ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187597.1| Oryza sativa (japonica cultivar-group), predic... 133 5e-28
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 133 5e-28
3gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 133 5e-28
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
5ref|XM_001000597.1| PREDICTED: Mus musculus zinc finger, A20 dom... 44 0.39
6gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, c... 44 0.39
7gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 44 0.39
8ref|NM_009551.2| Mus musculus zinc finger, A20 domain containing... 44 0.39
9dbj|AK131911.1| Mus musculus adult male tongue cDNA, RIKEN full-... 44 0.39
10dbj|AK076397.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 44 0.39
11dbj|AK018054.1| Mus musculus adult male thymus cDNA, RIKEN full-... 44 0.39
12ref|XM_215251.3| PREDICTED: Rattus norvegicus zinc finger protei... 44 0.39
13gb|BC080270.1| Mus musculus cDNA clone IMAGE:6816490, containing... 44 0.39
14gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.5
15gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome... 42 1.5
16ref|NM_001005877.1| Rattus norvegicus G protein-coupled receptor... 42 1.5
17gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome... 42 1.5
18gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
19dbj|AB106675.1| Rattus norvegicus mRNA for GPR43, complete cds 42 1.5
20gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, com... 40 6.0
21gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
22ref|XM_544464.2| PREDICTED: Canis familiaris similar to acid sph... 40 6.0
23gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence 40 6.0
24gb|AC091231.10| Homo sapiens chromosome 15, clone RP11-702L15, c... 40 6.0
25emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C... 40 6.0
26emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.0
27emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 40 6.0
28dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl... 40 6.0
29dbj|AK125637.1| Homo sapiens cDNA FLJ43649 fis, clone SYNOV4001326 40 6.0
30ref|XM_925812.1| PREDICTED: Homo sapiens hypothetical gene suppo... 40 6.0
31dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
33gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) ch... 40 6.0
34gb|AC090425.15| Homo sapiens 3 BAC RP11-15L13 (Roswell Park Canc... 40 6.0
35gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Ca... 40 6.0
36gb|AE004833.1| Pseudomonas aeruginosa PAO1, section 394 of 529 o... 40 6.0
37ref|NM_001013682.1| Homo sapiens hypothetical gene supported by ... 40 6.0
38gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 6.0
39gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.0
40gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
41emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chr... 40 6.0
42emb|Z75742.1|HSLUCA10 Human DNA sequence from clone XXcos-10 on ... 40 6.0
43emb|AL954151.8| Mouse DNA sequence from clone RP24-370P7 on chro... 40 6.0 
>ref|NM_187597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2583

 Score =  133 bits (67), Expect = 5e-28
 Identities = 123/139 (88%), Gaps = 2/139 (1%)
 Strand = Plus / Plus

                                                                       
Query: 310 gtggtcaccacgccggggctcatggaggactcccccgcgtccccctccacgccgtccccg 369
           ||||| |||||  |||||||||| || ||||||||   ||||||||| ||||||||||||
Sbjct: 106 gtggtgaccaccgcggggctcatcgacgactccccgctgtccccctcgacgccgtccccg 165

                                                                       
Query: 370 gcgccgcgcccgcgcaccatcgtcgtcgccaaccacctccccgatcc-ggcccaccgccc 428
            ||||||| |||||||||||||| |||||||||||||| ||| |||| ||| ||||||||
Sbjct: 166 tcgccgcggccgcgcaccatcgtggtcgccaaccacct-ccctatccgggctcaccgccc 224

                              
Query: 429 ggcgtcgccgtcggagccg 447
           |||||||||||||||||||
Sbjct: 225 ggcgtcgccgtcggagccg 243



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 217 tcctactccaacctgcttgacctggccacgggcgcggcggaccag 261
           ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 13  tcctactccaacctgctggacctggccaccggcgcggcggaccag 57
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 5e-28
 Identities = 123/139 (88%), Gaps = 2/139 (1%)
 Strand = Plus / Minus

                                                                           
Query: 310     gtggtcaccacgccggggctcatggaggactcccccgcgtccccctccacgccgtccccg 369
               ||||| |||||  |||||||||| || ||||||||   ||||||||| ||||||||||||
Sbjct: 6490619 gtggtgaccaccgcggggctcatcgacgactccccgctgtccccctcgacgccgtccccg 6490560

