ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103297.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
2ref|NM_192145.1| Oryza sativa (japonica cultivar-group), predic... 238 1e-59
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
5gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete... 46 0.11
6gb|AE003794.4| Drosophila melanogaster chromosome 2R, section 56... 46 0.11
7gb|AC099023.1| Drosophila melanogaster, chromosome 2R, region 56... 44 0.42
8gb|AC091635.1|AC091635 Drosophila melanogaster, chromosome 2R, r... 44 0.42
9dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
10gb|AE003792.3| Drosophila melanogaster chromosome 2R, section 58... 44 0.42
11gb|AC004290.1|AC004290 Drosophila melanogaster DNA sequence (P1 ... 44 0.42
12ref|NM_194793.1| Oryza sativa (japonica cultivar-group) putative... 42 1.6
13gb|AC140275.3| Mus musculus BAC clone RP24-312F4 from chromosome... 42 1.6
14gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, com... 42 1.6
15emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome 42 1.6
16emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 42 1.6
17gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, c... 42 1.6
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
20dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21emb|Z28636.1|ACRUBIS Acetabularia cliftonii gene for ribulose-1,... 42 1.6
22emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.6
23dbj|AK067458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
24gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
25ref|NM_184799.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
26gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.5
27ref|NM_001004357.1| Mus musculus contactin associated protein-li... 40 6.5
28gb|AC099033.2| Drosophila melanogaster clone BACR14N05, complete... 40 6.5
29gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete... 40 6.5
30gb|AE009266.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 6.5
31gb|AE008345.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 6.5
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.5
33gb|BC064467.1| Mus musculus contactin associated protein-like 2,... 40 6.5
34gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosom... 40 6.5
35gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome... 40 6.5
36gb|BC108392.1| Mus musculus ribonucleoprotein, PTB-binding 1, mR... 40 6.5
37gb|BC058271.1| Mus musculus ribonucleoprotein, PTB-binding 1, mR... 40 6.5
38gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.5
39gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.5
40ref|NM_027911.3| Mus musculus ribonucleoprotein, PTB-binding 1 (... 40 6.5
41gb|AY275472.1| Mus musculus RAVER1 mRNA, complete cds 40 6.5
42gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell... 40 6.5
43gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell ... 40 6.5
44gb|AE005681.1| Caulobacter crescentus CB15 section 7 of 359 of t... 40 6.5
45ref|NM_136727.2| Drosophila melanogaster CAP CG18408-RA, transcr... 40 6.5
46ref|NM_132059.2| Drosophila melanogaster CG4766-RA (CG4766), mRNA 40 6.5
47dbj|AK138596.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 6.5
48gb|AC090354.8| Homo sapiens chromosome 18, clone RP11-735P10, co... 40 6.5
49gb|AF268070.1|AF268070 Ustilago maydis MAP kinase pathway-intera... 40 6.5
50dbj|AK168436.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 40 6.5
51gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47... 40 6.5
52dbj|AK039928.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 6.5
53dbj|AK084478.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.5
54dbj|AK051444.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 6.5
55dbj|AK079191.1| Mus musculus adult male urinary bladder cDNA, RI... 40 6.5
56dbj|AK004919.1| Mus musculus adult male liver cDNA, RIKEN full-l... 40 6.5
57dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
58dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
59gb|AC007083.11|AC007083 Drosophila melanogaster, chromosome 2L, ... 40 6.5
60gb|AC159138.6| Mus musculus BAC RP23-315F23 (Roswell Park Cance... 40 6.5
61gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genom... 40 6.5
62ref|XM_575456.1| PREDICTED: Rattus norvegicus similar to contact... 40 6.5
63dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
64dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
65dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
66dbj|AK129232.1| Mus musculus mRNA for mKIAA0868 protein 40 6.5
67gb|AF130815.1|AF130815 Buchnera aphidicola natural-host Melaphis... 40 6.5
68dbj|AK069458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
69gb|AF145667.1|AF145667 Drosophila melanogaster clone GH11415 BcD... 40 6.5
70gb|AE003632.4| Drosophila melanogaster chromosome 2L, section 41... 40 6.5
71gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20... 40 6.5
72gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51... 40 6.5
73gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 ... 40 6.5
74gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 ... 40 6.5
75gb|BC083865.1| Rattus norvegicus RAVER1 homolog (human), mRNA (c... 40 6.5
76gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.5
77dbj|AB053478.1| Drosophila melanogaster dcp mRNA for DCAPL1, com... 40 6.5
78ref|NM_001013939.1| Rattus norvegicus RAVER1 homolog (human) (Ra... 40 6.5 
>dbj|AK103297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125B04, full
           insert sequence
          Length = 2909

