ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39d11 |
|---|---|
| Clone Library Name | barley_pub |
>AP4E1_HUMAN (Q9UPM8) AP-4 complex subunit epsilon-1 (Adapter-related protein| complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4) (AP-4 adapter complex epsilon subunit) Length = 1137 Score = 93.2 bits (230), Expect = 3e-19 Identities = 45/93 (48%), Positives = 65/93 (69%) Frame = +1 Query: 196 LVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 LV+ I SK EE+++I +EL LK ++ P + MKE ++RL+Y EMLG+DASFG+ Sbjct: 39 LVRGITALTSKHEEEKLIQQELSSLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGY 98 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 IHA+K+ +L KR GYLAV+LF+ E H+L+ Sbjct: 99 IHAIKLAQQGNLLEKRVGYLAVSLFLHESHELL 131
>AP4E1_MOUSE (Q80V94) AP-4 complex subunit epsilon-1 (Adapter-related protein| complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4) (AP-4 adapter complex epsilon subunit) Length = 1122 Score = 92.4 bits (228), Expect = 5e-19 Identities = 43/93 (46%), Positives = 65/93 (69%) Frame = +1 Query: 196 LVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 L++ + SK EE+++I +EL LK ++ P + MKE ++RL+Y EMLG+DASFG+ Sbjct: 38 LIRGVTALSSKHEEEKLIQQELSSLKATVSAPTTTLKTMKECMVRLIYCEMLGYDASFGY 97 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 IHA+K+ +L KR GYLAV+LF+ E H+L+ Sbjct: 98 IHAIKLAQQGNLLEKRVGYLAVSLFLHESHELL 130
>AP1G2_HUMAN (O75843) AP-1 complex subunit gamma-2 (Adapter-related protein| complex 1 gamma-2 subunit) (Gamma2-adaptin) (Adaptor protein complex AP-1 gamma-2 subunit) (G2ad) Length = 785 Score = 66.2 bits (160), Expect = 4e-11 Identities = 34/97 (35%), Positives = 53/97 (54%) Frame = +1 Query: 178 SKEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGH 357 S + DL++ I A+++A+E +I +E H++ D D R + L +L+Y MLG+ Sbjct: 5 SLKLQDLIEEIRGAKTQAQEREVIQKECAHIRASFRDGDPVHRHRQ--LAKLLYVHMLGY 62 Query: 358 DASFGHIHAVKMTHDESLPLKRTGYLAVALFIDERHD 468 A FG + +K+ KR GYL L +DERHD Sbjct: 63 PAHFGQMECLKLIASSRFTDKRVGYLGAMLLLDERHD 99
>AP1G2_MOUSE (O88512) AP-1 complex subunit gamma-2 (Adapter-related protein| complex 1 gamma-2 subunit) (Gamma2-adaptin) (Adaptor protein complex AP-1 gamma-2 subunit) (G2ad) Length = 791 Score = 61.6 bits (148), Expect = 1e-09 Identities = 32/92 (34%), Positives = 50/92 (54%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFG 372 DL++ I A ++A+E +I +E ++ D D +R + L +L+Y MLG+ A FG Sbjct: 10 DLIEEIRGAETQAQEREVIQKECAQIRASFRDGDPLQRHRQ--LAKLLYVHMLGYPAHFG 67 Query: 373 HIHAVKMTHDESLPLKRTGYLAVALFIDERHD 468 + +K+ KR GYL L +DERHD Sbjct: 68 QMECLKLIASPRFTDKRVGYLGAMLLLDERHD 99
>AP1G1_YEAST (Q12028) AP-1 complex subunit gamma-1 (Gamma(1)-adaptin) (Clathrin| assembly protein large gamma-1 chain) (Clathrin assembly protein complex 1 gamma-1 large chain) Length = 832 Score = 58.2 bits (139), Expect = 1e-08 Identities = 27/93 (29%), Positives = 51/93 (54%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGHI 378 +K + A++ A+E II+++ ++ L D +P K + + +L+Y +LG FG + Sbjct: 9 IKDVRGAKTLADERAIITKQSAKIRTKLRDDHLPHEKRRVNIQKLLYLYILGEKTHFGQV 68 Query: 379 HAVKMTHDESLPLKRTGYLAVALFIDERHDLVS 477 ++ + + KR GYLA L +DE DL++ Sbjct: 69 ESINLIASDDFVDKRLGYLAATLLLDESEDLLT 101
>AP1G1_MOUSE (P22892) AP-1 complex subunit gamma-1 (Adapter-related protein| complex 1 gamma-1 subunit) (Gamma-adaptin) (Adaptor protein complex AP-1 gamma-1 subunit) (Golgi adaptor HA1/AP1 adaptin subunit gamma-1) (Clathrin assembly protein complex 1 gamm Length = 821 Score = 57.0 bits (136), Expect = 2e-08 Identities = 30/93 (32%), Positives = 51/93 (54%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFG 372 +L+++I AR++AEE +I +E ++ + D R + +L+Y MLG+ A FG Sbjct: 8 ELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRN--VAKLLYMHMLGYPAHFG 65 Query: 373 HIHAVKMTHDESLPLKRTGYLAVALFIDERHDL 471 + +K+ + KR GYL L +DER D+ Sbjct: 66 QLECLKLIASQKFTDKRIGYLGAMLLLDERQDV 98
>AP1G1_HUMAN (O43747) AP-1 complex subunit gamma-1 (Adapter-related protein| complex 1 gamma-1 subunit) (Gamma-adaptin) (Adaptor protein complex AP-1 gamma-1 subunit) (Golgi adaptor HA1/AP1 adaptin subunit gamma-1) (Clathrin assembly protein complex 1 gamm Length = 821 Score = 57.0 bits (136), Expect = 2e-08 Identities = 30/93 (32%), Positives = 51/93 (54%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFG 372 +L+++I AR++AEE +I +E ++ + D R + +L+Y MLG+ A FG Sbjct: 8 ELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRN--VAKLLYMHMLGYPAHFG 65 Query: 373 HIHAVKMTHDESLPLKRTGYLAVALFIDERHDL 471 + +K+ + KR GYL L +DER D+ Sbjct: 66 QLECLKLIASQKFTDKRIGYLGAMLLLDERQDV 98
>AP2A_DROME (P91926) AP-2 complex subunit alpha (Alpha-adaptin)| Length = 940 Score = 51.6 bits (122), Expect = 1e-06 Identities = 25/93 (26%), Positives = 51/93 (54%), Gaps = 1/93 (1%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLK-RHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 + I +SK E + I++EL +++ + D + + K+ + +L++ +LGHD FGH Sbjct: 16 ISDIRNCKSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGH 75 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 + AV + K+ GYL +++ ++ DL+ Sbjct: 76 MEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLI 108