                                                                           
Query: 370     gcgccgcgcccgcgcaccatcgtcgtcgccaaccacctccccgatcc-ggcccaccgccc 428
                ||||||| |||||||||||||| |||||||||||||| ||| |||| ||| ||||||||
Sbjct: 6490559 tcgccgcggccgcgcaccatcgtggtcgccaaccacct-ccctatccgggctcaccgccc 6490501

                                  
Query: 429     ggcgtcgccgtcggagccg 447
               |||||||||||||||||||
Sbjct: 6490500 ggcgtcgccgtcggagccg 6490482



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                            
Query: 217     tcctactccaacctgcttgacctggccacgggcgcggcggaccag 261
               ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 6490712 tcctactccaacctgctggacctggccaccggcgcggcggaccag 6490668
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score =  133 bits (67), Expect = 5e-28
 Identities = 123/139 (88%), Gaps = 2/139 (1%)
 Strand = Plus / Minus

                                                                         
Query: 310   gtggtcaccacgccggggctcatggaggactcccccgcgtccccctccacgccgtccccg 369
             ||||| |||||  |||||||||| || ||||||||   ||||||||| ||||||||||||
Sbjct: 33381 gtggtgaccaccgcggggctcatcgacgactccccgctgtccccctcgacgccgtccccg 33322

                                                                         
Query: 370   gcgccgcgcccgcgcaccatcgtcgtcgccaaccacctccccgatcc-ggcccaccgccc 428
              ||||||| |||||||||||||| |||||||||||||| ||| |||| ||| ||||||||
Sbjct: 33321 tcgccgcggccgcgcaccatcgtggtcgccaaccacct-ccctatccgggctcaccgccc 33263

                                
Query: 429   ggcgtcgccgtcggagccg 447
             |||||||||||||||||||
Sbjct: 33262 ggcgtcgccgtcggagccg 33244



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                          
Query: 217   tcctactccaacctgcttgacctggccacgggcgcggcggaccag 261
             ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 33474 tcctactccaacctgctggacctggccaccggcgcggcggaccag 33430
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 5e-28
 Identities = 123/139 (88%), Gaps = 2/139 (1%)
 Strand = Plus / Minus

                                                                           
Query: 310     gtggtcaccacgccggggctcatggaggactcccccgcgtccccctccacgccgtccccg 369
               ||||| |||||  |||||||||| || ||||||||   ||||||||| ||||||||||||
Sbjct: 6489832 gtggtgaccaccgcggggctcatcgacgactccccgctgtccccctcgacgccgtccccg 6489773

                                                                           
Query: 370     gcgccgcgcccgcgcaccatcgtcgtcgccaaccacctccccgatcc-ggcccaccgccc 428
                ||||||| |||||||||||||| |||||||||||||| ||| |||| ||| ||||||||
Sbjct: 6489772 tcgccgcggccgcgcaccatcgtggtcgccaaccacct-ccctatccgggctcaccgccc 6489714

                                  
Query: 429     ggcgtcgccgtcggagccg 447
               |||||||||||||||||||
Sbjct: 6489713 ggcgtcgccgtcggagccg 6489695



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                            
Query: 217     tcctactccaacctgcttgacctggccacgggcgcggcggaccag 261
               ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 6489925 tcctactccaacctgctggacctggccaccggcgcggcggaccag 6489881
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>ref|XM_001000597.1| PREDICTED: Mus musculus zinc finger, A20 domain containing 2,
           transcript variant 3 (Za20d2), mRNA
          Length = 4692

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 164 ccggcccaccgcccggcgtcgc 185
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>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 415    ccggcccaccgcccggcgtcgc 436
              ||||||||||||||||||||||
Sbjct: 102100 ccggcccaccgcccggcgtcgc 102121
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 424    cgcccggcgtcgccgtcggagc 445
              ||||||||||||||||||||||
Sbjct: 276390 cgcccggcgtcgccgtcggagc 276369
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>ref|NM_009551.2| Mus musculus zinc finger, A20 domain containing 2 (Za20d2), mRNA
          Length = 2835

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 410 ccggcccaccgcccggcgtcgc 431
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>dbj|AK131911.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310021N08 product:zinc finger protein
           216, full insert sequence
          Length = 2559