 Score =  244 bits (123), Expect = 2e-61
 Identities = 316/378 (83%), Gaps = 8/378 (2%)
 Strand = Plus / Plus

                                                                       
Query: 99  gccatggccggcggcgacggcgatcgcgcccgtgcgccgaagcggtacaagtcctcggcg 158
           |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 108 gccatggccggcggcgacggcgatcgtgcccgcgcgccgaagcggcacaagtcctcggcg 167

                                                                       
Query: 159 ccatcgaaggcggctctggtggacgagaccgccgagatgaactacgccgacgacttcgat 218
           || |||| | || ||      ||||||||||||||  || ||||| |||| ||| |||||
Sbjct: 168 ccgtcgaggtcgact------gacgagaccgccgaactggactacaccgatgacgtcgat 221

                                                                       
Query: 219 gacgatgcccgcgacggggataatgaggtgaagaagagggacttcaccaagctggagctc 278
           ||||| | |||||| |  ||||  ||||||||||||||||||||||||||||| ||||| 
Sbjct: 222 gacgacgtccgcgatgccgatagggaggtgaagaagagggacttcaccaagctagagctg 281

                                                                       
Query: 279 aagccagatcacgtgaaccggccgccgtgggcgtgcgcagacggccgcatcttcctcgag 338
           ||||| ||||||| |||| ||||||  ||||| ||||| || |||||||||||||| |||
Sbjct: 282 aagccggatcacgcgaacaggccgctctgggcctgcgccgatggccgcatcttcctggag 341

                                                                       
Query: 339 accttctcgcctctttacaagcaggcctacgatttcctcattgccatcgccgaacctgta 398
           || || ||||| || ||||| || |||||||||||| | || || || || || ||||| 
Sbjct: 342 acgttttcgcccctatacaaacaagcctacgatttcttgatcgctattgcggagcctgtt 401

                                                                       
Query: 399 tgcaggccagaatctatgcatgaaatac-atctaacgccacactcattgtatgccgcggt 457
           |||||||||||||| ||||| | | ||| ||||||| || |||||| | ||||| |||||
Sbjct: 402 tgcaggccagaatccatgcacg-agtacaatctaacaccccactcactatatgctgcggt 460

                             
Query: 458 ctcagttggacttgagac 475
           ||||||||| ||||||||
Sbjct: 461 ctcagttgggcttgagac 478
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>ref|NM_192145.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2022

 Score =  238 bits (120), Expect = 1e-59
 Identities = 313/375 (83%), Gaps = 8/375 (2%)
 Strand = Plus / Plus

                                                                       
Query: 102 atggccggcggcgacggcgatcgcgcccgtgcgccgaagcggtacaagtcctcggcgcca 161
           ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| 
Sbjct: 1   atggccggcggcgacggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccg 60

                                                                       
Query: 162 tcgaaggcggctctggtggacgagaccgccgagatgaactacgccgacgacttcgatgac 221
           |||| | ||  |      ||||||||||||||  || ||||| |||| ||| ||||||||
Sbjct: 61  tcgaggtcgatt------gacgagaccgccgaactggactacaccgatgacgtcgatgac 114

                                                                       
Query: 222 gatgcccgcgacggggataatgaggtgaagaagagggacttcaccaagctggagctcaag 281
           || | |||||| |  ||||  ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 115 gacgtccgcgatgccgatagggaggtgaagaagagggacttcaccaagctagagctgaag 174

