ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
2dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 204 2e-49
3dbj|AK110347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
4ref|XM_468532.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-06
5dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
6dbj|AK101841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
7ref|XM_465556.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
8dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
9dbj|AK066711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
10gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 56 9e-05
11dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
12gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.022
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
15dbj|AK067553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
16gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.022
17gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.022
18emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057... 48 0.022
19ref|XM_475128.1| Oryza sativa (japonica cultivar-group), predic... 44 0.34
20gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.34
21gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.34
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
23ref|XM_450548.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
24ref|XM_470427.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
25gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 42 1.4
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.4
27ref|XM_751078.1| Ustilago maydis 521 hypothetical protein (UM000... 42 1.4
28gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.4
29emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.4
30emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 42 1.4
31emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 42 1.4
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
34gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 42 1.4
35dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
36dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
37dbj|AK100922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
38dbj|AK072412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
39dbj|AK065900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
40gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.4
41gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
42ref|NM_189348.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
43ref|NM_189817.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.3
44ref|XM_473153.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
45ref|NM_213144.1| Danio rerio zgc:66046 (zgc:66046), mRNA 40 5.3
46gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, co... 40 5.3
47ref|XM_873172.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
48ref|XM_873075.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
49ref|XM_872968.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
50ref|XM_872887.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
51ref|XM_872783.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
52ref|XM_872693.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
53ref|XM_872577.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
54ref|XM_872485.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
55ref|XM_872383.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
56ref|XM_592969.2| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
57ref|XM_864105.1| PREDICTED: Bos taurus calpain, large polypeptid... 40 5.3
58gb|BC064649.1| Danio rerio zgc:66046, mRNA (cDNA clone MGC:66046... 40 5.3
59ref|NM_014899.2| Homo sapiens Rho-related BTB domain containing ... 40 5.3
60gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, co... 40 5.3
61ref|XM_817147.1| Leishmania major strain Friedlin RNA-editing co... 40 5.3
62emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.3
63gb|BC047884.1| Homo sapiens Rho-related BTB domain containing 3,... 40 5.3
64gb|BC020231.1| Homo sapiens Rho-related BTB domain containing 3,... 40 5.3
65gb|BC013169.1| Homo sapiens Rho-related BTB domain containing 3,... 40 5.3
66gb|AY437498.1| Trypanosoma cruzi MP81 gene, complete cds 40 5.3
67gb|AY437481.1| Leishmania major MP81 gene, complete cds 40 5.3
68gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, compl... 40 5.3
69gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.3
70gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.3
71gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 5.3
72emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.3
73emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
74emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene... 40 5.3
75emb|CR596551.1| full-length cDNA clone CS0DA010YB13 of Neuroblas... 40 5.3
76gb|AY054120.1|AY054120 Mycobacterium smegmatis cosmid cTra12, pa... 40 5.3
77gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, comp... 40 5.3
78gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's H... 40 5.3
79dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
80dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
81dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
82gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3... 40 5.3
83gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, comp... 40 5.3
84dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
85dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
86dbj|AB183716.1| Leymus chinensis LcBADH2 mRNA for betaine aldehy... 40 5.3
87gb|AF284441.1|AF284441 Macaca fascicularis calpain 2 mRNA, compl... 40 5.3
88dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.3
89dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
90dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
91dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
92dbj|AB020685.1| Homo sapiens mRNA for KIAA0878 protein, partial cds 40 5.3
93dbj|AK107826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
94dbj|AK107710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
95dbj|AK103209.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
96dbj|AK069483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
97emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 5.3
98gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 5.3
99gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.3
100gb|AY610083.1| Sus scrofa clone Clu_6686.scr.msk.p1.Contig1, mRN... 40 5.3
101emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
102gb|BC041337.2| Homo sapiens Rho-related BTB domain containing 3,... 40 5.3
103dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldehyde d... 40 5.3 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Minus

                                                                          
Query: 167    tcctcaaccacctgctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcc 226
              ||||||||||||| |||||||| ||||||| ||||||||||||| |||  || |||||| 
Sbjct: 354124 tcctcaaccacctcctcaccgcctacgccaagtccggccgcctcgcccgagcccgccgcg 354065

