Human DNA sequence from clone RP11-15L1 on chromosome 13 Contains part of a novel gene, complete sequence Length = 153439 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 ggaaaacaaacaaacaacagc 79 ||||||||||||||||||||| Sbjct: 10500 ggaaaacaaacaaacaacagc 10480
>emb|AL096803.8|HSBG304P7 Human DNA sequence from clone GS1-304P7 on chromosome 1q25.1-31.1 Contains a zinc-finger protein pseudogene and a novel pseudogene, complete sequence Length = 129723 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 40459 tgaaggaaaacaaacaaacaa 40439
>emb|AL845328.7| Zebrafish DNA sequence from clone DKEY-16K6 in linkage group 8 Contains the 3' part of a novel gene similar to human and mouse CAPZA (capping protein (actin filament) muscle Z-line, alpha), a novel gene and two CpG islands, complete sequence Length = 196248 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 actccgctccgccgacgcaac 29 ||||||||||||||||||||| Sbjct: 105291 actccgctccgccgacgcaac 105311
>emb|CR450697.3| Zebrafish DNA sequence from clone CH211-284F22 in linkage group 5, complete sequence Length = 143752 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 72374 tgaaggaaaacaaacaaacaa 72354
>gb|AC079595.19| Homo sapiens 12q BAC RP11-337M23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156280 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 70846 tgaaggaaaacaaacaaacaa 70826
>gb|AC153133.4| Mus musculus BAC clone RP24-389O11 from chromosome 13, complete sequence Length = 157007 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 17687 tgaaggaaaacaaacaaacaa 17707
>emb|BX072558.7| Zebrafish DNA sequence from clone DKEY-71K18 in linkage group 8, complete sequence Length = 171364 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 actccgctccgccgacgcaac 29 ||||||||||||||||||||| Sbjct: 170925 actccgctccgccgacgcaac 170945
>gb|AF172082.1|AF172082 Homo sapiens HPC1 locus clone 173P17 genomic sequence Length = 41078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 31075 tgaaggaaaacaaacaaacaa 31055
>gb|AC154862.2| Mus musculus BAC clone RP23-8G7 from 13, complete sequence Length = 205028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 aaggaaaacaaacaaacaaca 77 ||||||||||||||||||||| Sbjct: 44728 aaggaaaacaaacaaacaaca 44708
>gb|AC120132.11| Mus musculus chromosome 6, clone RP23-105D1, complete sequence Length = 203185 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 108890 tgaaggaaaacaaacaaacaa 108910
>gb|AC159239.3| Mus musculus BAC clone RP24-496E14 from chromosome 13, complete sequence Length = 206286 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 115996 tgaaggaaaacaaacaaacaa 115976
>emb|AL645974.7| Mouse DNA sequence from clone RP23-249M13 on chromosome 11, complete sequence Length = 136134 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 tgaaggaaaacaaacaaacaa 75 ||||||||||||||||||||| Sbjct: 29903 tgaaggaaaacaaacaaacaa 29883
>gb|AC123698.15| Mus musculus chromosome 15, clone RP23-331P14, complete sequence Length = 201739 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 38409 gaaggaaaacaaacaaacaa 38390
>gb|AC164587.5| Mus musculus chromosome 5, clone RP24-222H12, complete sequence Length = 176841 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 170641 gaaggaaaacaaacaaacaa 170660
>gb|AC104918.13| Mus musculus chromosome 7, clone RP23-335G1, complete sequence Length = 204099 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 188376 gaaggaaaacaaacaaacaa 188395 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 80361 gaaggaaaacaaacaaacaa 80380
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 161388 gaaggaaaacaaacaaacaa 161369
>gb|AC161502.9| Mus musculus chromosome 1, clone RP23-33E21, complete sequence Length = 215417 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aaacaaacaaacaacagcca 81 |||||||||||||||||||| Sbjct: 34545 aaacaaacaaacaacagcca 34526
>gb|AF130843.1| Mus sp. SNRPN (Snrpn) gene, exon 1 sequence Length = 6752 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 1309 gaaggaaaacaaacaaacaa 1290
>gb|AY016020.1| Gallus gallus alpha globin gene cluster, complete sequence Length = 103190 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 76974 gaaggaaaacaaacaaacaa 76955
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 1721458 gaaggaaaacaaacaaacaa 1721477
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 42515 gaaggaaaacaaacaaacaa 42534
>gb|AC120870.8| Mus musculus chromosome 1, clone RP23-15D1, complete sequence Length = 233914 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 149537 gaaggaaaacaaacaaacaa 149518
>gb|AC122775.15| Mus musculus chromosome 5, clone RP24-191K3, complete sequence Length = 158766 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 28077 gaaggaaaacaaacaaacaa 28096
>gb|AC102110.8| Mus musculus chromosome 1, clone RP23-122M2, complete sequence Length = 213732 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaacaaacaaacaacagcca 81 |||||||||||||||||||| Sbjct: 160114 aaacaaacaaacaacagcca 160133