>AP2A_SCHPO (Q9C0W7) AP-2 complex subunit alpha (Alpha-adaptin) (Clathrin| assembly protein large alpha chain) (Clathrin assembly protein complex 2 alpha large chain) Length = 878 Score = 51.6 bits (122), Expect = 1e-06 Identities = 25/81 (30%), Positives = 45/81 (55%) Frame = +1 Query: 232 EEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESL 411 +E++ ++ EL ++ + K+ + +L+Y MLG+ +FGH+ A K+ Sbjct: 24 DEEKRVNVELAKIRAKFQSSTLSAYDRKKYVSKLLYIYMLGYPITFGHMEAAKLLSGTKY 83 Query: 412 PLKRTGYLAVALFIDERHDLV 474 K GYLAVAL ++E H+L+ Sbjct: 84 SEKLIGYLAVALLLNENHELM 104
>AP1G1_USTMA (Q99128) AP-1 complex subunit gamma-1 (Gamma(1)-adaptin) (Clathrin| assembly protein large gamma-1 chain) (Clathrin assembly protein complex 1 gamma-1 large chain) (Gamma-ADA) Length = 853 Score = 51.2 bits (121), Expect = 1e-06 Identities = 28/94 (29%), Positives = 49/94 (52%) Frame = +1 Query: 196 LVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 L+K+I ++ A+E +I +E ++ D D R + +L+Y MLG+ A FG Sbjct: 12 LIKAIRSCKTLADERSLIQKESASIRTAFKDEDPFARHNN--IAKLLYIHMLGYPAHFGQ 69 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLVS 477 I +K+ KR GYL + L +DE ++++ Sbjct: 70 IECLKLVATPRFTDKRLGYLGIMLLLDENTEVLT 103
>AP1G1_SCHPO (Q9UU81) AP-1 complex subunit gamma-1 (Gamma(1)-adaptin) (Clathrin| assembly protein large gamma-1 chain) (Clathrin assembly protein complex 1 gamma-1 large chain) Length = 865 Score = 50.4 bits (119), Expect = 2e-06 Identities = 24/93 (25%), Positives = 49/93 (52%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGHI 378 +K++ +++ AEE I +E +++++ R ++ + +L+Y +LG FG I Sbjct: 37 IKAVRASKTTAEEHTTILKESAQIRKNIRQGSNDMRMRRKNVAKLLYLFLLGEPTHFGQI 96 Query: 379 HAVKMTHDESLPLKRTGYLAVALFIDERHDLVS 477 +K+ KR GYLA L +DE ++++ Sbjct: 97 ECLKLLSSSRFMDKRLGYLAAMLLLDENQEVLT 129
>AP2A1_MOUSE (P17426) AP-2 complex subunit alpha-1 (Adapter-related protein| complex 2 alpha-1 subunit) (Alpha-adaptin A) (Adaptor protein complex AP-2 alpha-1 subunit) (Clathrin assembly protein complex 2 alpha-A large chain) (100 kDa coated vesicle prote Length = 977 Score = 49.7 bits (117), Expect = 4e-06 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLK-RHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 + I +SK E + I++EL +++ + D + K+ + +L++ +LGHD FGH Sbjct: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGH 76 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 + AV + K+ GYL +++ ++ +L+ Sbjct: 77 MEAVNLLSSNKYTEKQIGYLFISVLVNSNSELI 109
>AP2A1_HUMAN (O95782) AP-2 complex subunit alpha-1 (Adapter-related protein| complex 2 alpha-1 subunit) (Alpha-adaptin A) (Adaptor protein complex AP-2 alpha-1 subunit) (Clathrin assembly protein complex 2 alpha-A large chain) (100 kDa coated vesicle prote Length = 977 Score = 49.7 bits (117), Expect = 4e-06 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLK-RHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 + I +SK E + I++EL +++ + D + K+ + +L++ +LGHD FGH Sbjct: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGH 76 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 + AV + K+ GYL +++ ++ +L+ Sbjct: 77 MEAVNLLSSNKYTEKQIGYLFISVLVNSNSELI 109
>AP2A2_MOUSE (P17427) AP-2 complex subunit alpha-2 (Adapter-related protein| complex 2 alpha-2 subunit) (Alpha-adaptin C) (Adaptor protein complex AP-2 alpha-2 subunit) (Clathrin assembly protein complex 2 alpha-C large chain) (100 kDa coated vesicle prote Length = 938 Score = 49.3 bits (116), Expect = 5e-06 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLK-RHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 + I +SK E + I++EL +++ + D + K+ + +L++ +LGHD FGH Sbjct: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGH 76 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 + AV + K+ GYL +++ ++ +L+ Sbjct: 77 MEAVNLLSSNRYTEKQIGYLFISVLVNSNSELI 109
>AP2A2_RAT (P18484) AP-2 complex subunit alpha-2 (Adapter-related protein| complex 2 alpha-2 subunit) (Alpha-adaptin C) (Adaptor protein complex AP-2 alpha-2 subunit) (Clathrin assembly protein complex 2 alpha-C large chain) (100 kDa coated vesicle protein Length = 937 Score = 49.3 bits (116), Expect = 5e-06 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLK-RHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 + I +SK E + I++EL +++ + D + K+ + +L++ +LGHD FGH Sbjct: 16 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGH 75 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 + AV + K+ GYL +++ ++ +L+ Sbjct: 76 MEAVNLLSSNRYTEKQIGYLFISVLVNSNSELI 108
