ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK099745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 9e-39
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
3dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
4dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
5ref|NM_194213.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
7dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
8dbj|AK122009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
9dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcr... 46 0.095
10gb|AC154451.2| Mus musculus BAC clone RP24-171K15 from chromosom... 46 0.095
11dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.095
12emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.37
13emb|BX640433.1| Bordetella parapertussis strain 12822, complete ... 44 0.37
14emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 44 0.37
15gb|DQ059604.1| Melampsora laricis-populina clone MLP13 microsate... 44 0.37
16gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.37
17gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocycli... 42 1.5
18gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
19gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
20gb|AY658768.1| Synthetic construct Peudomonas aeruginosa clone F... 42 1.5
21gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
22emb|AJ402811.1|SSA402811 Salmo salar microsatellite DNA, clone 3... 42 1.5
23emb|AJ402770.1|SSA402770 Salmo salar microsatellite DNA, clone 3... 42 1.5
24gb|BT009448.1| Triticum aestivum clone wlmk8.pk0018.e8:fis, full... 42 1.5
25emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosm... 42 1.5
26emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 42 1.5
27emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 1.5
28emb|BX470119.17| Zebrafish DNA sequence from clone CH211-225L4 i... 42 1.5
29gb|AC147364.7| Medicago truncatula clone mth2-68g24, complete se... 42 1.5
30gb|AY069953.1| Hordeum vulgare APETALA2-like protein (AP2L1) mRN... 42 1.5
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
34gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 o... 42 1.5
35gb|AF166333.1|AF166333 Myxococcus xanthus histidine protein kina... 42 1.5
36dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
37emb|AJ430047.1|MTR430047 Medicago truncatula mRNA for 1-deoxy-D-... 42 1.5
38dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
39emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.5
40emb|BX936462.20| Zebrafish DNA sequence from clone CH211-147O6 i... 42 1.5
41gb|AY107405.1| Zea mays PCO140045 mRNA sequence 42 1.5
42gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
43emb|AL713911.3|CNS07YQC Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
44dbj|D50811.1|PSECDPDS Pseudomonas aeruginosa cds gene for CDP-di... 42 1.5
45ref|XM_478702.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
46ref|XM_475078.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
47ref|XM_473186.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
48gb|AC110173.11| Mus musculus chromosome 8, clone RP24-396D19, co... 40 5.8
49gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans s... 40 5.8
50gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.8
51gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.8
52gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome ... 40 5.8
53gb|BC036819.1| Homo sapiens tubulin tyrosine ligase, mRNA (cDNA ... 40 5.8
54emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 5.8
55gb|AF029344.2| Burkholderia cepacia putative transcription facto... 40 5.8
56gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, com... 40 5.8
57gb|AY342322.1| Oryza sativa (japonica cultivar-group) monosaccha... 40 5.8
58emb|AL359076.16| Human DNA sequence from clone RP11-264I13 on ch... 40 5.8
59emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.8
60emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 40 5.8
61emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 5.8
62emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 40 5.8
63emb|BX537264.9| Zebrafish DNA sequence from clone CH211-1C4 in l... 40 5.8
64gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.8
65gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.8
66dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
67gb|AF497482.1| Micromonospora echinospora calicheamicin biosynth... 40 5.8
68gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.8
69gb|AC012442.7| Homo sapiens BAC clone RP11-1I24 from 2, complete... 40 5.8
70dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
71dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
72dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.8
73dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
74dbj|AK106443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
75emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 i... 40 5.8
76gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, comp... 40 5.8
77gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.8
78gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.8
79emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 5.8
80gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, com... 40 5.8
81emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chr... 40 5.8
82gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8 
>dbj|AK099745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091J21, full
           insert sequence
          Length = 3189

 Score =  168 bits (85), Expect = 9e-39
 Identities = 178/209 (85%)
 Strand = Plus / Plus