>gb|BC079523.1| Danio rerio zgc:91993, mRNA (cDNA clone MGC:91993 IMAGE:7043009), complete cds Length = 3495 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 2429 gaaggaaaacaaacaaacaa 2410
>gb|AF116520.1|AF116519S2 Mus musculus periplakin (ppl) gene, exons 2 through 14 Length = 18583 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 agttgaaggaaaacaaacaaacaa 75 |||||||| ||||||||||||||| Sbjct: 7214 agttgaagaaaaacaaacaaacaa 7237
>gb|AC115920.11| Mus musculus chromosome 1, clone RP24-496H1, complete sequence Length = 161759 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 atgaatctaccaaaattcca 428 |||||||||||||||||||| Sbjct: 69805 atgaatctaccaaaattcca 69786
>ref|NM_145011.2| Homo sapiens zinc finger protein 25 (ZNF25), mRNA Length = 3736 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 3116 aggaaaacaaacaaacaaca 3097
>gb|AC136641.3| Mus musculus BAC clone RP23-313G19 from chromosome 7, complete sequence Length = 215208 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aaggaaaacaaacaaacaac 76 |||||||||||||||||||| Sbjct: 123523 aaggaaaacaaacaaacaac 123504
>gb|AY601851.1| Homo sapiens mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli) (MSH2) gene, complete cds Length = 83678 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 agttgaaggaaaacaaacaaacaa 75 ||||||||||||||||| |||||| Sbjct: 28416 agttgaaggaaaacaaaaaaacaa 28393
>gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Hospital Oakland Research Institute) complete sequence Length = 196477 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 40665 aggaaaacaaacaaacaaca 40684
>gb|AC144712.2| Danio rerio clone CH211-4G3, complete sequence Length = 197292 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 80301 ctccgctccgccgacgcaac 80320
>emb|BX294177.35| Zebrafish DNA sequence from clone CH211-281O13 in linkage group 12, complete sequence Length = 136080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 31994 ctccgctccgccgacgcaac 32013
>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence Length = 236365 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 155173 gaaggaaaacaaacaaacaa 155192
>gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome 14, complete sequence Length = 159158 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 63585 gaaggaaaacaaacaaacaa 63566
>ref|XM_534039.2| PREDICTED: Canis familiaris similar to T07A9.8 (LOC476835), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gcagtgactctgaggaggaggtgg 132 ||||||||||||||||||| |||| Sbjct: 626 gcagtgactctgaggaggatgtgg 649
>emb|CR392350.11| Zebrafish DNA sequence from clone DKEY-61N21 in linkage group 5, complete sequence Length = 230648 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 135560 ctccgctccgccgacgcaac 135579
>emb|CR450695.14| Zebrafish DNA sequence from clone DKEYP-72F10 in linkage group 24, complete sequence Length = 187631 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 27838 ctccgctccgccgacgcaac 27819
>emb|CR524823.17| Zebrafish DNA sequence from clone CH211-150A18 in linkage group 16, complete sequence Length = 155638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 145440 ctccgctccgccgacgcaac 145421
>emb|CR848026.11| Zebrafish DNA sequence from clone CH211-188C16 in linkage group 2, complete sequence Length = 138968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 55146 ctccgctccgccgacgcaac 55165
>emb|BX927112.16| Zebrafish DNA sequence from clone DKEY-109M11 in linkage group 1, complete sequence Length = 131888 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 9072 ctccgctccgccgacgcaac 9091
>emb|CR388131.10| Zebrafish DNA sequence from clone DKEY-114G9 in linkage group 1, complete sequence Length = 169443 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 1841 ctccgctccgccgacgcaac 1860
>ref|XM_743251.1| Aspergillus fumigatus Af293 hexose transporter protein (Afu3g00220) partial mRNA Length = 1605 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gacaagcgcaatgatgagat 298 |||||||||||||||||||| Sbjct: 1462 gacaagcgcaatgatgagat 1481
>emb|BX323876.21| Zebrafish DNA sequence from clone CH211-215J19 in linkage group 8, complete sequence Length = 218043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 204380 ctccgctccgccgacgcaac 204399
>emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in linkage group 9, complete sequence Length = 155321 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 110104 ctccgctccgccgacgcaac 110085
>emb|CR626884.13| Zebrafish DNA sequence from clone DKEY-83H2 in linkage group 15, complete sequence Length = 207732 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 108301 ctccgctccgccgacgcaac 108282
>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11, complete sequence Length = 263287 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 119992 ctccgctccgccgacgcaac 119973
>emb|BX927369.10| Zebrafish DNA sequence from clone CH211-134A4 in linkage group 21, complete sequence Length = 184052 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 169456 ctccgctccgccgacgcaac 169437