                                                                          
Query: 227    tgttcgacgcaatgcccgaccccaacctcttcacccgcaacgcgctgctctcggcgctgg 286
              ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 354064 tgttcgacgaaatgcccgaccccaacctcttcacccgcaacgccctcctctcggcgctcg 354005

                                                                          
Query: 287    cccacgcgcgcctcctccccgacatggaccggctcttcgcgtccatgccccagcgcgacg 346
              ||||| |  | ||| |||| |||||||| || |||||||| || |||||| |||| ||||
Sbjct: 354004 cccactcaaggctcgtcccggacatggagcgcctcttcgcctcgatgcccgagcgggacg 353945

                                                 
Query: 347    cggtgtcctacaacgcgctcatcgcgggcttctcc 381
              | || |||||||||||||||||| | |||||||||
Sbjct: 353944 ccgtctcctacaacgcgctcatcaccggcttctcc 353910



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 181      ctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatg 240
                |||||||| |||| |||| ||| |||||||| || |||||||  ||||||||||||||||
Sbjct: 35700627 ctcaccgcctacggcagggccgcccgcctccaccacgcgcgcgccctgttcgacgcaatg 35700686

                   
Query: 241      ccc 243
                |||
Sbjct: 35700687 ccc 35700689



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 190      tacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatgcc 242
                ||||||| || ||| |||||||||  |||||||||||||||||||| ||||||
Sbjct: 15925395 tacgccaagtgcgggcgcctccccgacgcgcgccgcctgttcgacgaaatgcc 15925343
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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Minus

                                                                         
Query: 167   tcctcaaccacctgctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcc 226
             ||||||||||||| |||||||| ||||||| ||||||||||||| |||  || |||||| 
Sbjct: 82908 tcctcaaccacctcctcaccgcctacgccaagtccggccgcctcgcccgagcccgccgcg 82849

                                                                         
Query: 227   tgttcgacgcaatgcccgaccccaacctcttcacccgcaacgcgctgctctcggcgctgg 286
             ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 82848 tgttcgacgaaatgcccgaccccaacctcttcacccgcaacgccctcctctcggcgctcg 82789

                                                                         
Query: 287   cccacgcgcgcctcctccccgacatggaccggctcttcgcgtccatgccccagcgcgacg 346
             ||||| |  | ||| |||| |||||||| || |||||||| || |||||| |||| ||||
Sbjct: 82788 cccactcaaggctcgtcccggacatggagcgcctcttcgcctcgatgcccgagcgggacg 82729

                                                
Query: 347   cggtgtcctacaacgcgctcatcgcgggcttctcc 381
             | || |||||||||||||||||| | |||||||||
Sbjct: 82728 ccgtctcctacaacgcgctcatcaccggcttctcc 82694
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>dbj|AK110347.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-G08, full
           insert sequence
          Length = 2993

 Score =  204 bits (103), Expect = 2e-49
 Identities = 187/215 (86%)
 Strand = Plus / Plus

                                                                       
Query: 167 tcctcaaccacctgctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcc 226
           ||||||||||||| |||||||| ||||||| ||||||||||||| |||  || |||||| 
Sbjct: 171 tcctcaaccacctcctcaccgcctacgccaagtccggccgcctcgcccgagcccgccgcg 230

                                                                       
Query: 227 tgttcgacgcaatgcccgaccccaacctcttcacccgcaacgcgctgctctcggcgctgg 286
           ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct: 231 tgttcgacgaaatgcccgaccccaacctcttcacccgcaacgccctcctctcggcgctcg 290

                                                                       
Query: 287 cccacgcgcgcctcctccccgacatggaccggctcttcgcgtccatgccccagcgcgacg 346
           ||||| |  | ||| |||| |||||||| || |||||||| || |||||| |||| ||||
Sbjct: 291 cccactcaaggctcgtcccggacatggagcgcctcttcgcctcgatgcccgagcgggacg 350