                                                                       
Query: 226 gtcgacgacgtcaacgcggaccgcacggtgctcgccggcacccggctcagcctcatcgcg 285
           |||| |||||||||||| ||||| || ||||| ||||| |||  ||||||||||||| | 
Sbjct: 292 gtcggcgacgtcaacgccgaccggaccgtgctggccgggaccacgctcagcctcatctcc 351

                                                                       
Query: 286 caggacaccaactgcagcggcttcgtcgggaccatcgaagcattggagctaatggagaat 345
           |||||||||||||||||||| ||  | || || |||||||||||| || |||||||||| 
Sbjct: 352 caggacaccaactgcagcgggtttcttggaacaatcgaagcattgcagttaatggagaaa 411

                                                                       
Query: 346 aatgtagttgctgttattggcccacagtcatctggtataggccatgtcatctcccatgtt 405
           || || |||||||| ||||| ||||| || ||||| ||||||||||| || || ||||||
Sbjct: 412 aacgtggttgctgtcattggtccacaatcctctggaataggccatgttatttcacatgtt 471

                                        
Query: 406 gttaacgagctacatgttcctcttctatc 434
           ||||| |||||||||||||||||| ||||
Sbjct: 472 gttaatgagctacatgttcctcttttatc 500
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  167 bits (84), Expect = 4e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                            
Query: 126      ggcgggggccgggccgcgtccgagcgaggtcgccgtgggcgcgctcttcacctacgactc 185
                ||||||||| |||  ||| |||||||||||  |  | |||||||||| ||||||||||||
Sbjct: 27962064 ggcgggggcgggggagcggccgagcgaggtgtcaatcggcgcgctctacacctacgactc 27962123

                                                                            
Query: 186      cgtcattggccgcgcggcgcggctcgccatcgagctcgccgtcgacgacgtcaacgcgga 245
                 || ||||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||
Sbjct: 27962124 ggtgattgggcgcgcggcggggctcgccatcgagctcgccgtcggcgacgtcaacgccga 27962183

                                                                            
Query: 246      ccgcacggtgctcgccggcacccggctcagcctcatcgcgcaggacaccaactgcagcgg 305
                ||| || ||||| ||||| |||  ||||||||||||| | ||||||||||||||||||||
Sbjct: 27962184 ccggaccgtgctggccgggaccacgctcagcctcatctcccaggacaccaactgcagcgg 27962243



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                            
Query: 324      agcattggagctaatggagaataatgtagttgctgttattggcccacagtcatctggtat 383
                ||||||| || |||||||||| || || |||||||| ||||| ||||| || ||||| ||
Sbjct: 27963733 agcattgcagttaatggagaaaaacgtggttgctgtcattggtccacaatcctctggaat 27963792

                                                                   
Query: 384      aggccatgtcatctcccatgttgttaacgagctacatgttcctcttctatc 434
                ||||||||| || || ||||||||||| |||||||||||||||||| ||||
Sbjct: 27963793 aggccatgttatttcacatgttgttaatgagctacatgttcctcttttatc 27963843



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 212     ccatcgagctcgccgtcgacgacg 235
               |||||||| |||||||||||||||
Sbjct: 1413845 ccatcgagttcgccgtcgacgacg 1413822
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>dbj|AP004797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0547F09
          Length = 140615

 Score =  167 bits (84), Expect = 4e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                        
Query: 126  ggcgggggccgggccgcgtccgagcgaggtcgccgtgggcgcgctcttcacctacgactc 185
            ||||||||| |||  ||| |||||||||||  |  | |||||||||| ||||||||||||
Sbjct: 6883 ggcgggggcgggggagcggccgagcgaggtgtcaatcggcgcgctctacacctacgactc 6942

                                                                        
Query: 186  cgtcattggccgcgcggcgcggctcgccatcgagctcgccgtcgacgacgtcaacgcgga 245
             || ||||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||
Sbjct: 6943 ggtgattgggcgcgcggcggggctcgccatcgagctcgccgtcggcgacgtcaacgccga 7002