>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence Length = 220120 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 1358 atctagttgaaggaaaacaa 1339
>emb|CR318600.13| Zebrafish DNA sequence from clone DKEY-37F13 in linkage group 7, complete sequence Length = 257374 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 211438 ctccgctccgccgacgcaac 211457
>emb|CR352287.12| Zebrafish DNA sequence from clone DKEY-158P1 in linkage group 24, complete sequence Length = 153729 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 30876 ctccgctccgccgacgcaac 30895
>emb|CR361557.15| Zebrafish DNA sequence from clone DKEY-78P8 in linkage group 13, complete sequence Length = 150816 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 8649 ctccgctccgccgacgcaac 8630
>emb|BX000523.24| Zebrafish DNA sequence from clone CH211-161N23 in linkage group 7, complete sequence Length = 157480 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 21981 ctccgctccgccgacgcaac 21962
>gb|AC125126.4| Mus musculus BAC clone RP24-282D2 from chromosome 7, complete sequence Length = 175906 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 94050 gaaggaaaacaaacaaacaa 94031 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 49071 gaaggaaaacaaacaaacaa 49090
>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence Length = 233527 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 agttgaaggaaaacaaacaaacaa 75 |||||||| ||||||||||||||| Sbjct: 189966 agttgaagaaaaacaaacaaacaa 189989
>gb|AC132141.3| Mus musculus BAC clone RP23-55P19 from chromosome 15, complete sequence Length = 168586 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 57140 gaaggaaaacaaacaaacaa 57159
>emb|CR354390.16| Zebrafish DNA sequence from clone CH211-90K4 in linkage group 5, complete sequence Length = 141684 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 83149 ctccgctccgccgacgcaac 83130
>emb|CR407592.10| Zebrafish DNA sequence from clone DKEY-166N5, complete sequence Length = 147299 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 64150 ctccgctccgccgacgcaac 64169
>gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 217304 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 agttgaaggaaaacaaacaaacaa 75 ||||||||||||||||| |||||| Sbjct: 33133 agttgaaggaaaacaaaaaaacaa 33110
>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete sequence Length = 181475 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 agttgaaggaaaacaaacaaacaa 75 |||||||| ||||||||||||||| Sbjct: 112561 agttgaagaaaaacaaacaaacaa 112538
>emb|BX899180.11| Zebrafish DNA sequence from clone DKEY-287G19 in linkage group 21, complete sequence Length = 182150 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 146158 ctccgctccgccgacgcaac 146139
>gb|AC123861.4| Mus musculus BAC clone RP23-351E20 from chromosome 2, complete sequence Length = 198454 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 188391 gaaggaaaacaaacaaacaa 188410
>emb|BX571763.22| Zebrafish DNA sequence from clone DKEY-233K3 in linkage group 6, complete sequence Length = 87140 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 57516 ctccgctccgccgacgcaac 57535
>emb|CR388040.5| Zebrafish DNA sequence from clone CH211-170D12 in linkage group 2, complete sequence Length = 53530 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 39185 ctccgctccgccgacgcaac 39166
>emb|CR450739.19| Zebrafish DNA sequence from clone DKEY-175B17 in linkage group 13, complete sequence Length = 180895 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 160831 ctccgctccgccgacgcaac 160850
>gb|AC122912.2| Mus musculus BAC clone RP23-61E5 from 7, complete sequence Length = 255062 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 26878 gaaggaaaacaaacaaacaa 26859
>emb|CR854838.13| Zebrafish DNA sequence from clone CH211-130H14 in linkage group 13, complete sequence Length = 154065 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 33966 ctccgctccgccgacgcaac 33947
>emb|CR388383.9| Zebrafish DNA sequence from clone CH211-179P9 in linkage group 16, complete sequence Length = 145770 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 13838 ctccgctccgccgacgcaac 13857
>gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, complete sequence Length = 140476 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 agagagctttgacaagctcaataa 382 |||||||||||| ||||||||||| Sbjct: 13607 agagagctttgaaaagctcaataa 13584
>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence Length = 182686 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 106986 aggaaaacaaacaaacaaca 106967
>emb|CR678388.17| Zebrafish DNA sequence from clone CH211-125I3 in linkage group 12, complete sequence Length = 79224 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 69928 ctccgctccgccgacgcaac 69909
>gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosome 16, complete sequence Length = 181338 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 agttgaaggaaaacaaacaaacaa 75 |||||||| ||||||||||||||| Sbjct: 160849 agttgaagaaaaacaaacaaacaa 160826