                                              
Query: 347 cggtgtcctacaacgcgctcatcgcgggcttctcc 381
           | || |||||||||||||||||| | |||||||||
Sbjct: 351 ccgtctcctacaacgcgctcatcaccggcttctcc 385
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>ref|XM_468532.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1911

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 181 ctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatg 240
           |||||||| |||| |||| ||| |||||||| || |||||||  ||||||||||||||||
Sbjct: 507 ctcaccgcctacggcagggccgcccgcctccaccacgcgcgcgccctgttcgacgcaatg 566

              
Query: 241 ccc 243
           |||
Sbjct: 567 ccc 569
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>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 181   ctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatg 240
             |||||||| |||| |||| ||| |||||||| || |||||||  ||||||||||||||||
Sbjct: 61241 ctcaccgcctacggcagggccgcccgcctccaccacgcgcgcgccctgttcgacgcaatg 61300

                
Query: 241   ccc 243
             |||
Sbjct: 61301 ccc 61303
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>dbj|AK101841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069G13, full
           insert sequence
          Length = 1910

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 181 ctcaccgcatacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatg 240
           |||||||| |||| |||| ||| |||||||| || |||||||  ||||||||||||||||
Sbjct: 507 ctcaccgcctacggcagggccgcccgcctccaccacgcgcgcgccctgttcgacgcaatg 566

              
Query: 241 ccc 243
           |||
Sbjct: 567 ccc 569
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>ref|XM_465556.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3324

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 190 tacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatgcc 242
           ||||||| || ||| |||||||||  |||||||||||||||||||| ||||||
Sbjct: 365 tacgccaagtgcgggcgcctccccgacgcgcgccgcctgttcgacgaaatgcc 417
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>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 190   tacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatgcc 242
             ||||||| || ||| |||||||||  |||||||||||||||||||| ||||||
Sbjct: 69070 tacgccaagtgcgggcgcctccccgacgcgcgccgcctgttcgacgaaatgcc 69018
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>dbj|AK066711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075E10, full
           insert sequence
          Length = 3324

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 190 tacgccaggtccggccgcctccccctcgcgcgccgcctgttcgacgcaatgcc 242
           ||||||| || ||| |||||||||  |||||||||||||||||||| ||||||
Sbjct: 365 tacgccaagtgcgggcgcctccccgacgcgcgccgcctgttcgacgaaatgcc 417
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>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 41/44 (93%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                         
Query: 226   ctgttcgacgcaatgcccga-ccccaacctcttcacccgcaacg 268
             |||||||||||||||||| | |||||||||||||||| ||||||
Sbjct: 60812 ctgttcgacgcaatgccccaaccccaacctcttcacctgcaacg 60855
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 41/44 (93%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                            
Query: 226      ctgttcgacgcaatgcccga-ccccaacctcttcacccgcaacg 268
                |||||||||||||||||| | |||||||||||||||| ||||||
Sbjct: 21855378 ctgttcgacgcaatgccccaaccccaacctcttcacctgcaacg 21855421



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 216     cgcgcgccgcctgttcgacgcaatgcccg 244
               ||||||| |||||||||||| ||||||||
Sbjct: 9597143 cgcgcgcggcctgttcgacgaaatgcccg 9597115
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>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0024E08, complete sequence
          Length = 131946

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 216    cgcgcgccgcctgttcgacgcaatgcccgacc 247
              ||||| || |||||||||||||||||||||||
Sbjct: 107608 cgcgccccacctgttcgacgcaatgcccgacc 107639
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 212     ccctcgcgcgccgcctgttcgacgcaatgcccgacc 247
               |||||||||||| ||||||||||| ||||| |||||
Sbjct: 3227815 ccctcgcgcgccacctgttcgacggaatgcgcgacc 3227780
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 216      cgcgcgccgcctgttcgacgcaatgcccgacc 247
                ||||| || |||||||||||||||||||||||
Sbjct: 26084041 cgcgccccacctgttcgacgcaatgcccgacc 26084072



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      cctctcttcctctgccgccgc 83
               |||||||||||||||||||||
Sbjct: 2101375 cctctcttcctctgccgccgc 2101355
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>dbj|AK067553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L03, full
           insert sequence
          Length = 2629