                                                                        
Query: 246  ccgcacggtgctcgccggcacccggctcagcctcatcgcgcaggacaccaactgcagcgg 305
            ||| || ||||| ||||| |||  ||||||||||||| | ||||||||||||||||||||
Sbjct: 7003 ccggaccgtgctggccgggaccacgctcagcctcatctcccaggacaccaactgcagcgg 7062



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                        
Query: 324  agcattggagctaatggagaataatgtagttgctgttattggcccacagtcatctggtat 383
            ||||||| || |||||||||| || || |||||||| ||||| ||||| || ||||| ||
Sbjct: 8552 agcattgcagttaatggagaaaaacgtggttgctgtcattggtccacaatcctctggaat 8611

                                                               
Query: 384  aggccatgtcatctcccatgttgttaacgagctacatgttcctcttctatc 434
            ||||||||| || || ||||||||||| |||||||||||||||||| ||||
Sbjct: 8612 aggccatgttatttcacatgttgttaatgagctacatgttcctcttttatc 8662
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>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0003H08
          Length = 142068

 Score =  167 bits (84), Expect = 4e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                          
Query: 126    ggcgggggccgggccgcgtccgagcgaggtcgccgtgggcgcgctcttcacctacgactc 185
              ||||||||| |||  ||| |||||||||||  |  | |||||||||| ||||||||||||
Sbjct: 115987 ggcgggggcgggggagcggccgagcgaggtgtcaatcggcgcgctctacacctacgactc 116046

                                                                          
Query: 186    cgtcattggccgcgcggcgcggctcgccatcgagctcgccgtcgacgacgtcaacgcgga 245
               || ||||| ||||||||| |||||||||||||||||||||||| |||||||||||| ||
Sbjct: 116047 ggtgattgggcgcgcggcggggctcgccatcgagctcgccgtcggcgacgtcaacgccga 116106

                                                                          
Query: 246    ccgcacggtgctcgccggcacccggctcagcctcatcgcgcaggacaccaactgcagcgg 305
              ||| || ||||| ||||| |||  ||||||||||||| | ||||||||||||||||||||
Sbjct: 116107 ccggaccgtgctggccgggaccacgctcagcctcatctcccaggacaccaactgcagcgg 116166



 Score =  101 bits (51), Expect = 2e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                          
Query: 324    agcattggagctaatggagaataatgtagttgctgttattggcccacagtcatctggtat 383
              ||||||| || |||||||||| || || |||||||| ||||| ||||| || ||||| ||
Sbjct: 117656 agcattgcagttaatggagaaaaacgtggttgctgtcattggtccacaatcctctggaat 117715

                                                                 
Query: 384    aggccatgtcatctcccatgttgttaacgagctacatgttcctcttctatc 434
              ||||||||| || || ||||||||||| |||||||||||||||||| ||||
Sbjct: 117716 aggccatgttatttcacatgttgttaatgagctacatgttcctcttttatc 117766
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>ref|NM_194213.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2868

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 163 ggcgcgctcttcacctacgactccgtcattggccgcgcggcgcggctcgccatcgagctc 222
           |||||||||||||||| |||||||||||| ||  | |||||   | ||||||||||||| 
Sbjct: 100 ggcgcgctcttcaccttcgactccgtcatcgggagggcggccaaggtcgccatcgagctg 159

                         
Query: 223 gccgtcgacgacgt 236
           ||||||| ||||||
Sbjct: 160 gccgtcgccgacgt 173
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 163    ggcgcgctcttcacctacgactccgtcattggccgcgcggcgcggctcgccatcgagctc 222
              |||||||||||||||| |||||||||||| ||  | |||||   | ||||||||||||| 
Sbjct: 190667 ggcgcgctcttcaccttcgactccgtcatcgggagggcggccaaggtcgccatcgagctg 190726

                            
Query: 223    gccgtcgacgacgt 236
              ||||||| ||||||
Sbjct: 190727 gccgtcgccgacgt 190740