>AP2A2_HUMAN (O94973) AP-2 complex subunit alpha-2 (Adapter-related protein| complex 2 alpha-2 subunit) (Alpha-adaptin C) (Adaptor protein complex AP-2 alpha-2 subunit) (Clathrin assembly protein complex 2 alpha-C large chain) (100 kDa coated vesicle prote Length = 939 Score = 49.3 bits (116), Expect = 5e-06 Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLK-RHLADPDVPRRKMKELLLRLVYAEMLGHDASFGH 375 + I +SK E + I++EL +++ + D + K+ + +L++ +LGHD FGH Sbjct: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGH 76 Query: 376 IHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 + AV + K+ GYL +++ ++ +L+ Sbjct: 77 MEAVNLLSSNRYTEKQIGYLFISVLVNSNSELI 109
>AP3D_ASHGO (Q755A1) AP-3 complex subunit delta (Adapter-related protein| complex 3 delta subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 899 Score = 46.2 bits (108), Expect = 4e-05 Identities = 26/98 (26%), Positives = 45/98 (45%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 K DL+K I +S + ++R L + + D + +L+L Y EM G D Sbjct: 24 KSLKDLIKGIRSQQSPEQLHEFLTRVLSECREEVKHADFNMKT--NAVLKLTYLEMYGFD 81 Query: 361 ASFGHIHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 S+ + H +++ KR GYLA + + HD++ Sbjct: 82 MSWANFHVLEVMSSTRFQQKRVGYLAASQSFYKDHDIL 119
>AP3D1_MOUSE (O54774) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) (mBLVR1) Length = 1199 Score = 43.5 bits (101), Expect = 3e-04 Identities = 26/98 (26%), Positives = 49/98 (50%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 K DLV+ I K +E + IS+ ++ +K+ L ++ + + +L Y +MLG+D Sbjct: 16 KNLQDLVRGI--RNHKEDEAKYISQCIDEIKQELKQDNIAVKA--NAVCKLTYLQMLGYD 71 Query: 361 ASFGHIHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 S+ + +++ KR GYLA + E D++ Sbjct: 72 ISWAAFNIIEVMSASKFTFKRVGYLAASQCFHEGTDVI 109
>AP3D1_BOVIN (Q865S1) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 1207 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/98 (26%), Positives = 49/98 (50%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 K DLV+ I K +E + IS+ ++ +K+ L ++ + + +L Y +MLG+D Sbjct: 16 KNLQDLVRGI--RNHKEDEAKYISQCIDEIKQELKQDNIAVKA--NAVCKLTYLQMLGYD 71 Query: 361 ASFGHIHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 S+ + +++ KR GYLA + E D++ Sbjct: 72 ISWAAFNIIEVMSASKFTFKRIGYLAASQCFHEGTDVI 109
>AP3D1_HUMAN (O14617) AP-3 complex subunit delta-1 (Adapter-related protein| complex 3 delta-1 subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 1153 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/98 (26%), Positives = 49/98 (50%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 K DLV+ I K +E + IS+ ++ +K+ L ++ + + +L Y +MLG+D Sbjct: 16 KNLQDLVRGI--RNHKEDEAKYISQCIDEIKQELKQDNIAVKA--NAVCKLTYLQMLGYD 71 Query: 361 ASFGHIHAVKMTHDESLPLKRTGYLAVALFIDERHDLV 474 S+ + +++ KR GYLA + E D++ Sbjct: 72 ISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVI 109
>AP3D_DROME (P54362) AP-3 complex subunit delta (Delta-adaptin) (Garnet| protein) (Delta adaptin subunit of AP-3) Length = 1034 Score = 40.4 bits (93), Expect = 0.002 Identities = 25/88 (28%), Positives = 44/88 (50%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 K DLV+ I +K E + IS +E +K+ L ++ + + +L Y +MLG+D Sbjct: 17 KNLTDLVRGI--RNNKDNEAKYISTCIEEIKQELRQDNISVKC--NAVAKLTYIQMLGYD 72 Query: 361 ASFGHIHAVKMTHDESLPLKRTGYLAVA 444 S+ + +++ KR GYLA + Sbjct: 73 ISWAGFNIIEVMSSSRFTCKRIGYLAAS 100
>AP3D_SCHPO (Q9UTL8) AP-3 complex subunit delta (Adapter-related protein| complex 3 delta subunit) (Delta-adaptin 3) (AP-3 complex delta subunit) (Delta-adaptin) Length = 834 Score = 38.1 bits (87), Expect = 0.012 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKA-EEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGH 357 + +DL+K I RS A +E+ I+ L ++ D + E +L+L Y EMLG Sbjct: 5 RTLIDLIKGI---RSHANDEEAFIATCLLECRKEATSQDADLKS--EAILKLAYLEMLGV 59 Query: 358 DASFGHIHAVKMTHDESLPLKRTGYLA 438 D S+ V++ + K+ GYLA Sbjct: 60 DISWASFQIVEVMSSSKILQKQKGYLA 86
>TSC1_RAT (Q9Z136) Hamartin (Tuberous sclerosis 1 protein homolog)| Length = 1163 Score = 35.8 bits (81), Expect = 0.059 Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 13/106 (12%) Frame = +1 Query: 25 PRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTI-----------GRELAMGSQGG- 168 P PP P+ A H PAS SA+P + + R G E GS+G Sbjct: 397 PAPPCPQDDCA--HGPASQASATPPRKEERADSSRPYLPRQQDVPSDRGLEDLPGSKGSV 454 Query: 169 -WGQSKEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPR 303 +FL + S ++ K +E+ IS+EL + ADP PR Sbjct: 455 TLRNLPDFLGDLASEEDSIEKDKEEAAISKELSEITTAEADPVAPR 500
>MEDB_GIALA (Q08014) Median body protein| Length = 857 Score = 35.0 bits (79), Expect = 0.10 Identities = 34/128 (26%), Positives = 52/128 (40%), Gaps = 6/128 (4%) Frame = +1 Query: 40 PETPVAGDHRPASAPSASPGGRTHAMEQ---LRTIGRELAMGSQGGWGQSKEFLDLVKSI 210 P T + G HR A S G EQ L+ REL S+ +E + L I Sbjct: 100 PATDIDGLHRQLVALKNSLGQNAELYEQRCQLQAELRELQEFSENPAAAVEEIMQLKAQI 159 Query: 211 GEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELL---LRLVYAEMLGHDASFGHIH 381 E + A + +E L+RHLAD + R+ L + + AE+ + H+ Sbjct: 160 DELKYGASNHNALVQEKRDLERHLADLRLSRQDTNSRLPQEIDRLRAEIEDEKRNLPHMD 219 Query: 382 AVKMTHDE 405 ++ DE Sbjct: 220 DLQRQRDE 227