>emb|BX928756.13| Zebrafish DNA sequence from clone CH211-113K9 in linkage group 21, complete sequence Length = 157210 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 109928 ctccgctccgccgacgcaac 109909
>emb|AL928709.36| Zebrafish DNA sequence from clone CH211-127L5 in linkage group 17, complete sequence Length = 166456 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 138960 ctccgctccgccgacgcaac 138941
>emb|CR391907.5| Zebrafish DNA sequence from clone DKEY-31F24 in linkage group 1, complete sequence Length = 117399 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 96986 ctccgctccgccgacgcaac 97005
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 330401 gaaggaaaacaaacaaacaa 330420
>emb|BX548003.29| Zebrafish DNA sequence from clone DKEY-97I5 in linkage group 9, complete sequence Length = 145468 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 103919 ctccgctccgccgacgcaac 103938
>emb|AL645822.24| Zebrafish DNA sequence from clone RP71-1C22 in linkage group 20, complete sequence Length = 181112 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 103561 ctccgctccgccgacgcaac 103580
>emb|BX004991.18| Zebrafish DNA sequence from clone CH211-222F23 in linkage group 9, complete sequence Length = 202138 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 73305 ctccgctccgccgacgcaac 73286
>emb|BX908804.17| Zebrafish DNA sequence from clone CH211-163M16 in linkage group 3, complete sequence Length = 162642 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 91935 ctccgctccgccgacgcaac 91916
>emb|CR450782.5| Zebrafish DNA sequence from clone CH211-245B21 in linkage group 3, complete sequence Length = 99702 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 57212 ctccgctccgccgacgcaac 57231
>emb|CR376789.4| Zebrafish DNA sequence from clone DKEYP-87A2 in linkage group 6, complete sequence Length = 190610 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 5735 ctccgctccgccgacgcaac 5716
>emb|AL451073.17| Human DNA sequence from clone RP11-384A24 on chromosome 6 Contains part of the PTPRK gene for protein tyrosine phosphatase receptor type K (R-PTP-KAPPA), complete sequence Length = 121208 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 94851 gaaggaaaacaaacaaacaa 94870
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 aatctagttgaaggaaaaca 66 |||||||||||||||||||| Sbjct: 4253765 aatctagttgaaggaaaaca 4253784
>emb|AL445186.4| Human DNA sequence from clone RP11-336P12 on chromosome 9 Contains the 3' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3, complete sequence Length = 156124 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tctagttgaaggaaaacaaa 68 |||||||||||||||||||| Sbjct: 7693 tctagttgaaggaaaacaaa 7674
>emb|AL390034.23| Human DNA sequence from clone RP11-375G3 on chromosome 10 Contains the 3' end of the VDAC2 gene for voltage-dependent anion channel 2, the gene for a novel protein (FLJ23841) and a CpG island, complete sequence Length = 38679 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 25169 aggaaaacaaacaaacaaca 25188
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aggttgttcgtgtcaatgaa 413 |||||||||||||||||||| Sbjct: 708458 aggttgttcgtgtcaatgaa 708477
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 19453 atctagttgaaggaaaacaa 19434
>emb|AL161905.15| Human DNA sequence from clone RP11-554O14 on chromosome 6 Contains part of the SUPT3H gene for suppressor of Ty 3 homolog (S. cerevisiae), complete sequence Length = 176968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 166680 gaaggaaaacaaacaaacaa 166661
>emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chromosome 6 Contains a putative novel gene, complete sequence Length = 72139 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ggaaaacaaacaaacaacag 78 |||||||||||||||||||| Sbjct: 30428 ggaaaacaaacaaacaacag 30409
>emb|AL157699.13| Human DNA sequence from clone RP13-55H22 on chromosome Xq12-21.1 Contains the PJA1 gene for praja 1, a high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 119185 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 73064 gaaggaaaacaaacaaacaa 73045
>gb|AC139135.5| Mus musculus chromosome 9, clone RP24-360E17, complete sequence Length = 161297 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 caatgatgagatgaaagcta 306 |||||||||||||||||||| Sbjct: 56641 caatgatgagatgaaagcta 56622
>emb|AL117337.26|HSA393J16 Human DNA sequence from clone RP11-393J16 on chromosome 10 Contains a zinc finger protein pseudogene, the ZNF25 gene for zinc finger protein 25 (KOX 19), the 5' end of the ZNF33A gene for zinc finger protein 33a (KOX 31) and two CpG islands, complete sequence Length = 161452 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 61032 aggaaaacaaacaaacaaca 61051
>gb|AC158212.3| Mus musculus chromosome 7, clone RP24-288P9, complete sequence Length = 161314 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 132274 gaaggaaaacaaacaaacaa 132255