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 155      tcgccgtgggcgcgctcttc 174
                ||||||||||||||||||||
Sbjct: 22300726 tcgccgtgggcgcgctcttc 22300707
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 163   ggcgcgctcttcacctacgactccgtcattggccgcgcggcgcggctcgccatcgagctc 222
             |||||||||||||||| |||||||||||| ||  | |||||   | ||||||||||||| 
Sbjct: 25531 ggcgcgctcttcaccttcgactccgtcatcgggagggcggccaaggtcgccatcgagctg 25590

                           
Query: 223   gccgtcgacgacgt 236
             ||||||| ||||||
Sbjct: 25591 gccgtcgccgacgt 25604
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>dbj|AK122009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111F13, full
           insert sequence
          Length = 3648

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 163 ggcgcgctcttcacctacgactccgtcattggccgcgcggcgcggctcgccatcgagctc 222
           |||||||||||||||| |||||||||||| ||  | |||||   | ||||||||||||| 
Sbjct: 616 ggcgcgctcttcaccttcgactccgtcatcgggagggcggccaaggtcgccatcgagctg 675

                         
Query: 223 gccgtcgacgacgt 236
           ||||||| ||||||
Sbjct: 676 gccgtcgccgacgt 689
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>dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcriptional regulator,
            ABC-transport system, substrate-binding extracellular
            domain, ABC-transport system, membrane integral subunit,
            ABC-transport system, membrane integral subunit,
            ABC-transport system, ATP-binding protein, Cytochrome
            P-450, type III polyketide synthase, subtilisine-like
            serine protease, chitinase, partial and complete cds
          Length = 12095

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 257  tcgccggcacccggctcagcctcatcg 283
            |||||||||||||||||| ||||||||
Sbjct: 3067 tcgccggcacccggctcatcctcatcg 3093
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>gb|AC154451.2| Mus musculus BAC clone RP24-171K15 from chromosome 13, complete
             sequence
          Length = 162744

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 10    acagacagaacagacagacaggg 32
             |||||||||||||||||||||||
Sbjct: 66270 acagacagaacagacagacaggg 66292
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 103     gccgcggcgagggcggtcaccgc 125
               |||||||||||||||||||||||
Sbjct: 4139603 gccgcggcgagggcggtcaccgc 4139625
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>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 258   cgccggcacccggctcagcctc 279
             ||||||||||||||||||||||
Sbjct: 64881 cgccggcacccggctcagcctc 64860
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>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 258  cgccggcacccggctcagcctc 279
            ||||||||||||||||||||||
Sbjct: 1388 cgccggcacccggctcagcctc 1367
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 258   cgccggcacccggctcagcctc 279
             ||||||||||||||||||||||
Sbjct: 65045 cgccggcacccggctcagcctc 65024
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>gb|DQ059604.1| Melampsora laricis-populina clone MLP13 microsatellite sequence
          Length = 187

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  acagacagaacagacagacagg 31
           ||||||||||||||||||||||
Sbjct: 145 acagacagaacagacagacagg 124
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 100     gccgccgcggcgagggcggtcaccgc 125
               ||||||||||||||| ||||||||||
Sbjct: 1005387 gccgccgcggcgaggtcggtcaccgc 1005412
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>gb|AY541063.1| Nocardia uniformis subsp. tsuyamanensis monocyclic beta-lactam
             antibiotic nocardicin A biosynthesis gene cluster, partial
             sequence
          Length = 33451

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    cctgctcgccgccgcggcgag 113
             |||||||||||||||||||||
Sbjct: 27993 cctgctcgccgccgcggcgag 28013
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
            complete sequence
          Length = 146303

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 124  gcggcgggggccgggccgcgt 144
            |||||||||||||||||||||
Sbjct: 4951 gcggcgggggccgggccgcgt 4971
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
             OSJNBa0065A15, complete sequence
          Length = 168806