>ENL_HUMAN (Q03111) Protein ENL| Length = 559 Score = 34.3 bits (77), Expect = 0.17 Identities = 24/91 (26%), Positives = 38/91 (41%) Frame = +1 Query: 1 EISTPSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWGQS 180 E ++P+ P PP P P A RPA+A S P + + G A G+ S Sbjct: 264 ESTSPNPGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSK--GSRSAPGTSPRTSSS 321 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLK 273 F D + ++ ++ E+ + S E K Sbjct: 322 SSFSDKKPAKDKSSTRGEKVKAESEPREAKK 352
>LAT_HUMAN (O43561) Linker for activation of T-cells family member 1 (36 kDa| phospho-tyrosine adapter protein) (pp36) (p36-38) Length = 262 Score = 33.9 bits (76), Expect = 0.22 Identities = 20/57 (35%), Positives = 28/57 (49%) Frame = +1 Query: 4 ISTPSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWG 174 +S P LP P SP+ P+ G HR S+ S G +++ G G+Q GWG Sbjct: 73 LSQPDLLPIPRSPQ-PLGGSHRTPSSRRDSDG--ANSVASYENEGASGIRGAQAGWG 126
>K1914_HUMAN (Q8N4X5) Protein KIAA1914| Length = 818 Score = 33.5 bits (75), Expect = 0.29 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%) Frame = +1 Query: 70 PASAPSA----SPGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEE 237 P S P A PG ++LR E+ +G ++ E + EE Sbjct: 625 PPSCPDAVVATPPGASPPVKDRLRVTSAEIKLGKN-------------RTEAEVKRYTEE 671 Query: 238 DRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEML 351 + ++ E ++ HLA +R++KE LL+ E+L Sbjct: 672 KERLEKKKEEIRGHLAQLRKEKRELKETLLKCTDKEVL 709
>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)| Length = 841 Score = 32.3 bits (72), Expect = 0.65 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 9/57 (15%) Frame = +1 Query: 1 EISTPSHLPRPPSP--ETPVAGDHRPASAPSASP-------GGRTHAMEQLRTIGRE 144 E S + +P PPSP +P + + RP+ +PS+SP G A ++L T G E Sbjct: 607 ESSKTAAMPPPPSPCSPSPASRERRPSKSPSSSPRPHDPPSGEPADAEKELATAGDE 663
>RFX2_HUMAN (P48378) DNA-binding protein RFX2| Length = 723 Score = 32.0 bits (71), Expect = 0.85 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Frame = +1 Query: 268 LKRHLADPDVPRRKMKELLLRLVYAEMLGHD------ASFGHIHAVKMTHDE 405 LK+H P P+ + LL Y+ M+ D ASFG H +++ +DE Sbjct: 596 LKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 647
>VGLD_PRVRI (P07645) Protein gp50| Length = 402 Score = 32.0 bits (71), Expect = 0.85 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +1 Query: 25 PRPPSPETPVAGDHRPASAPSASPGG 102 PRPP PETP HRP + P+ P G Sbjct: 310 PRPPRPETP----HRPFAPPAVVPSG 331
>CARB_THEMA (Q9WZ27) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1099 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/70 (25%), Positives = 32/70 (45%) Frame = +1 Query: 94 PGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIISRELEHLK 273 PG Q++++G +A+G +++G+A E D +LEH++ Sbjct: 367 PGADPRLNTQMKSVGEVMAIGRT-----------FKEALGKALRSLELDAAPKLDLEHIR 415 Query: 274 RHLADPDVPR 303 HLA+P R Sbjct: 416 EHLANPTPER 425
>RFX2_MOUSE (P48379) DNA-binding protein RFX2| Length = 692 Score = 31.6 bits (70), Expect = 1.1 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Frame = +1 Query: 268 LKRHLADPDVPRRKMKELLLRLVYAEMLGHD------ASFGHIHAVKMTHDE 405 LK+H P P+ + LL Y+ M+ D ASFG H +++ +DE Sbjct: 566 LKQHSGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDE 617
>GLMS_STRA5 (Q8DZZ7) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 603 Score = 31.2 bits (69), Expect = 1.4 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Frame = +1 Query: 136 GRELAMGSQGGW-GQSKEFLDLVKSIGEARSKAE-EDRIISREL----EHLKRHLADPDV 297 G E+A+ S + Q L K++GEA KAE +D + EL + ++ L++ DV Sbjct: 391 GPEIAVASTKAYTAQVATLAFLAKAVGEANGKAEAKDFDLVHELSIVAQSIEATLSEKDV 450 Query: 298 PRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYL 435 K+++LL+ A +G + +T + +L LK Y+ Sbjct: 451 ISEKVEQLLISTRNAFYIGRGNDY------YVTMEAALKLKEISYI 490
>GLMS_STRA3 (Q8E5P8) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 603 Score = 31.2 bits (69), Expect = 1.4 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 6/106 (5%) Frame = +1 Query: 136 GRELAMGSQGGW-GQSKEFLDLVKSIGEARSKAE-EDRIISREL----EHLKRHLADPDV 297 G E+A+ S + Q L K++GEA KAE +D + EL + ++ L++ DV Sbjct: 391 GPEIAVASTKAYTAQVATLAFLAKAVGEANGKAEAKDFDLVHELSIVAQSIEATLSEKDV 450 Query: 298 PRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYL 435 K+++LL+ A +G + +T + +L LK Y+ Sbjct: 451 ISEKVEQLLISTRNAFYIGRGNDY------YVTMEAALKLKEISYI 490
>K1914_MOUSE (Q5DTU0) Protein KIAA1914| Length = 825 Score = 31.2 bits (69), Expect = 1.4 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Frame = +1 Query: 73 ASAP-SASPGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRII 249 ASAP +ASP + E+LR E+ +G ++ E + EE + Sbjct: 638 ASAPIAASPPVK----EKLRVTSAEIKLGKN-------------RTEAEVKRYTEEKERL 680 Query: 250 SRELEHLKRHLADPDVPRRKMKELLLR 330 R E ++ HLA +R++KE LLR Sbjct: 681 ERSKEEIRGHLAQLRREKRELKETLLR 707