                                                                       
Query: 282 ccagatcacgtgaaccggccgccgtgggcgtgcgcagacggccgcatcttcctcgagacc 341
           || ||||||| |||| ||||||  ||||| ||||| || |||||||||||||| ||||| 
Sbjct: 175 ccggatcacgcgaacaggccgctctgggcctgcgccgatggccgcatcttcctggagacg 234

                                                                       
Query: 342 ttctcgcctctttacaagcaggcctacgatttcctcattgccatcgccgaacctgtatgc 401
           || ||||| || ||||| || |||||||||||| | || || || || || ||||| |||
Sbjct: 235 ttttcgcccctatacaaacaagcctacgatttcttgatcgctattgcggagcctgtttgc 294

                                                                       
Query: 402 aggccagaatctatgcatgaaatac-atctaacgccacactcattgtatgccgcggtctc 460
           ||||||||||| ||||| | | ||| ||||||| || |||||| | ||||| ||||||||
Sbjct: 295 aggccagaatccatgcacg-agtacaatctaacaccccactcactatatgctgcggtctc 353

                          
Query: 461 agttggacttgagac 475
           |||||| ||||||||
Sbjct: 354 agttgggcttgagac 368
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  127 bits (64), Expect = 4e-26
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                            
Query: 243      gaggtgaagaagagggacttcaccaagctggagctcaagccagatcacgtgaaccggccg 302
                ||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||| |||||
Sbjct: 28539319 gaggtgaagaagagggacttcaccaagctagagctgaagccggatcacgcgaacaggccg 28539378

                                                                            
Query: 303      ccgtgggcgtgcgcagacggccgcatcttcctcgagaccttctcgcctctttacaagcag 362
                |  ||||| ||||| || |||||||||||||| ||||| || ||||| || ||||| || 
Sbjct: 28539379 ctctgggcctgcgccgatggccgcatcttcctggagacgttttcgcccctatacaaacaa 28539438

                            
Query: 363      gcctacgatttc 374
                ||||||||||||
Sbjct: 28539439 gcctacgatttc 28539450



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 117      ggcgatcgcgcccgtgcgccgaagcggtacaagtcctcggcgccatcga 165
                |||||||||||||| |||||||||||| |||||||||||||||| ||||
Sbjct: 28539072 ggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccgtcga 28539120



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 67/78 (85%), Gaps = 2/78 (2%)
 Strand = Plus / Plus

                                                                            
Query: 399      tgcaggccagaatctatgcatgaaataca-tctaacgccacactcattgtatgccgcggt 457
                |||||||||||||| ||||| ||  |||| |||||| || |||||| | ||||| |||||
Sbjct: 28540836 tgcaggccagaatccatgcacgag-tacaatctaacaccccactcactatatgctgcggt 28540894

                                  
Query: 458      ctcagttggacttgagac 475
                ||||||||| ||||||||
Sbjct: 28540895 ctcagttgggcttgagac 28540912



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 99       gccatggccggcggcgacggcg 120
                ||||||||||||||||||||||
Sbjct: 28667983 gccatggccggcggcgacggcg 28667962



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 99       gccatggccggcggcgacgg 118
                ||||||||||||||||||||
Sbjct: 28538948 gccatggccggcggcgacgg 28538967
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>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C09
          Length = 170226

 Score =  127 bits (64), Expect = 4e-26
 Identities = 115/132 (87%)
 Strand = Plus / Plus

                                                                         
Query: 243   gaggtgaagaagagggacttcaccaagctggagctcaagccagatcacgtgaaccggccg 302
             ||||||||||||||||||||||||||||| ||||| ||||| ||||||| |||| |||||
Sbjct: 65758 gaggtgaagaagagggacttcaccaagctagagctgaagccggatcacgcgaacaggccg 65817