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 212 ccctcgcgcgccgcctgttcgacgcaatgcccgacc 247
           |||||||||||| ||||||||||| ||||| |||||
Sbjct: 383 ccctcgcgcgccacctgttcgacggaatgcgcgacc 418
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 216      cgcgcgccgcctgttcgacgcaatgcccgacc 247
                ||||| || |||||||||||||||||||||||
Sbjct: 26402737 cgcgccccacctgttcgacgcaatgcccgacc 26402768



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 63      cctctcttcctctgccgccgc 83
               |||||||||||||||||||||
Sbjct: 2109156 cctctcttcctctgccgccgc 2109136
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 212     ccctcgcgcgccgcctgttcgacgcaatgcccgacc 247
               |||||||||||| ||||||||||| ||||| |||||
Sbjct: 3227760 ccctcgcgcgccacctgttcgacggaatgcgcgacc 3227725
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>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109081

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 212   ccctcgcgcgccgcctgttcgacgcaatgcccgacc 247
             |||||||||||| ||||||||||| ||||| |||||
Sbjct: 18201 ccctcgcgcgccacctgttcgacggaatgcgcgacc 18166
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>ref|XM_475128.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2010

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 76  gccgccgccggcggccgcgatggggcccgc 105
           ||||||||||||||||||| ||| ||||||
Sbjct: 111 gccgccgccggcggccgcggtggagcccgc 82
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 268     gcgctgctctcggcgctggccc 289
               ||||||||||||||||||||||
Sbjct: 2699513 gcgctgctctcggcgctggccc 2699534
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>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07,
             complete sequence
          Length = 159932

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 76    gccgccgccggcggccgcgatggggcccgc 105
             ||||||||||||||||||| ||| ||||||
Sbjct: 47048 gccgccgccggcggccgcggtggagcccgc 47077
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 76       gccgccgccggcggccgcgatggggcccgc 105
                ||||||||||||||||||| ||| ||||||
Sbjct: 17517243 gccgccgccggcggccgcggtggagcccgc 17517272
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>ref|XM_450548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2268

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 216 cgcgcgccgcctgttcgacgcaatgcccg 244
           ||||||| |||||||||||| ||||||||
Sbjct: 354 cgcgcgcggcctgttcgacgaaatgcccg 382
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>ref|XM_470427.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1230

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 212 ccctcgcgcgccgcctgttcgacgcaatgcccgaccccaac 252
           ||||||| |||||||||||||||| | ||||| ||| ||||
Sbjct: 311 ccctcgcccgccgcctgttcgacgaattgccccaccgcaac 351
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>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
              complete sequence
          Length = 185449

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 63     cctctcttcctctgccgccgc 83
              |||||||||||||||||||||
Sbjct: 172930 cctctcttcctctgccgccgc 172910
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 212      ccctcgcgcgccgcctgttcgacgcaatgcccgaccccaac 252
                ||||||| |||||||||||||||| | ||||| ||| ||||
Sbjct: 35578613 ccctcgcccgccgcctgttcgacgaattgccccaccgcaac 35578573



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      gcggcgctcctctcttcctc 74
               ||||||||||||||||||||
Sbjct: 8402562 gcggcgctcctctcttcctc 8402543
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>ref|XM_751078.1| Ustilago maydis 521 hypothetical protein (UM00024.1) partial mRNA
          Length = 2025

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 213 cctcgcgcgccgcctgttcgacgca 237
           |||||||| ||||||||||||||||
Sbjct: 838 cctcgcgcaccgcctgttcgacgca 814
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 75      tgccgccgccggcggccgcga 95
               |||||||||||||||||||||
Sbjct: 1805752 tgccgccgccggcggccgcga 1805772
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    gcgctgctctcggcgctggcc 288
              |||||||||||||||||||||
Sbjct: 272341 gcgctgctctcggcgctggcc 272321
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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    gcgctgctctcggcgctggcc 288
              |||||||||||||||||||||
Sbjct: 217839 gcgctgctctcggcgctggcc 217819
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 268    gcgctgctctcggcgctggcc 288
              |||||||||||||||||||||
Sbjct: 215486 gcgctgctctcggcgctggcc 215466
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 227     tgttcgacgcaatgcccgacc 247
               |||||||||||||||||||||
Sbjct: 5672282 tgttcgacgcaatgcccgacc 5672262