>UL06_HHV2H (P89429) Virion protein UL6| Length = 678 Score = 30.8 bits (68), Expect = 1.9 Identities = 20/51 (39%), Positives = 26/51 (50%) Frame = +1 Query: 22 LPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWG 174 LPRPPSP TP D R +++P G R+ + R+ GR GWG Sbjct: 621 LPRPPSP-TP--ADFRASASPRG--GSRSRTRTRSRSPGRTPRGAPDQGWG 666
>PTER_RAT (Q63530) Phosphotriesterase-related protein (Parathion| hydrolase-related protein) (Resiniferotoxin-binding phosphotriesterase-related protein) Length = 349 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -3 Query: 203 LTRSRNSFDCPHPPCDPIASSRPIV 129 LT + +SF CP PPC AS PI+ Sbjct: 29 LTMAFDSFYCPPPPCQEAASREPIM 53
>PTER_MOUSE (Q60866) Phosphotriesterase-related protein (Parathion| hydrolase-related protein) Length = 349 Score = 30.8 bits (68), Expect = 1.9 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 203 LTRSRNSFDCPHPPCDPIASSRPIV 129 LT + +SF CP PPC + S PI+ Sbjct: 29 LTMTFDSFYCPPPPCHEVTSKEPIM 53
>MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)| (Non-muscle MHC) Length = 2057 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHL-ADPDVPRRKMKELL 324 ++ ++ + E + KAEED +++ELE K+ L D + R++KEL+ Sbjct: 1448 RKLAEVTTQMQEIKKKAEEDADLAKELEEGKKRLNKDIEALERQVKELI 1496
>IRAK1_MOUSE (Q62406) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)| (IRAK-1) (IRAK) (Pelle-like protein kinase) (mPLK) Length = 710 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/51 (37%), Positives = 25/51 (49%) Frame = -3 Query: 209 MDLTRSRNSFDCPHPPCDPIASSRPIVRSCSIACVRPPGDAEGAEAGRWSP 57 + L R+R+ HPP P+V S A RP + G+EAG WSP Sbjct: 90 LQLLRARDIITAWHPPA-------PVVPP-STAAPRPSSISAGSEAGDWSP 132
>FTN_DROME (P35554) Flightin (Muscle protein 27)| Length = 182 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +1 Query: 7 STPSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTI 135 ST + P PPS VA DH+ S + +P A E++ I Sbjct: 21 STQAGTPAPPSKAPSVASDHKADSVVAGTPANEEAAPEEVEEI 63
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 30.8 bits (68), Expect = 1.9 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 14/126 (11%) Frame = +1 Query: 1 EISTPSHLPRPPSPETPV----------AGDHRPASAPSASPGG----RTHAMEQLRTIG 138 E S +P PP P P+ AG+ PAS A G R A+E R++G Sbjct: 16 EAKRASAMPPPPPPPPPISPPALIPAPAAGEEGPASLGQAGAAGCSRSRPPALEPERSLG 75 Query: 139 RELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKE 318 R +G + E L E + EE+ E+ H L +E Sbjct: 76 R-----LRGRFEDYDEEL-------EEEEEMEEEEEEEEEMSHFSLRLESGRADSEDEEE 123 Query: 319 LLLRLV 336 L+ LV Sbjct: 124 RLINLV 129
>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4| (Immediate-early protein IE175) Length = 1415 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +1 Query: 7 STPSHLPRPPSPETPVAGDHRPASAPSASPGGRTH 111 S+P PRP PET + +H S P P TH Sbjct: 114 SSPRSSPRPRGPETSPSNEHIIISPPRNPPSNTTH 148
>CTCF_MOUSE (Q61164) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 736 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 Query: 13 PSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQ 123 P P+PP P PVA PA P GRT+ +Q Sbjct: 637 PEPQPQPPPPPQPVAPAPPPAKKRRGRPPGRTNQPKQ 673
>SPTA1_MOUSE (P08032) Spectrin alpha chain, erythrocyte (Erythroid alpha-spectrin)| Length = 2415 Score = 30.4 bits (67), Expect = 2.5 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Frame = +1 Query: 187 FLD--LVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 FLD L+K G S+ E ++ +E++ +KRHL + M+E L+ + +G Sbjct: 2176 FLDGSLLKETGTLESQLEANKRKQKEIQAMKRHLTKIEDLGDSMEEALILDIKYSTIGLA 2235 Query: 361 ASFGHIHAVKMTHDESL 411 + +H + M +L Sbjct: 2236 QQWDQLHQLGMRMQHNL 2252
>DNAK1_SYNPX (Q7U6R7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 662 Score = 30.4 bits (67), Expect = 2.5 Identities = 18/69 (26%), Positives = 36/69 (52%) Frame = +1 Query: 127 RTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRR 306 RT GR+ ++ QGG +++ ++ + EA ++A+EDR ++E R R Sbjct: 486 RTTGRKQSVSIQGGSNLNED--EVTALLAEAEARADEDRRKRNQIERRNRAQTLVAQAER 543 Query: 307 KMKELLLRL 333 ++++ L L Sbjct: 544 RLRDAALEL 552
>UN119_HUMAN (Q13432) Unc-119 protein homolog (Retinal protein 4) (HRG4)| Length = 240 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = +1 Query: 13 PSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQ 162 PS P P+ P + S P A PG R +++ + IG E +G Q Sbjct: 20 PSGQSVAPIPQPPAESESGSESEPDAGPGPRPGPLQRKQPIGPEDVLGLQ 69
>POLG_HE71M (Q66479) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYA 342 D +K +G+A D + SRE+E L+ HL D K+ + L++L+ A Sbjct: 1015 DYIKGLGDAFGTGFTDAV-SREVEALRNHLIGSDGAVEKILKNLIKLISA 1063
>SYT_PYRKO (Q5JGC8) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 626 Score = 30.0 bits (66), Expect = 3.2 Identities = 19/66 (28%), Positives = 31/66 (46%) Frame = +1 Query: 199 VKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGHI 378 VK I + S+ + +RI HL LA PDV ++++ +L A FG+ Sbjct: 61 VKEIEDVASQIKAERIFVYPFAHLSSELAKPDVALEVLRKIEEKLREKGYEVKRAPFGYY 120 Query: 379 HAVKMT 396 A K++ Sbjct: 121 KAFKLS 126