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 404 ccggcccaccgcccggcgtcgc 425
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>dbj|AK076397.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732491G13 product:zinc finger protein
           216, full insert sequence
          Length = 2835

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 410 ccggcccaccgcccggcgtcgc 431
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>dbj|AK018054.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830475F03 product:zinc finger protein
           216, full insert sequence
          Length = 1589

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 425 ccggcccaccgcccggcgtcgc 446
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>ref|XM_215251.3| PREDICTED: Rattus norvegicus zinc finger protein 216 (predicted)
           (Zfp216_predicted), mRNA
          Length = 2949

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 797 ccggcccaccgcccggcgtcgc 818
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>gb|BC080270.1| Mus musculus cDNA clone IMAGE:6816490, containing frame-shift
           errors
          Length = 2572

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 415 ccggcccaccgcccggcgtcgc 436
           ||||||||||||||||||||||
Sbjct: 391 ccggcccaccgcccggcgtcgc 412
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   tccccgatccggcccaccgcc 427
             |||||||||||||||||||||
Sbjct: 20047 tccccgatccggcccaccgcc 20027
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>gb|AC165079.2| Mus musculus BAC clone RP24-92K17 from chromosome 16, complete sequence
          Length = 156977

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      agacacacacccaccccaggt 24
              |||||||||||||||||||||
Sbjct: 147173 agacacacacccaccccaggt 147153
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>ref|NM_001005877.1| Rattus norvegicus G protein-coupled receptor 43 (Gpr43), mRNA
          Length = 993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ggcccaccgcccggcgtcgcc 437
           |||||||||||||||||||||
Sbjct: 667 ggcccaccgcccggcgtcgcc 647
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>gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome 16, complete
            sequence
          Length = 252926

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 4    agacacacacccaccccaggt 24
            |||||||||||||||||||||
Sbjct: 2063 agacacacacccaccccaggt 2043
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 360     gccgtccccggcgccgcgccc 380
               |||||||||||||||||||||
Sbjct: 3305385 gccgtccccggcgccgcgccc 3305405



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 359     cgccgtccccggcgccgcgcccgcg 383
               ||||||||||| |||||||||||||
Sbjct: 1570108 cgccgtccccgccgccgcgcccgcg 1570084



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     ggccacgggcgcggcggacc 259
               ||||||||||||||||||||
Sbjct: 1839286 ggccacgggcgcggcggacc 1839267
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>dbj|AB106675.1| Rattus norvegicus mRNA for GPR43, complete cds
          Length = 993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 ggcccaccgcccggcgtcgcc 437
           |||||||||||||||||||||
Sbjct: 667 ggcccaccgcccggcgtcgcc 647
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>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence
          Length = 200891

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 359   cgccgtccccggcgccgcgcccgc 382
             |||||||||||||||||| |||||
Sbjct: 68706 cgccgtccccggcgccgcccccgc 68683
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>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
             complete sequence
          Length = 169073

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 389   tcgtcgtcgccaaccacctccccg 412
             ||||||||||||||| ||||||||
Sbjct: 30333 tcgtcgtcgccaaccgcctccccg 30356
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>ref|XM_544464.2| PREDICTED: Canis familiaris similar to acid sphingomyelinase-like
            phosphodiesterase 3B isoform 1 (LOC487338), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 365  ccccggcgccgcgcccgcgc 384
            ||||||||||||||||||||
Sbjct: 1329 ccccggcgccgcgcccgcgc 1348
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>gb|AC144400.2| Lemur catta clone LBNL2-87E20, complete sequence
          Length = 181705

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    cgggaggaggccatggtgtc 212
              ||||||||||||||||||||
Sbjct: 106586 cgggaggaggccatggtgtc 106567
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>gb|AC091231.10| Homo sapiens chromosome 15, clone RP11-702L15, complete sequence
          Length = 187779