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 76       gccgccgccggcggccgcga 95
                ||||||||||||||||||||
Sbjct: 27230716 gccgccgccggcggccgcga 27230697
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 212      ccctcgcgcgccgcctgttcgacgcaatgcccgaccccaac 252
                ||||||| |||||||||||||||| | ||||| ||| ||||
Sbjct: 35668685 ccctcgcccgccgcctgttcgacgaattgccccaccgcaac 35668645



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      gcggcgctcctctcttcctc 74
               ||||||||||||||||||||
Sbjct: 8400397 gcggcgctcctctcttcctc 8400378
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
              sequence
          Length = 145290

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 212    ccctcgcgcgccgcctgttcgacgcaatgcccgaccccaac 252
              ||||||| |||||||||||||||| | ||||| ||| ||||
Sbjct: 111576 ccctcgcccgccgcctgttcgacgaattgccccaccgcaac 111536
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>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0021C04
          Length = 162115

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 227   tgttcgacgcaatgcccgacc 247
             |||||||||||||||||||||
Sbjct: 64429 tgttcgacgcaatgcccgacc 64409
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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 216   cgcgcgccgcctgttcgacgcaatgcccg 244
             ||||||| |||||||||||| ||||||||
Sbjct: 37240 cgcgcgcggcctgttcgacgaaatgcccg 37212
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>dbj|AK100922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133O06, full
           insert sequence
          Length = 2261

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 212 ccctcgcgcgccgcctgttcgacgcaatgcccgaccccaac 252
           ||||||| |||||||||||||||| | ||||| ||| ||||
Sbjct: 407 ccctcgcccgccgcctgttcgacgaattgccccaccgcaac 447
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>dbj|AK072412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086C01, full
           insert sequence
          Length = 2306

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  cctctcttcctctgccgccgc 83
           |||||||||||||||||||||
Sbjct: 166 cctctcttcctctgccgccgc 186
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>dbj|AK065900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050D09, full
           insert sequence
          Length = 1171

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 63  cctctcttcctctgccgccgc 83
           |||||||||||||||||||||
Sbjct: 166 cctctcttcctctgccgccgc 186
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 78      cgccgccggcggccgcgatggggcc 102
               ||||||||||||||||| |||||||
Sbjct: 4505967 cgccgccggcggccgcgctggggcc 4505991
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>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0085M22, complete sequence
          Length = 145104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    gcggcgctcctctcttcctc 74
             ||||||||||||||||||||
Sbjct: 26105 gcggcgctcctctcttcctc 26086
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>ref|NM_189348.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2358

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 216 cgcgcgccgcctgttcgacgcaatgccc 243
           ||||||||||||| |||||| |||||||
Sbjct: 183 cgcgcgccgcctgctcgacgaaatgccc 210
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>ref|NM_189817.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  gccgccgccggcggccgcga 95
           ||||||||||||||||||||
Sbjct: 88  gccgccgccggcggccgcga 107
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>ref|XM_473153.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 396

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  ggggcccgcgtccccggcgccgtc 120
           ||||||||||||||||||| ||||
Sbjct: 331 ggggcccgcgtccccggcgtcgtc 354
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>ref|NM_213144.1| Danio rerio zgc:66046 (zgc:66046), mRNA
          Length = 2346

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ctcttcctctgccgccgccg 85
            ||||||||||||||||||||
Sbjct: 1127 ctcttcctctgccgccgccg 1108
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>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence
          Length = 355714

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tgccgccgccggcggccgcg 94
              ||||||||||||||||||||
Sbjct: 181712 tgccgccgccggcggccgcg 181731
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>ref|XM_873172.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 13 (CAPN2), mRNA
          Length = 3064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1285 tcttcctctgccgccgccgg 1266
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>ref|XM_873075.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 12 (CAPN2), mRNA
          Length = 3052