                                                                         
Query: 303   ccgtgggcgtgcgcagacggccgcatcttcctcgagaccttctcgcctctttacaagcag 362
             |  ||||| ||||| || |||||||||||||| ||||| || ||||| || ||||| || 
Sbjct: 65818 ctctgggcctgcgccgatggccgcatcttcctggagacgttttcgcccctatacaaacaa 65877

                         
Query: 363   gcctacgatttc 374
             ||||||||||||
Sbjct: 65878 gcctacgatttc 65889



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 117   ggcgatcgcgcccgtgcgccgaagcggtacaagtcctcggcgccatcga 165
             |||||||||||||| |||||||||||| |||||||||||||||| ||||
Sbjct: 65511 ggcgatcgcgcccgcgcgccgaagcggcacaagtcctcggcgccgtcga 65559



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 67/78 (85%), Gaps = 2/78 (2%)
 Strand = Plus / Plus

                                                                         
Query: 399   tgcaggccagaatctatgcatgaaataca-tctaacgccacactcattgtatgccgcggt 457
             |||||||||||||| ||||| ||  |||| |||||| || |||||| | ||||| |||||
Sbjct: 67275 tgcaggccagaatccatgcacgag-tacaatctaacaccccactcactatatgctgcggt 67333

                               
Query: 458   ctcagttggacttgagac 475
             ||||||||| ||||||||
Sbjct: 67334 ctcagttgggcttgagac 67351



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gccatggccggcggcgacgg 118
             ||||||||||||||||||||
Sbjct: 65387 gccatggccggcggcgacgg 65406
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>gb|AC009738.3| Drosophila melanogaster clone BACR02J10, complete sequence
          Length = 158491

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 40   ctcgactcgactcaactcgattc 62
            |||||||||||||||||||||||
Sbjct: 4112 ctcgactcgactcaactcgattc 4134
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>gb|AE003794.4| Drosophila melanogaster chromosome 2R, section 56 of 73 of the complete
             sequence
          Length = 281805

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 40    ctcgactcgactcaactcgattc 62
             |||||||||||||||||||||||
Sbjct: 12080 ctcgactcgactcaactcgattc 12058
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>gb|AC099023.1| Drosophila melanogaster, chromosome 2R, region 56X-57A, BAC clone
             BACR48L22, complete sequence
          Length = 180814

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 38    tcctcgactcgactcaactcga 59
             ||||||||||||||||||||||
Sbjct: 11026 tcctcgactcgactcaactcga 11005



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 11009 ctcgactcgactcaactcga 10990
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>gb|AC091635.1|AC091635 Drosophila melanogaster, chromosome 2R, region 56F-57A, BAC clone
             BACR10H12, complete sequence
          Length = 166168

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 38    tcctcgactcgactcaactcga 59
             ||||||||||||||||||||||
Sbjct: 22555 tcctcgactcgactcaactcga 22576



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 22572 ctcgactcgactcaactcga 22591
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>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431H09
          Length = 166886

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 99    gccatggccggcggcgacggcg 120
             ||||||||||||||||||||||
Sbjct: 51057 gccatggccggcggcgacggcg 51036
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>gb|AE003792.3| Drosophila melanogaster chromosome 2R, section 58 of 73 of the complete
             sequence
          Length = 256764

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 38    tcctcgactcgactcaactcga 59
             ||||||||||||||||||||||
Sbjct: 77484 tcctcgactcgactcaactcga 77505



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 77501 ctcgactcgactcaactcga 77520
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>gb|AC004290.1|AC004290 Drosophila melanogaster DNA sequence (P1 DS04106 (D172)), complete
             sequence
          Length = 84653

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 38    tcctcgactcgactcaactcga 59
             ||||||||||||||||||||||
Sbjct: 56573 tcctcgactcgactcaactcga 56594



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 56590 ctcgactcgactcaactcga 56609
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>ref|NM_194793.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450
            (OSJNBa0029P06.11), mRNA
          Length = 1593

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  catggccggcggcgacggcga 121
            |||||||||||||||||||||
Sbjct: 1326 catggccggcggcgacggcga 1346
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>gb|AC140275.3| Mus musculus BAC clone RP24-312F4 from chromosome 19, complete sequence
          Length = 173022

