ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39e02 |
|---|---|
| Clone Library Name | barley_pub |
>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III| Length = 776 Score = 32.7 bits (73), Expect = 0.26 Identities = 13/19 (68%), Positives = 17/19 (89%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSV+GFD+GN +C +GVAR Sbjct: 1 MSVLGFDIGNLNCYIGVAR 19
>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG D+G+ SC + VAR Sbjct: 1 MSVVGLDVGSQSCYIAVAR 19
>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG D+G+ SC + VAR Sbjct: 1 MSVVGLDVGSQSCYIAVAR 19
>HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-related 100 kDa| protein E7I) (HSP-E7I) (Heat shock 110 kDa protein) (42 degrees C-HSP) Length = 858 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG D+G+ SC + VAR Sbjct: 1 MSVVGLDVGSQSCYIAVAR 19
>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| (Antigen NY-CO-25) Length = 858 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG D+G+ SC + VAR Sbjct: 1 MSVVGLDVGSQSCYIAVAR 19
>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG D+G+ SC + VAR Sbjct: 1 MSVVGLDVGSQSCYIAVAR 19
>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) (HSP70RY) Length = 840 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/19 (73%), Positives = 14/19 (73%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG DLG SC V VAR Sbjct: 1 MSVVGIDLGFQSCYVAVAR 19
>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) Length = 841 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/19 (73%), Positives = 14/19 (73%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVG DLG SC V VAR Sbjct: 1 MSVVGIDLGFQSCYVAVAR 19
>GGLO_MOUSE (P58710) L-gulonolactone oxidase (EC 1.1.3.8) (LGO)| (L-gulono-gamma-lactone oxidase) (GLO) Length = 439 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = -3 Query: 88 LLELCFW*PPQLMRLVSWQQRFFPW 14 LLE W L RLV W RFF W Sbjct: 254 LLEFLLWTSTYLPRLVGWINRFFFW 278
>LCE2A_HUMAN (Q5TA79) Late cornified envelope protein 2A (Late envelope protein| 9) Length = 106 Score = 28.9 bits (63), Expect = 3.7 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = -2 Query: 239 PPPQCSCHCPDQTPPHSSPT*PFYLPVTAGS 147 PPP+C CP + PP P P P S Sbjct: 12 PPPKCPPKCPPKCPPKCRPQCPAPCPPPVSS 42
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVGFD+GN S + VAR Sbjct: 1 MSVVGFDVGNLSSYIAVAR 19
>MYFB_YEREN (P33407) Chaperone protein myfB precursor| Length = 267 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/20 (55%), Positives = 14/20 (70%) Frame = +2 Query: 44 QPHQLRRLPEAKLQKLLWHR 103 +P QLR+ PE KL+WHR Sbjct: 170 RPDQLRQKPEEMAGKLIWHR 189
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 28.5 bits (62), Expect = 4.8 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 Query: 188 MSVVGFDLGNDSCIVGVAR 244 MSVVGFD+GN S + VAR Sbjct: 1 MSVVGFDVGNLSSYIAVAR 19
>GAG_HTL1C (P14076) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 28.1 bits (61), Expect = 6.3 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Frame = -2 Query: 245 AGPPPQCSCHCPDQT-----PPHSSPT*PFYLPV 159 A PPP S H P + PP+ PT P LPV Sbjct: 99 APPPPSSSTHDPPDSDPQIPPPYVEPTAPQVLPV 132
>MIPR_LYMST (Q25410) Putative molluscan insulin-related peptide(s) receptor| precursor (EC 2.7.10.1) [Contains: Putative molluscan insulin-related peptide(s) receptor alpha chain; Putative molluscan insulin-related peptide(s) receptor beta chain] Length = 1607 Score = 27.7 bits (60), Expect = 8.2 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +3 Query: 45 SLISCGGYQKQSSRSFSGTGNGLLTAGVVRDLDLRTSSD 161 SL CGG Q +SS F+G + L GV R+ L D Sbjct: 1360 SLTPCGGGQFKSSTHFNGGSHTLYDEGVDRETILNGVDD 1398
>ESR2_ANGJA (O13012) Estrogen receptor beta (ER-beta)| Length = 573 Score = 27.7 bits (60), Expect = 8.2 Identities = 12/21 (57%), Positives = 12/21 (57%) Frame = -2 Query: 242 GPPPQCSCHCPDQTPPHSSPT 180 GPPP CS CP PP S T Sbjct: 554 GPPPSCSGECP--CPPKESST 572 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,897,344 Number of Sequences: 219361 Number of extensions: 627821 Number of successful extensions: 1995 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1855 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1987 length of database: 80,573,946 effective HSP length: 57 effective length of database: 68,070,369 effective search space used: 1633688856 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