>emb|BX927275.8| Zebrafish DNA sequence from clone DKEY-108P14 in linkage group 23, complete sequence Length = 133912 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 1713 ctccgctccgccgacgcaac 1694
>emb|BX470211.10| Zebrafish DNA sequence from clone DKEY-165A24 in linkage group 7, complete sequence Length = 173552 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 166661 gaaggaaaacaaacaaacaa 166680
>emb|CR394534.6| Zebrafish DNA sequence from clone CH211-276A17 in linkage group 6, complete sequence Length = 153370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 38797 ctccgctccgccgacgcaac 38778
>emb|CR626941.10| Zebrafish DNA sequence from clone DKEY-12J5 in linkage group 16, complete sequence Length = 238554 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 193825 ctccgctccgccgacgcaac 193806
>emb|CR318674.9| Zebrafish DNA sequence from clone DKEY-210I3 in linkage group 23, complete sequence Length = 86079 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 85792 ctccgctccgccgacgcaac 85773
>emb|CR847964.6| Zebrafish DNA sequence from clone CH211-193I17 in linkage group 15, complete sequence Length = 18847 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 2418 gaaggaaaacaaacaaacaa 2437
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 66573 ctccgctccgccgacgcaac 66592
>gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, complete sequence Length = 211081 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 70545 gaaggaaaacaaacaaacaa 70564
>gb|AC157553.10| Mus musculus chromosome 7, clone RP24-68L4, complete sequence Length = 184205 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 150313 gaaggaaaacaaacaaacaa 150294
>emb|AL929176.4| Zebrafish DNA sequence from clone XX-187G17 in linkage group 3 Contains two novel genes similar to hbaa1 (hemoglobin alpha-adult 1), the ba1 gene for ba1 globin, a novel gene similar to ba1, a novel gene for alpha and a novel gene for beta globin, a novel gene, a novel gene similar to human CGTHBA (conserved gene telomeric to alpha globin cluster), a novel gene similar to human MPG (N-methylpurine-DNA glycosylase) and two CpG islands, complete sequence Length = 100902 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 28245 aggaaaacaaacaaacaaca 28264
>emb|AL834125.1|HSM805271 Homo sapiens mRNA; cDNA DKFZp569K1666 (from clone DKFZp569K1666) Length = 3824 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 3128 aggaaaacaaacaaacaaca 3109
>emb|AL831789.6| Zebrafish DNA sequence from clone CH211-207O21 in linkage group 14 Contains the zebrafish fgf24 gene for fibroblast growth factor 24, a novel gene for a RING finger protein, the lbx1h gene for lady bird-like homeobox 1 homolog, (Drosophila) and eight CpG islands, complete sequence Length = 217649 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 198429 ctccgctccgccgacgcaac 198448
>emb|CR854907.6| Zebrafish DNA sequence from clone DKEYP-51H1 in linkage group 15, complete sequence Length = 187961 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 160151 ctccgctccgccgacgcaac 160170
>emb|AJ491696.1|HSA491696 Homo sapiens mRNA for zinc finger protein 25 (ZNF25 gene) Length = 3736 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 3116 aggaaaacaaacaaacaaca 3097
>emb|CR382288.10| Zebrafish DNA sequence from clone CH211-234C14 in linkage group 25, complete sequence Length = 146063 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 39435 ctccgctccgccgacgcaac 39416
>emb|BX284700.13| Zebrafish DNA sequence from clone CH211-269O12 in linkage group 13, complete sequence Length = 183756 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 118868 ctccgctccgccgacgcaac 118849
>emb|BX957335.12| Zebrafish DNA sequence from clone CH211-119A10 in linkage group 11, complete sequence Length = 168444 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 43155 ctccgctccgccgacgcaac 43136
>emb|BX927104.11| Zebrafish DNA sequence from clone CH211-210P22 in linkage group 17, complete sequence Length = 146265 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 112133 ctccgctccgccgacgcaac 112152
>emb|CR932440.7| Zebrafish DNA sequence from clone CH211-247J17 in linkage group 13, complete sequence Length = 78212 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 61576 ctccgctccgccgacgcaac 61595
>emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 in linkage group 5, complete sequence Length = 177385 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 85489 ctccgctccgccgacgcaac 85470
>emb|BX927303.11| Zebrafish DNA sequence from clone CH211-67L13 in linkage group 6, complete sequence Length = 163380 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 133898 ctccgctccgccgacgcaac 133917
>emb|CR356231.12| Zebrafish DNA sequence from clone CH211-232N7, complete sequence Length = 166203 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 75352 ctccgctccgccgacgcaac 75371
>emb|CR855273.7| Zebrafish DNA sequence from clone DKEYP-34E1 in linkage group 24, complete sequence Length = 161081 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 92238 ctccgctccgccgacgcaac 92219