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 279    aagccagatcacgtgaaccgg 299
              |||||||||||||||||||||
Sbjct: 170133 aagccagatcacgtgaaccgg 170113
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>gb|AC116128.15| Mus musculus chromosome 19, clone RP23-95H3, complete sequence
          Length = 228363

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   aagccagatcacgtgaaccgg 299
             |||||||||||||||||||||
Sbjct: 61918 aagccagatcacgtgaaccgg 61938
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>emb|Z18946.1|MLCGA Mycobacteriophage L5 complete genome
          Length = 52297

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 183   gagaccgccgagatgaactac 203
             |||||||||||||||||||||
Sbjct: 45662 gagaccgccgagatgaactac 45642
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 105   gccggcggcgacggcgatcgcgcccgtgc 133
             ||||||||||||| ||| |||||||||||
Sbjct: 14330 gccggcggcgacgacgagcgcgcccgtgc 14358
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>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence
          Length = 151533

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 101   catggccggcggcgacggcga 121
             |||||||||||||||||||||
Sbjct: 90081 catggccggcggcgacggcga 90061
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     catggccggcggcgacggcga 121
               |||||||||||||||||||||
Sbjct: 2433349 catggccggcggcgacggcga 2433329
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 95      cccagccatggccggcggcgacggcgatc 123
               |||||| ||||||| ||||||||||||||
Sbjct: 5648511 cccagcgatggccgacggcgacggcgatc 5648483
to top
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 95    cccagccatggccggcggcgacggcgatc 123
             |||||| ||||||| ||||||||||||||
Sbjct: 76247 cccagcgatggccgacggcgacggcgatc 76219
to top
>emb|Z28636.1|ACRUBIS Acetabularia cliftonii gene for ribulose-1,5-bisphosphate
            carboxylase/oxygenase small subunit, clone plACrbcS1
          Length = 2230

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   gactcgactcaactcgattcg 63
            |||||||||||||||||||||
Sbjct: 1293 gactcgactcaactcgattcg 1313
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 99      gccatggccggcggcgacggc 119
               |||||||||||||||||||||
Sbjct: 3312109 gccatggccggcggcgacggc 3312089
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>dbj|AK067458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107H17, full
            insert sequence
          Length = 1792

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  catggccggcggcgacggcga 121
            |||||||||||||||||||||
Sbjct: 1386 catggccggcggcgacggcga 1406
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 101     catggccggcggcgacggcga 121
               |||||||||||||||||||||
Sbjct: 2433300 catggccggcggcgacggcga 2433280
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>ref|NM_184799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 927

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 cctcggcgccatcgaaggcg 170
           ||||||||||||||||||||
Sbjct: 379 cctcggcgccatcgaaggcg 360
to top
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     gcgatcgcgcccgtgcgccg 137
               ||||||||||||||||||||
Sbjct: 3394126 gcgatcgcgcccgtgcgccg 3394145
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>ref|NM_001004357.1| Mus musculus contactin associated protein-like 2 (Cntnap2),
            transcript variant 1, mRNA
          Length = 6957

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  gacttcaccaagctggagctcaag 281
            ||||||| ||||||||||||||||
Sbjct: 2732 gacttcatcaagctggagctcaag 2755
to top
>gb|AC099033.2| Drosophila melanogaster clone BACR14N05, complete sequence
          Length = 170313

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 40    ctcgactcgactcaactcgattcg 63
             ||||||||||||| ||||||||||
Sbjct: 67147 ctcgactcgactcgactcgattcg 67170
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>gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete sequence
          Length = 166178

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ctcgactcgactcaactcgattcg 63
             ||||||||||||| ||||||||||
Sbjct: 13444 ctcgactcgactcgactcgattcg 13421
to top
>gb|AE009266.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 36 of
            187 of the complete sequence
          Length = 12013