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tggatgccttgttgctgctg 48
             ||||||||||||||||||||
Sbjct: 74265 tggatgccttgttgctgctg 74284
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>emb|AL117344.12|HSJ395C13 Human DNA sequence from clone RP3-395C13 on chromosome 6q25.2-26
             Contains the 5' end of a novel gene, a hypothetical
             protein PNAS-131 pseudogene and a CpG island, complete
             sequence
          Length = 150336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    gcgcctcccttcttcctcct 116
             ||||||||||||||||||||
Sbjct: 12867 gcgcctcccttcttcctcct 12848
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 362     cgtccccggcgccgcgcccg 381
               ||||||||||||||||||||
Sbjct: 1728411 cgtccccggcgccgcgcccg 1728392
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>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 353    cctccacgccgtccccggcg 372
              ||||||||||||||||||||
Sbjct: 117217 cctccacgccgtccccggcg 117198
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>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    gccgtccccggcgccgcgcc 379
              ||||||||||||||||||||
Sbjct: 118770 gccgtccccggcgccgcgcc 118751
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>dbj|AK125637.1| Homo sapiens cDNA FLJ43649 fis, clone SYNOV4001326
          Length = 3837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  gcgcctcccttcttcctcct 116
           ||||||||||||||||||||
Sbjct: 123 gcgcctcccttcttcctcct 142
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>ref|XM_925812.1| PREDICTED: Homo sapiens hypothetical gene supported by AK125637
           (LOC401280), mRNA
          Length = 3823

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  gcgcctcccttcttcctcct 116
           ||||||||||||||||||||
Sbjct: 117 gcgcctcccttcttcctcct 136
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 384      caccatcgtcgtcgccaacc 403
                ||||||||||||||||||||
Sbjct: 15327459 caccatcgtcgtcgccaacc 15327478
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 389      tcgtcgtcgccaaccacctccccg 412
                ||||||||||||||| ||||||||
Sbjct: 25513926 tcgtcgtcgccaaccgcctccccg 25513949
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>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
             complete sequence
          Length = 144720

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   caccatcgtcgtcgccaacc 403
             ||||||||||||||||||||
Sbjct: 44822 caccatcgtcgtcgccaacc 44841
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>gb|AC090425.15| Homo sapiens 3 BAC RP11-15L13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 97868

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    cgcctcccttcttcctcctg 117
             ||||||||||||||||||||
Sbjct: 38628 cgcctcccttcttcctcctg 38609
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>gb|AC073896.41| Homo sapiens 12 BAC RP11-977G19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174487

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gcctcccttcttcctcctgg 118
             ||||||||||||||||||||
Sbjct: 85956 gcctcccttcttcctcctgg 85975
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>gb|AE004833.1| Pseudomonas aeruginosa PAO1, section 394 of 529 of the complete
            genome
          Length = 11553

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  gatccggcccaccgcccggc 431
            ||||||||||||||||||||
Sbjct: 9524 gatccggcccaccgcccggc 9543
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>ref|NM_001013682.1| Homo sapiens hypothetical gene supported by AK125637 (LOC401280),
           mRNA
          Length = 3837

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 97  gcgcctcccttcttcctcct 116
           ||||||||||||||||||||
Sbjct: 123 gcgcctcccttcttcctcct 142
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 339   ctcccccgcgtccccctccacgccgtccccggcgcc 374
             |||||||||||||||| || |||||  |||||||||
Sbjct: 57143 ctcccccgcgtcccccgccccgccgcgcccggcgcc 57178
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 309     cgtggtcaccacgccggggc 328
               ||||||||||||||||||||
Sbjct: 2928350 cgtggtcaccacgccggggc 2928369
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 384      caccatcgtcgtcgccaacc 403
                ||||||||||||||||||||
Sbjct: 15335700 caccatcgtcgtcgccaacc 15335719
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>emb|AL772319.13| Mouse DNA sequence from clone RP23-397E2 on chromosome 4, complete
           sequence
          Length = 206709

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 cccttcttcctcctggactt 122
           ||||||||||||||||||||
Sbjct: 786 cccttcttcctcctggactt 805
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>emb|Z75742.1|HSLUCA10 Human DNA sequence from clone XXcos-10 on chromosome 3, complete
             sequence
          Length = 36016

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    gctgctgagcccaggccttc 61
             ||||||||||||||||||||
Sbjct: 10812 gctgctgagcccaggccttc 10793
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>emb|AL954151.8| Mouse DNA sequence from clone RP24-370P7 on chromosome 4, complete
            sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  cccttcttcctcctggactt 122
            ||||||||||||||||||||
Sbjct: 2780 cccttcttcctcctggactt 2799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,345,619
Number of Sequences: 3902068
Number of extensions: 3345619
Number of successful extensions: 85492
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84280
Number of HSP's gapped (non-prelim): 1208
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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