>emb|CR854914.10| Zebrafish DNA sequence from clone DKEY-256M11 in linkage group 5, complete sequence Length = 103750 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 41303 ctccgctccgccgacgcaac 41322
>emb|BX000980.13| Zebrafish DNA sequence from clone CH211-136D9, complete sequence Length = 169191 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 61223 ctccgctccgccgacgcaac 61242
>emb|AL669912.7| Mouse DNA sequence from clone RP23-147K24 on chromosome 11 Contains a serine/threonine kinase 16 (Stk16) pseudogene pseudogene, complete sequence Length = 174954 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 124804 gaaggaaaacaaacaaacaa 124823
>emb|CR381570.12| Zebrafish DNA sequence from clone CH211-74M13 in linkage group 10, complete sequence Length = 151591 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 54380 ctccgctccgccgacgcaac 54399
>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3, complete sequence Length = 182196 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 33746 ctccgctccgccgacgcaac 33727
>emb|BX511252.17| Zebrafish DNA sequence from clone CH211-240E14 in linkage group 16, complete sequence Length = 137574 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 15266 ctccgctccgccgacgcaac 15247
>emb|BX322662.12| Zebrafish DNA sequence from clone CH211-222C18 in linkage group 23, complete sequence Length = 209409 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 147336 ctccgctccgccgacgcaac 147317
>emb|CR559930.6| Zebrafish DNA sequence from clone CH211-186E20 in linkage group 5, complete sequence Length = 151158 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 105652 ctccgctccgccgacgcaac 105671
>emb|BX088708.14| Zebrafish DNA sequence from clone CH211-196B14 in linkage group 3, complete sequence Length = 193659 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 109613 ctccgctccgccgacgcaac 109632 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 103952 ctccgctccgccgacgcaac 103971
>emb|BX004886.8| Zebrafish DNA sequence from clone DKEY-33P4 in linkage group 10, complete sequence Length = 125715 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 33430 ctccgctccgccgacgcaac 33411
>emb|BX470159.8| Zebrafish DNA sequence from clone DKEY-34H12, complete sequence Length = 210284 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 6523 ctccgctccgccgacgcaac 6542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 6336 ctccgctccgccgacgcaac 6355
>emb|BX322537.14| Zebrafish DNA sequence from clone CH211-262H21 in linkage group 23, complete sequence Length = 26459 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 10649 ctccgctccgccgacgcaac 10630
>emb|BX537343.8| Zebrafish DNA sequence from clone CH211-192A19 in linkage group 16, complete sequence Length = 59017 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 46125 ctccgctccgccgacgcaac 46144
>emb|BX324206.6| Zebrafish DNA sequence from clone CH211-66O10 in linkage group 15, complete sequence Length = 164638 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 118297 ctccgctccgccgacgcaac 118278
>emb|BX324201.7| Zebrafish DNA sequence from clone CH211-143G21 in linkage group 6, complete sequence Length = 103664 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 31911 ctccgctccgccgacgcaac 31930
>emb|CR788252.4| Zebrafish DNA sequence from clone DKEY-45J10 in linkage group 13, complete sequence Length = 73390 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 6175 ctccgctccgccgacgcaac 6156
>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7 Contains three CpG islands, complete sequence Length = 110786 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 90455 ctccgctccgccgacgcaac 90474
>emb|AL121926.24|HSDJ85M6 Human DNA sequence from clone RP1-85M6 on chromosome 11p12-13 Contains the CSTF3 gene for cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kD, PIGCP1 pseudogene (phosphatidylinositol glycan, class C), the gene for a novel protein similar to testis-specific protein PBS13, the gene for a novel 58.3 KDA protein, ESTs, STSs, GSSs and CpG islands, complete sequence Length = 139544 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 46984 gaaggaaaacaaacaaacaa 47003
>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3 Length = 247850 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 226823 gaaggaaaacaaacaaacaa 226842
>ref|NM_133423.1| Rattus norvegicus splicing factor YT521-B (Yt521), mRNA Length = 2968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 2538 gaaggaaaacaaacaaacaa 2519
>emb|CR387924.6| Zebrafish DNA sequence from clone CH211-259A19 in linkage group 1, complete sequence Length = 68126 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 2563 ctccgctccgccgacgcaac 2582
>emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 in linkage group 13, complete sequence Length = 138029 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 117578 ctccgctccgccgacgcaac 117559