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  gccgagatgaactacgccga 208
            ||||||||||||||||||||
Sbjct: 9296 gccgagatgaactacgccga 9277
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>gb|AE008345.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 149 of
            187 of the complete sequence
          Length = 11578

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  gccgagatgaactacgccga 208
            ||||||||||||||||||||
Sbjct: 9331 gccgagatgaactacgccga 9350
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 151      cctcggcgccatcgaaggcg 170
                ||||||||||||||||||||
Sbjct: 22066484 cctcggcgccatcgaaggcg 22066503
to top
>gb|BC064467.1| Mus musculus contactin associated protein-like 2, mRNA (cDNA clone
            IMAGE:6825764), partial cds
          Length = 3935

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  gacttcaccaagctggagctcaag 281
            ||||||| ||||||||||||||||
Sbjct: 1650 gacttcatcaagctggagctcaag 1673
to top
>gb|AC125401.4| Mus musculus BAC clone RP24-538H16 from chromosome 6, complete sequence
          Length = 130679

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 258    gacttcaccaagctggagctcaag 281
              ||||||| ||||||||||||||||
Sbjct: 125576 gacttcatcaagctggagctcaag 125599
to top
>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence
          Length = 215370

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    tcgaaggcggctctggtgga 181
              ||||||||||||||||||||
Sbjct: 180531 tcgaaggcggctctggtgga 180512
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>gb|BC108392.1| Mus musculus ribonucleoprotein, PTB-binding 1, mRNA (cDNA clone
           MGC:118403 IMAGE:6393833), complete cds
          Length = 3511

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 367 tcgaaggcggctctggtgga 348
to top
>gb|BC058271.1| Mus musculus ribonucleoprotein, PTB-binding 1, mRNA (cDNA clone
           IMAGE:6490833), with apparent retained intron
          Length = 3465

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 368 tcgaaggcggctctggtgga 349
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     ccggcggcgacggcgatcgc 125
               ||||||||||||||||||||
Sbjct: 2713513 ccggcggcgacggcgatcgc 2713494
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     atggccggcggcgacggcga 121
               ||||||||||||||||||||
Sbjct: 1753140 atggccggcggcgacggcga 1753159
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>ref|NM_027911.3| Mus musculus ribonucleoprotein, PTB-binding 1 (Raver1), mRNA
          Length = 3465

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 368 tcgaaggcggctctggtgga 349
to top
>gb|AY275472.1| Mus musculus RAVER1 mRNA, complete cds
          Length = 2972

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 367 tcgaaggcggctctggtgga 348
to top
>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179776

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     ctcgactcgactcaactcgattcg 63
              ||||||||||||||| ||||||||
Sbjct: 103823 ctcgactcgactcaattcgattcg 103800
to top
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179205

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 58270 ctcgactcgactcaactcga 58289
to top
>gb|AE005681.1| Caulobacter crescentus CB15 section 7 of 359 of the complete genome
          Length = 10507

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 98   agccatggccggcggcgacggcga 121
            |||||| |||||||||||||||||
Sbjct: 6696 agccatcgccggcggcgacggcga 6673
to top
>ref|NM_136727.2| Drosophila melanogaster CAP CG18408-RA, transcript variant A (CAP),
            mRNA
          Length = 7846

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  cggcggcgacggcgatcgcg 126
            ||||||||||||||||||||
Sbjct: 2418 cggcggcgacggcgatcgcg 2399
to top
>ref|NM_132059.2| Drosophila melanogaster CG4766-RA (CG4766), mRNA
          Length = 2677

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   ctcgactcgactcaactcga 59
            ||||||||||||||||||||
Sbjct: 2125 ctcgactcgactcaactcga 2144
to top
>dbj|AK138596.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330073B21 product:Hypothetical
           RNA-binding region RNP-1 (RAVER1), full insert sequence
          Length = 3452

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 380 tcgaaggcggctctggtgga 361
to top
>gb|AC090354.8| Homo sapiens chromosome 18, clone RP11-735P10, complete sequence
          Length = 211162