>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)| (Retroviral insertion site 2 protein) Length = 557 Score = 30.0 bits (66), Expect = 3.2 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = +1 Query: 7 STPSHLPRPPSPETPVAGDHRPAS-APSASPGGRTHAMEQLRTIGRELAMGSQGGWGQSK 183 S PS LP P SP P PA +P A PG RT + +G Q G S+ Sbjct: 74 SCPSSLPEPSSPAEPSP----PADPSPPADPGSPVCPSPVKRTKSTTVYVGQQPGKIPSE 129 Query: 184 EFL-DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKM 312 + + +L + AR + R + ++ + +P P K+ Sbjct: 130 DSVSELQSCLRRARKLGAQARALRARVQ---ENAVEPSTPDAKV 170
>TSC1_HUMAN (Q92574) Hamartin (Tuberous sclerosis 1 protein)| Length = 1164 Score = 30.0 bits (66), Expect = 3.2 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 2/97 (2%) Frame = +1 Query: 19 HLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWGQSK--EFL 192 H+ P + TP + R SA R H + L G E GS+G S FL Sbjct: 408 HISLPQATVTPPRKEERMDSARPCLH--RQHHL--LNDRGSEEPPGSKGSVTLSDLPGFL 463 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPR 303 + S ++ K +E+ ISREL + A+P VPR Sbjct: 464 GDLASEEDSIEKDKEEAAISRELSEITTAEAEPVVPR 500
>MRCKG_HUMAN (Q6DT37) Serine/threonine-protein kinase MRCK gamma (EC 2.7.11.1)| (CDC42-binding protein kinase gamma) (Myotonic dystrophy kinase-related CDC42-binding kinase gamma) (Myotonic dystrophy protein kinase-like alpha) (MRCK gamma) (DMPK-like gamma Length = 1551 Score = 30.0 bits (66), Expect = 3.2 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 11/75 (14%) Frame = +1 Query: 82 PSASPGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFL-------DLVKSIGEARSK---- 228 P+ SPG + ++L + RELA G G Q +E +L++ + EA+ + Sbjct: 477 PAGSPGQDSDLRQELDRLHRELAEGRAGLQAQEQELCRAQGQQEELLQRLQEAQEREAAT 536 Query: 229 AEEDRIISRELEHLK 273 A + R +S +LE + Sbjct: 537 ASQTRALSSQLEEAR 551
>TRPC2_STRCO (Q9Z4X0) Indole-3-glycerol phosphate synthase 2 (EC 4.1.1.48) (IGPS| 2) Length = 258 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = +1 Query: 25 PRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVK 204 PR PS + P+ D+RPA A GG HA+ L + G+G S + L + + Sbjct: 58 PRSPS-KGPLTDDYRPAELARAYQGGGAHAVSVLT---------HEAGFGGSPDHLAVAR 107 Query: 205 SIGE 216 + E Sbjct: 108 AACE 111
>RCCR_ARATH (Q8LDU4) Red chlorophyll catabolite reductase, chloroplast| precursor (EC 1.-.-.-) (RCC reductase) (AtRCCR) (Accelerated cell death protein 2) Length = 319 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/55 (34%), Positives = 28/55 (50%) Frame = +1 Query: 226 KAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHDASFGHIHAVK 390 K EE++I+ E E ++ D RRK E L L + M G + S +HA+K Sbjct: 260 KEEEEKIVVGEEERMELERRDKSF-RRKSIEDDLDLQFPRMFGEEVSSRVVHAIK 313
>PKN1_COREF (Q8FUI5) Probable serine/threonine protein kinase CE0033 (EC| 2.7.11.1) Length = 660 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/50 (40%), Positives = 26/50 (52%) Frame = +1 Query: 4 ISTPSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAM 153 +STP P PP+P P A PA+AP+A G R A Q + R L + Sbjct: 306 LSTP---PPPPTPAMPAATVAAPAAAPTA-VGSRPAAARQPKRGSRALTV 351
>PGCA_CHICK (P07898) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2109 Score = 29.6 bits (65), Expect = 4.2 Identities = 22/60 (36%), Positives = 32/60 (53%) Frame = +1 Query: 1 EISTPSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWGQS 180 E ST + +P S E P +G+H + PSAS G + ++G EL+ G Q G G+S Sbjct: 797 ETSTNASIPEV-SGEFPESGEHPTSGEPSAS--GAPDTSGEPTSVGFELS-GEQSGIGES 852
>GLU2B_BOVIN (Q28034) Glucosidase 2 beta subunit precursor (Glucosidase II beta| subunit) (Protein kinase C substrate, 60.1 kDa protein, heavy chain) (PKCSH) (80K-H protein) (Vacuolar system-associated protein 60) (VASAP-60) Length = 533 Score = 29.6 bits (65), Expect = 4.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +1 Query: 1 EISTPSHLPRPPSPETPVAGDH 66 E+ TP+ P PP PE PV GDH Sbjct: 510 ELMTPAACPEPP-PEYPVEGDH 530
>PROP1_CEBAP (Q3LU40) Homeobox protein prophet of Pit-1 (PROP-1)| (Pituitary-specific homeodomain factor) Length = 226 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 31 PPSPETPVAGDHRPASAPSASPGGRTHAMEQLRT 132 PPS + P AG RP +P GR H+ + RT Sbjct: 41 PPSRKRPGAGVGRPRFSPQGGQRGRPHSRRRHRT 74
>POLG_CX16G (Q65900) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 29.6 bits (65), Expect = 4.2 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYA 342 D +K +G+A D + SRE+E LK HL + K+ + L++L+ A Sbjct: 1015 DYIKGLGDAFGTGFTDAV-SREVEALKNHLIGSEGAVEKILKNLIKLISA 1063
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 29.6 bits (65), Expect = 4.2 Identities = 22/74 (29%), Positives = 27/74 (36%), Gaps = 17/74 (22%) Frame = +1 Query: 7 STPSHLPRPPSPETPVA--------GDHRP---------ASAPSASPGGRTHAMEQLRTI 135 ST S +PRPP P + G H P +S P SPG Q T Sbjct: 476 STTSEVPRPPEPSQGPSTTSSGGGTGPHPPSGTTLRPPTSSTPGGSPGAENSTSHQPATP 535 Query: 136 GRELAMGSQGGWGQ 177 G + A + G Q Sbjct: 536 GGDTAQTPKPGTSQ 549
>NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4| (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3) (NF-AT3) Length = 902 Score = 29.3 bits (64), Expect = 5.5 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +1 Query: 7 STPSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWG 174 + P +PRPP P G H P P+ SPG T + R++ G GG G Sbjct: 56 AAPIGIPRPPPPRP---GMHSPPPRPAPSPG--TWESQPARSVRLGGPGGGAGGAG 106
>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)| Length = 1386 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Frame = +1 Query: 13 PSHLPRPPSPETPVA-----GDHRPASAPSASPGG 102 P HLP PP P PV GD +P P P G Sbjct: 79 PHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPG 113
>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)| (ZAP113) Length = 1951 Score = 29.3 bits (64), Expect = 5.5 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Frame = +1 Query: 13 PSHLPRPPSPETPVA-----GDHRPASAPSASPGG 102 P HLP PP P PV GD +P P P G Sbjct: 78 PHHLPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPG 112
>HUNB_MANSE (Q25514) Protein hunchback (Fragment)| Length = 327 Score = 29.3 bits (64), Expect = 5.5 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 25 PRPPSPETPVAGDHRPASAPSASP 96 P+PP+P P+ G+H P + P P Sbjct: 111 PQPPAPTHPIFGNHFPVNLPYLPP 134
>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding| protein M) (RanBPM) (BPM90) (BPM-L) Length = 729 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +1 Query: 25 PRPPSPETPVAGDHRPASAPSASPG 99 P PP P P A PAS P A PG Sbjct: 83 PPPPPPPPPPASAAAPASGPPAPPG 107
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 10 TPSHLPRPPSPETPVA-GDHRPASAPSASPGG-RTHAMEQLRTI--GRELAM 153 +P LP PP PE P++ +P PS P G RT ++ ++ G L M Sbjct: 379 SPQQLPPPPGPEDPLSPSPGQPLLGPSLGPDGTRTFSLSPFPSLASGERLMM 430
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 13 PSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQG 165 P LP PPSP TP+ P A +A+P L + E+A +QG Sbjct: 1595 PHPLPDPPSPATPLPA--APPPAVAAAPPTLDSTASSLTSYDSEVATLTQG 1643
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 29.3 bits (64), Expect = 5.5 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +1 Query: 10 TPSHLPRP--PSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQ--GGWG 174 +PS++PRP P P +P G RP GGR ++ + G G Q GG G Sbjct: 193 SPSNIPRPAPPRPGSPRIGAPRPGGGQRQGGGGRPGFQQRPGSAGGGAGGGLQRPGGAG 251
>CCHCR_PIG (Q9TSV3) Coiled-coil alpha-helical rod protein 1 (Alpha helical| coiled-coil rod protein) (Fragment) Length = 427 Score = 29.3 bits (64), Expect = 5.5 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 3/110 (2%) Frame = +1 Query: 13 PSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGR-ELAMGSQ--GGWGQSK 183 PSH P P P + P P +E+L R ++ M + G GQ Sbjct: 9 PSHFQARPHPTLPRMAPPWVSDIPLVQPPAHQDVLERLSDNQRPQVTMWEKEVSGKGQEP 68 Query: 184 EFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRL 333 + + +++ +++ +ISR+L+ L+R + V R + +RL Sbjct: 69 GWRGRSVELAGSQALSQQAELISRQLQELRRLEEEVRVLRETSLQQKMRL 118
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 15/63 (23%) Frame = +1 Query: 1 EISTPSHLPR--PPSPETPVAGDHRPASAPSA-------------SPGGRTHAMEQLRTI 135 ++S HLP PP+P TP R A P+A SPGG TH + T Sbjct: 1733 DLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTS 1792 Query: 136 GRE 144 E Sbjct: 1793 SSE 1795
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 28.9 bits (63), Expect = 7.2 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 15/63 (23%) Frame = +1 Query: 1 EISTPSHLPR--PPSPETPVAGDHRPASAPSA-------------SPGGRTHAMEQLRTI 135 ++S HLP PP+P TP R A P+A SPGG TH + T Sbjct: 1704 DLSQVPHLPVLVPPTPGTPATAIDRLAYLPTAPPPFSSRHSSSPLSPGGPTHLAKPTATS 1763 Query: 136 GRE 144 E Sbjct: 1764 SSE 1766
>RASA3_HUMAN (Q14644) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) Length = 834 Score = 28.9 bits (63), Expect = 7.2 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 9/89 (10%) Frame = +1 Query: 181 KEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYAEMLGHD 360 K FLDL+ S G K+ E I+ +E +KR + K+ RL E H Sbjct: 555 KNFLDLISSSGRRDPKSVEQPIVLKEGFMIKRAQGRKRFGMKNFKKRWFRLTNHEFTYHK 614 Query: 361 AS---------FGHIHAVKMTHDESLPLK 420 + +I AV+ +ES +K Sbjct: 615 SKGDQPLYSIPIENILAVEKLEEESFKMK 643
>DNAK1_PROMM (Q7V7N7) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat| shock 70 kDa protein 1) (HSP70-1) Length = 664 Score = 28.9 bits (63), Expect = 7.2 Identities = 20/69 (28%), Positives = 34/69 (49%) Frame = +1 Query: 127 RTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRR 306 RT GR+ ++ QGG ++E +L + EA +KA EDR ++ L R Sbjct: 486 RTTGRKQSVNIQGGSTLNEE--ELQALLAEAEAKAGEDRRRRASIDRRNSALTLVGQAER 543 Query: 307 KMKELLLRL 333 ++++ L L Sbjct: 544 RLRDAALEL 552