>emb|CR352237.9| Zebrafish DNA sequence from clone CH211-13I11 in linkage group 11, complete sequence Length = 193648 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 128806 ctccgctccgccgacgcaac 128787
>emb|BX323073.12| Zebrafish DNA sequence from clone DKEY-117J3 in linkage group 21, complete sequence Length = 118703 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 67529 ctccgctccgccgacgcaac 67510
>emb|CR388049.7| Zebrafish DNA sequence from clone CH211-220A11 in linkage group 5, complete sequence Length = 201176 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 188539 ctccgctccgccgacgcaac 188520
>emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 in linkage group 8, complete sequence Length = 108215 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 18130 ctccgctccgccgacgcaac 18111
>emb|CR385085.9| Zebrafish DNA sequence from clone CH211-195A16, complete sequence Length = 211060 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 55438 ctccgctccgccgacgcaac 55457
>emb|BX927201.9| Zebrafish DNA sequence from clone DKEY-12D17 in linkage group 5, complete sequence Length = 101099 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 76596 ctccgctccgccgacgcaac 76615
>emb|BX510651.9| Zebrafish DNA sequence from clone DKEY-232A10 in linkage group 23, complete sequence Length = 74936 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 60029 ctccgctccgccgacgcaac 60048
>emb|CR392040.6| Zebrafish DNA sequence from clone DKEY-157H10 in linkage group 22, complete sequence Length = 108494 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 53919 ctccgctccgccgacgcaac 53938
>emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in linkage group 17, complete sequence Length = 155243 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 152483 ctccgctccgccgacgcaac 152464
>emb|CR396583.6| Zebrafish DNA sequence from clone DKEY-157G20 in linkage group 5, complete sequence Length = 116605 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 8918 ctccgctccgccgacgcaac 8937
>emb|BX072572.8| Zebrafish DNA sequence from clone CH211-119A17, complete sequence Length = 173988 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 82216 ctccgctccgccgacgcaac 82235
>emb|BX510907.15| Zebrafish DNA sequence from clone CH211-234B6 in linkage group 5, complete sequence Length = 154591 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 39954 ctccgctccgccgacgcaac 39973 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 22459 ctccgctccgccgacgcaac 22478
>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence Length = 174556 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 37656 gaaggaaaacaaacaaacaa 37675
>gb|AC068672.11| Homo sapiens chromosome 8, clone RP11-566H8, complete sequence Length = 199583 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 86465 atctagttgaaggaaaacaa 86484
>emb|BX324123.4| Zebrafish DNA sequence from clone DKEY-106L3 in linkage group 10, complete sequence Length = 158061 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 139949 ctccgctccgccgacgcaac 139968
>emb|BX544881.7| Zebrafish DNA sequence from clone DKEY-64F15 in linkage group 14, complete sequence Length = 163842 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 99063 ctccgctccgccgacgcaac 99082
>emb|BX324151.11| Zebrafish DNA sequence from clone CH211-62C19 in linkage group 15, complete sequence Length = 182149 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 9567 ctccgctccgccgacgcaac 9548
>emb|BX539344.4| Zebrafish DNA sequence from clone DKEYP-15D4 in linkage group 23, complete sequence Length = 40832 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aaacaaacaaacaacagcca 81 |||||||||||||||||||| Sbjct: 25060 aaacaaacaaacaacagcca 25041
>emb|BX649590.15| Zebrafish DNA sequence from clone CH211-143I6 in linkage group 9, complete sequence Length = 120653 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 4145 ctccgctccgccgacgcaac 4126
>emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, complete sequence Length = 133968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 45651 ctccgctccgccgacgcaac 45632
>emb|BX571955.15| Zebrafish DNA sequence from clone DKEY-27B3 in linkage group 10, complete sequence Length = 272498 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 58228 ctccgctccgccgacgcaac 58209
>emb|BX510936.5| Zebrafish DNA sequence from clone DKEYP-15C6 in linkage group 21, complete sequence Length = 146287 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 109697 ctccgctccgccgacgcaac 109716
>emb|BX890614.10| Zebrafish DNA sequence from clone DKEY-46N5, complete sequence Length = 115990 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 70601 ctccgctccgccgacgcaac 70582
>emb|BX510302.7| Zebrafish DNA sequence from clone RP71-81M21, complete sequence Length = 155767 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 81256 ctccgctccgccgacgcaac 81237
>emb|BX248092.16| Zebrafish DNA sequence from clone CH211-194K22 in linkage group 12, complete sequence Length = 217001 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 57385 ctccgctccgccgacgcaac 57366