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    cctgctcgccgccgcggcgag 113
             |||||||||||||||||||||
Sbjct: 92430 cctgctcgccgccgcggcgag 92410
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>gb|AY658768.1| Synthetic construct Peudomonas aeruginosa clone FLH034212.01F
           PA3651 gene, partial cds
          Length = 816

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  cgctgctcctggccctgctcg 100
           |||||||||||||||||||||
Sbjct: 602 cgctgctcctggccctgctcg 622
to top
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21,
              complete sequence
          Length = 151267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    gcggcgggggccgggccgcgt 144
              |||||||||||||||||||||
Sbjct: 122773 gcggcgggggccgggccgcgt 122793
to top
>emb|AJ402811.1|SSA402811 Salmo salar microsatellite DNA, clone 30F10UOS
          Length = 415

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  acagacagaacagacagacag 30
           |||||||||||||||||||||
Sbjct: 369 acagacagaacagacagacag 389
to top
>emb|AJ402770.1|SSA402770 Salmo salar microsatellite DNA, clone 30E1UOS
          Length = 273

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  acagacagaacagacagacag 30
           |||||||||||||||||||||
Sbjct: 140 acagacagaacagacagacag 160
to top
>gb|BT009448.1| Triticum aestivum clone wlmk8.pk0018.e8:fis, full insert mRNA
           sequence
          Length = 1560

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 207 gctcgccatcgagctcgccgtcgacgacg 235
           |||| |||||| |||||||||||||||||
Sbjct: 60  gctccccatcgtgctcgccgtcgacgacg 88
to top
>emb|BX294009.1|NC64C2 Neurospora crassa DNA linkage group V Cosmid contig 64C2
          Length = 81866

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 10   acagacagaacagacagacag 30
            |||||||||||||||||||||
Sbjct: 2642 acagacagaacagacagacag 2662
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 90    ggccctgctcgccgccgcggc 110
             |||||||||||||||||||||
Sbjct: 45553 ggccctgctcgccgccgcggc 45573



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    caacgcggaccgcacggtgc 256
              ||||||||||||||||||||
Sbjct: 125334 caacgcggaccgcacggtgc 125315
to top
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 76     atgccgctgctcctggccctg 96
              |||||||||||||||||||||
Sbjct: 169402 atgccgctgctcctggccctg 169422
to top
>emb|BX470119.17| Zebrafish DNA sequence from clone CH211-225L4 in linkage group 20,
              complete sequence
          Length = 106989

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 10     acagacagaacagacagacag 30
              |||||||||||||||||||||
Sbjct: 103011 acagacagaacagacagacag 103031
to top
>gb|AC147364.7| Medicago truncatula clone mth2-68g24, complete sequence
          Length = 109540

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 341    agaataatgtagttgctgttattgg 365
              ||||| |||||||||||||||||||
Sbjct: 102080 agaatgatgtagttgctgttattgg 102056
to top
>gb|AY069953.1| Hordeum vulgare APETALA2-like protein (AP2L1) mRNA, complete cds
          Length = 1815

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 133 gccgggccgcgtccgagcgaggtcg 157
           |||| ||||||||||||||||||||
Sbjct: 180 gccgtgccgcgtccgagcgaggtcg 156
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 220      ctcgccgtcgacgacgtcaac 240
                |||||||||||||||||||||
Sbjct: 15467183 ctcgccgtcgacgacgtcaac 15467163
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 93       cctgctcgccgccgcggcgag 113
                |||||||||||||||||||||
Sbjct: 19609355 cctgctcgccgccgcggcgag 19609335
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 124      gcggcgggggccgggccgcgt 144
                |||||||||||||||||||||
Sbjct: 19200875 gcggcgggggccgggccgcgt 19200895



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     cgccgccgcggcgagggcgg 118
              ||||||||||||||||||||
Sbjct: 683414 cgccgccgcggcgagggcgg 683395
to top
>gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 of the complete
            genome
          Length = 14537