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1285 tcttcctctgccgccgccgg 1266
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>ref|XM_872968.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 11 (CAPN2), mRNA
          Length = 3067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1285 tcttcctctgccgccgccgg 1266
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>ref|XM_872887.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 10 (CAPN2), mRNA
          Length = 3055

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1285 tcttcctctgccgccgccgg 1266
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>ref|XM_872783.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 9 (CAPN2), mRNA
          Length = 3064

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1282 tcttcctctgccgccgccgg 1263
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>ref|XM_872693.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 8 (CAPN2), mRNA
          Length = 3088

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1306 tcttcctctgccgccgccgg 1287
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>ref|XM_872577.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 7 (CAPN2), mRNA
          Length = 2977

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1210 tcttcctctgccgccgccgg 1191
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>ref|XM_872485.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 6 (CAPN2), mRNA
          Length = 3073

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1294 tcttcctctgccgccgccgg 1275
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>ref|XM_872383.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 5 (CAPN2), mRNA
          Length = 3061

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1282 tcttcctctgccgccgccgg 1263
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>ref|XM_592969.2| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 1 (CAPN2), mRNA
          Length = 1887

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1285 tcttcctctgccgccgccgg 1266
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>ref|XM_864105.1| PREDICTED: Bos taurus calpain, large polypeptide L2, transcript
            variant 3 (CAPN2), mRNA
          Length = 3067

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1285 tcttcctctgccgccgccgg 1266
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>gb|BC064649.1| Danio rerio zgc:66046, mRNA (cDNA clone MGC:66046 IMAGE:6794933),
            complete cds
          Length = 2346

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   ctcttcctctgccgccgccg 85
            ||||||||||||||||||||
Sbjct: 1127 ctcttcctctgccgccgccg 1108
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>ref|NM_014899.2| Homo sapiens Rho-related BTB domain containing 3 (RHOBTB3), mRNA
          Length = 4122

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 244 ccggccgcgtccccctcgcgcgcc 221
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>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence
          Length = 196738

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     gcggcgctcctctcttcctc 74
              ||||||||||||||||||||
Sbjct: 116363 gcggcgctcctctcttcctc 116344
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>ref|XM_817147.1| Leishmania major strain Friedlin RNA-editing complex protein MP81
            (LMJ_0126) partial mRNA
          Length = 2970

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   tgccgccgccggcggccgcg 94
            ||||||||||||||||||||
Sbjct: 1507 tgccgccgccggcggccgcg 1488
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 223     cgcctgttcgacgcaatgcccgac 246
               ||||||||||||||| ||||||||
Sbjct: 3676780 cgcctgttcgacgcagtgcccgac 3676803
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>gb|BC047884.1| Homo sapiens Rho-related BTB domain containing 3, mRNA (cDNA clone
           IMAGE:5724018), with apparent retained intron
          Length = 1468

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 437 ccggccgcgtccccctcgcgcgcc 414
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>gb|BC020231.1| Homo sapiens Rho-related BTB domain containing 3, mRNA (cDNA clone
           IMAGE:4905926), containing frame-shift errors
          Length = 1146

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 406 ccggccgcgtccccctcgcgcgcc 383
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>gb|BC013169.1| Homo sapiens Rho-related BTB domain containing 3, mRNA (cDNA clone
           IMAGE:3919018), with apparent retained intron
          Length = 997

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 261 ccggccgcgtccccctcgcgcgcc 238
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>gb|AY437498.1| Trypanosoma cruzi MP81 gene, complete cds
          Length = 2970

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   tgccgccgccggcggccgcg 94
            ||||||||||||||||||||
Sbjct: 1507 tgccgccgccggcggccgcg 1488
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>gb|AY437481.1| Leishmania major MP81 gene, complete cds
          Length = 2970