>emb|BX469930.13| Zebrafish DNA sequence from clone CH211-114L13 in linkage group 1, complete sequence Length = 183380 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 131103 ctccgctccgccgacgcaac 131122
>emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chromosome 2, complete sequence Length = 163577 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 agttgaaggaaaacaaacaaacaa 75 |||||| ||||||||||||||||| Sbjct: 147495 agttgatggaaaacaaacaaacaa 147518
>emb|CR600171.1| full-length cDNA clone CS0DM010YB08 of Fetal liver of Homo sapiens (human) Length = 1597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 1008 aggaaaacaaacaaacaaca 989
>dbj|AK056635.1| Homo sapiens cDNA FLJ32073 fis, clone OCBBF1000140 Length = 2539 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 aggaaaacaaacaaacaaca 77 |||||||||||||||||||| Sbjct: 1919 aggaaaacaaacaaacaaca 1900
>ref|NM_001003741.1| Danio rerio zgc:91993 (zgc:91993), mRNA Length = 3495 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 2429 gaaggaaaacaaacaaacaa 2410
>emb|AL110117.3|HSJ474M20 Human DNA sequence from clone RP3-474M20 on chromosome 4, complete sequence Length = 129323 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 98968 atctagttgaaggaaaacaa 98949
>gb|AC006055.1| Homo sapiens 3p22 Contig 7 PAC RPCI4-672N11 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 91885 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 45535 atctagttgaaggaaaacaa 45554
>gb|AC068496.7| Mus musculus chromosome 3 clone RP23-75F13 clone RP23-75F13, complete sequence Length = 136268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 63344 gaaggaaaacaaacaaacaa 63363
>gb|AC091919.3| Homo sapiens chromosome 5 clone RP11-24M12, complete sequence Length = 166358 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 17622 atctagttgaaggaaaacaa 17641
>gb|AC009989.12| Homo sapiens chromosome 10 clone RP11-7P17, complete sequence Length = 175690 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 139645 atctagttgaaggaaaacaa 139626
>gb|AC110799.3| Homo sapiens BAC clone RP11-663P9 from 4, complete sequence Length = 125785 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaacaaacaaacaacagcca 81 |||||||||||||||||||| Sbjct: 71160 aaacaaacaaacaacagcca 71179
>gb|AC026992.12| Homo sapiens chromosome 15, clone RP11-352D13, complete sequence Length = 177902 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 52353 gaaggaaaacaaacaaacaa 52334
>gb|AC103858.2| Homo sapiens chromosome 15, clone RP11-761I4, complete sequence Length = 194996 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 60005 gaaggaaaacaaacaaacaa 59986
>gb|AC096757.3| Homo sapiens BAC clone RP11-543H9 from 4, complete sequence Length = 188464 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 164717 gaaggaaaacaaacaaacaa 164698
>gb|AC093803.3| Homo sapiens BAC clone RP11-319N12 from 4, complete sequence Length = 191903 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 95212 atctagttgaaggaaaacaa 95193
>gb|AC091900.3| Homo sapiens chromosome 5 clone RP11-158K14, complete sequence Length = 180679 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 69078 atctagttgaaggaaaacaa 69059
>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence Length = 178378 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 atctagttgaaggaaaacaa 67 |||||||||||||||||||| Sbjct: 166504 atctagttgaaggaaaacaa 166485
>ref|XM_682482.1| PREDICTED: Danio rerio similar to discs, large homolog-associated protein 4 (LOC559166), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 51 ctccgctccgccgacgcaac 32
>emb|BX294132.11| Zebrafish DNA sequence from clone DKEY-16L23 in linkage group 2, complete sequence Length = 166384 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 51380 ctccgctccgccgacgcaac 51361
>emb|BX666062.6| Zebrafish DNA sequence from clone DKEY-99O18 in linkage group 2, complete sequence Length = 233488 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 175174 ctccgctccgccgacgcaac 175193
>emb|BX293567.21| Zebrafish DNA sequence from clone DKEYP-7A3, complete sequence Length = 82645 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctccgctccgccgacgcaac 29 |||||||||||||||||||| Sbjct: 23739 ctccgctccgccgacgcaac 23720
>emb|BX511025.10| Zebrafish DNA sequence from clone DKEY-262L17 in linkage group 25, complete sequence Length = 179144 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gaaggaaaacaaacaaacaa 75 |||||||||||||||||||| Sbjct: 5591 gaaggaaaacaaacaaacaa 5610 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,361,284 Number of Sequences: 3902068 Number of extensions: 5361284 Number of successful extensions: 729292 Number of sequences better than 10.0: 422 Number of HSP's better than 10.0 without gapping: 422 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 724989 Number of HSP's gapped (non-prelim): 4294 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