>BRPF3_HUMAN (Q9ULD4) Bromodomain and PHD finger-containing protein 3| Length = 1205 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +1 Query: 184 EFLDLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPR 303 E LDLV ++ + ++ R++ RE+ L++ LA P P+ Sbjct: 750 EKLDLVSAMRSSGARTRRVRLLRREINALRQKLAQPPPPQ 789
>SIAT9_MOUSE (O88829) Lactosylceramide alpha-2,3-sialyltransferase (EC 2.4.99.9)| (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase) (Ganglioside GM3 synthase) (ST3Gal V) (Sialyltransferase 9) Length = 359 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +1 Query: 316 ELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYLAVALFI 453 ++++RL A + G+ G+ ++MT+ E PL Y A LF+ Sbjct: 161 DVVIRLNSAPVEGYSEHVGNKTTIRMTYPEGAPLSDVEYYANDLFV 206
>POLG_CX16T (Q9QF31) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYA 342 D +K +G+A D + SRE+E LK HL + K+ + L++L+ A Sbjct: 1015 DYIKGLGDAFGVGFTDAV-SREVEALKNHLIGSEGAVEKILKNLVKLISA 1063
>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 28.9 bits (63), Expect = 7.2 Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 8/106 (7%) Frame = +1 Query: 16 SHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFLD 195 S PR P+ P S +PG ++LRT+G E + +E L Sbjct: 2 SSAPRRPASGADSLHTPEPESLSPGTPGFPEQEEDELRTLGVE----------RFEEILQ 51 Query: 196 LVKSIG---EARSKAEEDRIISRELEH-----LKRHLADPDVPRRK 309 S G RS EED R+ H L HL PD RRK Sbjct: 52 EAGSRGGEEPGRSYGEEDFEYHRQSSHHIHHPLSTHL-PPDARRRK 96
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +1 Query: 7 STPSHLPRPPSPETPVAGDHRPASAPSASP 96 S PS PS P AGD A PSA+P Sbjct: 74 SAPSPAQAGPSQAAPAAGDRAAAPRPSAAP 103
>WHRN_MOUSE (Q80VW5) Whirlin| Length = 906 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +1 Query: 4 ISTPSHLPRPPSPETPVAGDHRPASAPSASP 96 + +P HL PP+ ETP AG P +PS P Sbjct: 683 VQSPPHLKSPPA-ETPGAGACLPPPSPSEHP 712
>CLPB_LISIN (Q929G7) Chaperone clpB| Length = 866 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/36 (47%), Positives = 19/36 (52%) Frame = +1 Query: 208 IGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMK 315 I EA K E+D R LE L+R LAD KMK Sbjct: 426 IEEAALKEEKDPASERRLEMLQRELADYKEEANKMK 461
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +1 Query: 25 PRPPSPETPVAGDHRPASAPSASP 96 PRPP + V G+ PA+APS +P Sbjct: 461 PRPPRRKPRVEGEADPAAAPSETP 484
>HD_HUMAN (P42858) Huntingtin (Huntington disease protein) (HD protein)| Length = 3144 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +1 Query: 13 PSHLPRPPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELA 150 P LP+PP P+ +P P P G A E L +EL+ Sbjct: 50 PPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELS 95
>POLG_HE71B (Q66478) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2192 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 193 DLVKSIGEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRLVYA 342 D +K +G A D + SRE+E LK HL + K+ + L++L+ A Sbjct: 1015 DYIKGLGRAFGTGFTDAV-SREVEALKNHLIGSEGAVEKILKNLVKLISA 1063
>DNAK_MYCTU (P0A5B9) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 624 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = +1 Query: 100 GRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDR 243 G H + + G+E + Q G G SKE D+ + I +A + AEEDR Sbjct: 455 GIVHVTAKDKGTGKENTIRIQEGSGLSKE--DIDRMIKDAEAHAEEDR 500
>DNAK_MYCPA (Q00488) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) (70 kDa antigen) Length = 622 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = +1 Query: 100 GRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDR 243 G H + + G+E + Q G G SKE +D + I +A + AEEDR Sbjct: 455 GIVHVTAKDKGTGKENTIKIQEGSGLSKEEID--RMIKDAEAHAEEDR 500
>DNAK_MYCBO (P0A5C0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 624 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = +1 Query: 100 GRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDR 243 G H + + G+E + Q G G SKE D+ + I +A + AEEDR Sbjct: 455 GIVHVTAKDKGTGKENTIRIQEGSGLSKE--DIDRMIKDAEAHAEEDR 500
>SH3K1_HUMAN (Q96B97) SH3-domain kinase-binding protein 1 (Cbl-interacting| protein of 85 kDa) (Human Src-family kinase-binding protein 1) (HSB-1) (CD2-binding protein 3) (CD2BP3) Length = 665 Score = 28.5 bits (62), Expect = 9.4 Identities = 29/101 (28%), Positives = 42/101 (41%) Frame = +1 Query: 31 PPSPETPVAGDHRPASAPSASPGGRTHAMEQLRTIGRELAMGSQGGWGQSKEFLDLVKSI 210 PP P T AG PA SA+P + L T G S G E ++ Sbjct: 550 PPKPGTMAAGGGGPAPLSSAAP---SPLSSSLGTAGHRANSPSLFG----TEGKPKMEPA 602 Query: 211 GEARSKAEEDRIISRELEHLKRHLADPDVPRRKMKELLLRL 333 +++ EE R REL + + D +R++K+LL L Sbjct: 603 ASSQAAVEELRTQVRELRSIIETMKDQQ--KREIKQLLSEL 641 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,498,706 Number of Sequences: 219361 Number of extensions: 625981 Number of successful extensions: 5383 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 4685 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5340 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