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   tgccgccgccggcggccgcg 94
            ||||||||||||||||||||
Sbjct: 1507 tgccgccgccggcggccgcg 1488
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>gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, complete sequence
          Length = 165651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 71   cctctgccgccgccggcggccgcgatgg 98
            |||||||| | |||||||||||||||||
Sbjct: 8310 cctctgccccagccggcggccgcgatgg 8283
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 74      ctgccgccgccggcggccgc 93
               ||||||||||||||||||||
Sbjct: 1500407 ctgccgccgccggcggccgc 1500388
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    catgccccagcgcgacgcgg 349
              ||||||||||||||||||||
Sbjct: 479015 catgccccagcgcgacgcgg 479034
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 83      ccggcggccgcgatggggcccgcg 106
               |||||||||| |||||||||||||
Sbjct: 1999375 ccggcggccgggatggggcccgcg 1999352
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     ccgacatggaccggctcttc 324
               ||||||||||||||||||||
Sbjct: 2394145 ccgacatggaccggctcttc 2394126
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>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05,
             complete sequence
          Length = 158601

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 97    ggggcccgcgtccccggcgccgtc 120
             ||||||||||||||||||| ||||
Sbjct: 78576 ggggcccgcgtccccggcgtcgtc 78553
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>emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene locus
          Length = 23407

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   atgccccagcgcgacgcggt 350
             ||||||||||||||||||||
Sbjct: 16248 atgccccagcgcgacgcggt 16229
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>emb|CR596551.1| full-length cDNA clone CS0DA010YB13 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1316

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 408 ccggccgcgtccccctcgcgcgcc 385
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>gb|AY054120.1|AY054120 Mycobacterium smegmatis cosmid cTra12, partial sequence
          Length = 30277

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  tgccgccgccggcggccgcg 94
           ||||||||||||||||||||
Sbjct: 683 tgccgccgccggcggccgcg 664
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>gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, complete sequence
          Length = 126746

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 200   ccggccgcctccccctcgcgcgcc 223
             |||||||| |||||||||||||||
Sbjct: 50243 ccggccgcgtccccctcgcgcgcc 50266
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>gb|AC142129.4| Rattus norvegicus  BAC CH230-183M21 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 215272

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     gcggcgctcctctcttcctc 74
              ||||||||||||||||||||
Sbjct: 190395 gcggcgctcctctcttcctc 190414
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 97       ggggcccgcgtccccggcgccgtc 120
                ||||||||||||||||||| ||||
Sbjct: 25592378 ggggcccgcgtccccggcgtcgtc 25592355



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      ctcttcctctgccgccgccg 85
               ||||||||||||||||||||
Sbjct: 5486026 ctcttcctctgccgccgccg 5486007
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 76       gccgccgccggcggccgcga 95
                ||||||||||||||||||||
Sbjct: 25416058 gccgccgccggcggccgcga 25416077
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 216      cgcgcgccgcctgttcgacgcaatgccc 243
                ||||||||||||| |||||| |||||||
Sbjct: 42289799 cgcgcgccgcctgctcgacgaaatgccc 42289826



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 77       ccgccgccggcggccgcgatgggg 100
                ||||||||||| ||||||||||||
Sbjct: 20726204 ccgccgccggccgccgcgatgggg 20726181
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>gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3, complete sequence
          Length = 160770

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 200   ccggccgcctccccctcgcgcgcc 223
             |||||||| |||||||||||||||
Sbjct: 84489 ccggccgcgtccccctcgcgcgcc 84466
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>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence
          Length = 192347

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 71     cctctgccgccgccggcggccgcgatgg 98
              |||||||| | |||||||||||||||||
Sbjct: 149244 cctctgccccagccggcggccgcgatgg 149217
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0401G10
          Length = 160704

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 216   cgcgcgccgcctgttcgacgcaatgccc 243
             ||||||||||||| |||||| |||||||
Sbjct: 61756 cgcgcgccgcctgctcgacgaaatgccc 61783
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>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0066C06
          Length = 162304

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 77    ccgccgccggcggccgcgatgggg 100
             ||||||||||| ||||||||||||
Sbjct: 69162 ccgccgccggccgccgcgatgggg 69139
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>dbj|AB183716.1| Leymus chinensis LcBADH2 mRNA for betaine aldehyde dehydrogenase,
           complete cds
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 86  gcggccgcgatggggcccgcgtccccggcgccgtcc 121
           ||||||||||  || |||||| ||||||||||||||
Sbjct: 232 gcggccgcgactggtcccgcgcccccggcgccgtcc 267
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>gb|AF284441.1|AF284441 Macaca fascicularis calpain 2 mRNA, complete cds
          Length = 2994