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    ggtctcagttggacttgaga 474
              ||||||||||||||||||||
Sbjct: 116965 ggtctcagttggacttgaga 116984
to top
>gb|AF268070.1|AF268070 Ustilago maydis MAP kinase pathway-interacting Ubc2 (ubc2) gene,
            complete cds
          Length = 5516

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 40   ctcgactcgactcaactcgattcg 63
            ||||||||||||| ||||||||||
Sbjct: 1530 ctcgactcgactcgactcgattcg 1553
to top
>dbj|AK168436.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920018J04 product:Hypothetical
           RNA-binding region RNP-1 (RAVER1), full insert sequence
          Length = 2415

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 389 tcgaaggcggctctggtgga 370
to top
>gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone
             BACR48F07, complete sequence
          Length = 175681

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   cggcggcgacggcgatcgcg 126
             ||||||||||||||||||||
Sbjct: 82408 cggcggcgacggcgatcgcg 82389
to top
>dbj|AK039928.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430032E17 product:hypothetical
           RNA-binding region RNP-1  (RNA recognition motif)
           containing protein, full insert sequence
          Length = 902

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 380 tcgaaggcggctctggtgga 361
to top
>dbj|AK084478.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330004I06 product:hypothetical
           Proline-rich region/RNA-binding region RNP-1  (RNA
           recognition motif) containing protein, full insert
           sequence
          Length = 2753

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 380 tcgaaggcggctctggtgga 361
to top
>dbj|AK051444.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130049F14 product:hypothetical
           RNA-binding region RNP-1  (RNA recognition motif)
           containing protein, full insert sequence
          Length = 2671

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 380 tcgaaggcggctctggtgga 361
to top
>dbj|AK079191.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
           enriched library, clone:9530018J06 product:hypothetical
           Proline-rich region/RNA-binding region RNP-1  (RNA
           recognition motif) containing protein, full insert
           sequence
          Length = 2405

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 373 tcgaaggcggctctggtgga 354
to top
>dbj|AK004919.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched
           library, clone:1300006N24 product:hypothetical
           RNA-binding region RNP-1  (RNA recognition motif)
           containing protein, full insert sequence
          Length = 2992

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 381 tcgaaggcggctctggtgga 362
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      gataatgaggtgaagaagag 256
                ||||||||||||||||||||
Sbjct: 25838895 gataatgaggtgaagaagag 25838914



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 39       cctcgactcgactcaactcgattc 62
                |||||||||||||| |||||||||
Sbjct: 12188662 cctcgactcgactcgactcgattc 12188685
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 151      cctcggcgccatcgaaggcg 170
                ||||||||||||||||||||
Sbjct: 22059513 cctcggcgccatcgaaggcg 22059532
to top
>gb|AC007083.11|AC007083 Drosophila melanogaster, chromosome 2L, region 33A-, BAC clone BACR43K24,
              complete sequence
          Length = 188067

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     ctcgactcgactcaactcga 59
              ||||||||||||||||||||
Sbjct: 120686 ctcgactcgactcaactcga 120705
to top
>gb|AC159138.6| Mus musculus  BAC RP23-315F23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 180124

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 258   gacttcaccaagctggagctcaag 281
             ||||||| ||||||||||||||||
Sbjct: 73305 gacttcatcaagctggagctcaag 73328
to top
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete
             sequence
          Length = 167397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   cctcggcgccatcgaaggcg 170
             ||||||||||||||||||||
Sbjct: 81798 cctcggcgccatcgaaggcg 81779
to top
>ref|XM_575456.1| PREDICTED: Rattus norvegicus similar to contactin associated
            protein-like 2 isoform a (LOC500105), mRNA
          Length = 4128

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  gacttcaccaagctggagctcaag 281
            ||||||| ||||||||||||||||
Sbjct: 2278 gacttcatcaagctggagctcaag 2301
to top
>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592B08
          Length = 131096

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    cctcgactcgactcaactcgattc 62
             |||||||||||||| |||||||||
Sbjct: 25684 cctcgactcgactcgactcgattc 25707
to top
>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468A12
          Length = 143018