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   tcttcctctgccgccgccgg 86
            ||||||||||||||||||||
Sbjct: 1282 tcttcctctgccgccgccgg 1263
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 92      gcgatggggcccgcgtccccggcg 115
               |||||| |||||||||||||||||
Sbjct: 3117030 gcgatgcggcccgcgtccccggcg 3117007
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>dbj|AP003633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0637D03
          Length = 180159

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    gccgccgccggcggccgcga 95
             ||||||||||||||||||||
Sbjct: 87732 gccgccgccggcggccgcga 87713
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>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1056G08
          Length = 168173

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 76     gccgccgccggcggccgcga 95
              ||||||||||||||||||||
Sbjct: 109148 gccgccgccggcggccgcga 109167
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>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0552F09
          Length = 134659

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    gccgccgccggcggccgcga 95
             ||||||||||||||||||||
Sbjct: 39775 gccgccgccggcggccgcga 39794
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>dbj|AB020685.1| Homo sapiens mRNA for KIAA0878 protein, partial cds
          Length = 4099

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 235 ccggccgcgtccccctcgcgcgcc 212
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>dbj|AK107826.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-G07, full
           insert sequence
          Length = 718

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  ggggcccgcgtccccggcgccgtc 120
           ||||||||||||||||||| ||||
Sbjct: 391 ggggcccgcgtccccggcgtcgtc 414
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>dbj|AK107710.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-D09, full
           insert sequence
          Length = 680

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  gccgccgccggcggccgcga 95
           ||||||||||||||||||||
Sbjct: 219 gccgccgccggcggccgcga 200
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>dbj|AK103209.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122J24, full
           insert sequence
          Length = 642

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  gccgccgccggcggccgcga 95
           ||||||||||||||||||||
Sbjct: 212 gccgccgccggcggccgcga 193
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>dbj|AK069483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020K23, full
            insert sequence
          Length = 3629

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   gcggcgctcctctcttcctc 74
            ||||||||||||||||||||
Sbjct: 2055 gcggcgctcctctcttcctc 2036
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     atgccccagcgcgacgcggt 350
               ||||||||||||||||||||
Sbjct: 1100464 atgccccagcgcgacgcggt 1100445
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 236    caatgcccgaccccaacctcttca 259
              |||||||| |||||||||||||||
Sbjct: 676120 caatgccctaccccaacctcttca 676143
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 75      tgccgccgccggcggccgcgatgg 98
               ||||||||||| ||||||||||||
Sbjct: 3543678 tgccgccgccgccggccgcgatgg 3543701
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>gb|AY610083.1| Sus scrofa clone Clu_6686.scr.msk.p1.Contig1, mRNA sequence
          Length = 1542

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 65 tctcttcctctgccgccgccggcg 88
          |||| |||||||||||||||||||
Sbjct: 50 tctcctcctctgccgccgccggcg 27
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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
             complete sequence
          Length = 150283

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ctcttcctctgccgccgccg 85
             ||||||||||||||||||||
Sbjct: 40656 ctcttcctctgccgccgccg 40637
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>gb|BC041337.2| Homo sapiens Rho-related BTB domain containing 3, mRNA (cDNA clone
           MGC:41820 IMAGE:5285051), complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 200 ccggccgcctccccctcgcgcgcc 223
           |||||||| |||||||||||||||
Sbjct: 244 ccggccgcgtccccctcgcgcgcc 221
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>dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldehyde dehydrogenase,
           complete cds
          Length = 1889

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 86  gcggccgcgatggggcccgcgtccccggcgccgtcc 121
           ||||||||||  || |||||| ||||||||||||||
Sbjct: 237 gcggccgcgactggtcccgcgcccccggcgccgtcc 272


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,384,512
Number of Sequences: 3902068
Number of extensions: 2384512
Number of successful extensions: 67662
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64668
Number of HSP's gapped (non-prelim): 2992
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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