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     cctcgactcgactcaactcgattc 62
              |||||||||||||| |||||||||
Sbjct: 131451 cctcgactcgactcgactcgattc 131474
to top
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    gataatgaggtgaagaagag 256
              ||||||||||||||||||||
Sbjct: 121099 gataatgaggtgaagaagag 121118
to top
>dbj|AK129232.1| Mus musculus mRNA for mKIAA0868 protein
          Length = 6957

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  gacttcaccaagctggagctcaag 281
            ||||||| ||||||||||||||||
Sbjct: 2732 gacttcatcaagctggagctcaag 2755
to top
>gb|AF130815.1|AF130815 Buchnera aphidicola natural-host Melaphis rhois ferredoxin-NADP
            reductase (fpr) gene, partial cds; anthranilate synthase
            large subunit (trpE) and anthranilate synthase small
            subunit (trpG) genes, complete cds; heat shock protein
            HslU (hslU) gene, partial cds; and unknown gene
          Length = 3980

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  tatgcatgaaatacatctaa 432
            ||||||||||||||||||||
Sbjct: 1982 tatgcatgaaatacatctaa 1963
to top
>dbj|AK069458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020F03, full
           insert sequence
          Length = 1188

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 cctcggcgccatcgaaggcg 170
           ||||||||||||||||||||
Sbjct: 432 cctcggcgccatcgaaggcg 413
to top
>gb|AF145667.1|AF145667 Drosophila melanogaster clone GH11415 BcDNA.GH11415 (BcDNA.GH11415)
            mRNA, complete cds
          Length = 2691

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 40   ctcgactcgactcaactcga 59
            ||||||||||||||||||||
Sbjct: 2125 ctcgactcgactcaactcga 2144
to top
>gb|AE003632.4| Drosophila melanogaster chromosome 2L, section 41 of 83 of the complete
             sequence
          Length = 244231

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 68604 ctcgactcgactcaactcga 68623
to top
>gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20 of 73 of the complete
              sequence
          Length = 240481

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    cggcggcgacggcgatcgcg 126
              ||||||||||||||||||||
Sbjct: 158564 cggcggcgacggcgatcgcg 158545
to top
>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete
             sequence
          Length = 316981

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    ctcgactcgactcaactcgattcg 63
             ||||||||||||| ||||||||||
Sbjct: 17823 ctcgactcgactcgactcgattcg 17800
to top
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete
              sequence
          Length = 307657

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     ctcgactcgactcaactcgattcg 63
              ||||||||||||||| ||||||||
Sbjct: 138500 ctcgactcgactcaattcgattcg 138523
to top
>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete
             sequence
          Length = 317322

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ctcgactcgactcaactcga 59
             ||||||||||||||||||||
Sbjct: 80980 ctcgactcgactcaactcga 80961
to top
>gb|BC083865.1| Rattus norvegicus RAVER1 homolog (human), mRNA (cDNA clone
           MGC:95117 IMAGE:7127766), complete cds
          Length = 3473

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 373 tcgaaggcggctctggtgga 354
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    cggcgatcgcgcccgtgcgc 135
              ||||||||||||||||||||
Sbjct: 779612 cggcgatcgcgcccgtgcgc 779631
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>dbj|AB053478.1| Drosophila melanogaster dcp mRNA for DCAPL1, complete cds
          Length = 7746

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  cggcggcgacggcgatcgcg 126
            ||||||||||||||||||||
Sbjct: 3012 cggcggcgacggcgatcgcg 2993
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>ref|NM_001013939.1| Rattus norvegicus RAVER1 homolog (human) (Raver1h), mRNA
          Length = 3473

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tcgaaggcggctctggtgga 181
           ||||||||||||||||||||
Sbjct: 373 tcgaaggcggctctggtgga 354


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,086,710
Number of Sequences: 3902068
Number of extensions: 3086710
Number of successful extensions: 76353
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75073
Number of HSP's gapped (non-prelim): 1276
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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