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 80   cgctgctcctggccctgctcg 100
            |||||||||||||||||||||
Sbjct: 2845 cgctgctcctggccctgctcg 2825
to top
>gb|AF166333.1|AF166333 Myxococcus xanthus histidine protein kinase AsgD (asgD) gene,
            complete cds
          Length = 3080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 120  caccgcggcgggggccgggccgcgt 144
            |||||||||||| ||||||||||||
Sbjct: 3007 caccgcggcgggtgccgggccgcgt 3031
to top
>dbj|AP006752.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1399_D07, complete sequence
          Length = 65000

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 93    cctgctcgccgccgcggcgag 113
             |||||||||||||||||||||
Sbjct: 18837 cctgctcgccgccgcggcgag 18817
to top
>emb|AJ430047.1|MTR430047 Medicago truncatula mRNA for 1-deoxy-D-xylulose 5-phosphate
           synthase 1 (dxs1 gene)
          Length = 2302

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 341 agaataatgtagttgctgttattgg 365
           ||||| |||||||||||||||||||
Sbjct: 631 agaatgatgtagttgctgttattgg 655
to top
>dbj|AK101420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038B10, full
           insert sequence
          Length = 2126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 93  cctgctcgccgccgcggcgag 113
           |||||||||||||||||||||
Sbjct: 65  cctgctcgccgccgcggcgag 85
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 149     gcgaggtcgccgtgggcgcgc 169
               |||||||||||||||||||||
Sbjct: 3212913 gcgaggtcgccgtgggcgcgc 3212893



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      ctgctcctggccctgctcgc 101
               ||||||||||||||||||||
Sbjct: 3058684 ctgctcctggccctgctcgc 3058703
to top
>emb|BX936462.20| Zebrafish DNA sequence from clone CH211-147O6 in linkage group 20,
             complete sequence
          Length = 196432

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    acagacagaacagacagacag 30
             |||||||||||||||||||||
Sbjct: 13816 acagacagaacagacagacag 13796
to top
>gb|AY107405.1| Zea mays PCO140045 mRNA sequence
          Length = 624

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgctcctggccctgctcgccg 103
           |||||||||||||||||||||
Sbjct: 123 tgctcctggccctgctcgccg 143
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 220      ctcgccgtcgacgacgtcaac 240
                |||||||||||||||||||||
Sbjct: 15421466 ctcgccgtcgacgacgtcaac 15421446
to top
>emb|AL713911.3|CNS07YQC Oryza sativa chromosome 12, . BAC OSJNBb0066P16 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126680

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 220   ctcgccgtcgacgacgtcaac 240
             |||||||||||||||||||||
Sbjct: 35304 ctcgccgtcgacgacgtcaac 35324
to top
>dbj|D50811.1|PSECDPDS Pseudomonas aeruginosa cds gene for CDP-diglyceride synthetase,
            complete cds
          Length = 1845

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 80   cgctgctcctggccctgctcg 100
            |||||||||||||||||||||
Sbjct: 1497 cgctgctcctggccctgctcg 1517
to top
>ref|XM_478702.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 tcgccgtgggcgcgctcttc 174
           ||||||||||||||||||||
Sbjct: 650 tcgccgtgggcgcgctcttc 669
to top
>ref|XM_475078.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2535

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   cgccgccgcggcgagggcgg 118
            ||||||||||||||||||||
Sbjct: 1615 cgccgccgcggcgagggcgg 1596
to top
>ref|XM_473186.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  cgccgccgcggcgagggcgg 118
           ||||||||||||||||||||
Sbjct: 63  cgccgccgcggcgagggcgg 44
to top
>gb|AC110173.11| Mus musculus chromosome 8, clone RP24-396D19, complete sequence
          Length = 136535

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 7      cacacagacagaacagacagacagggac 34
              ||||||||||||||||| ||||| ||||
Sbjct: 112588 cacacagacagaacagaaagacacggac 112561
to top
>gb|AY540995.1| Achromobacter xylosoxidans subsp. denitrificans strain EST4002 plasmid
             pEST4011, complete sequence
          Length = 76958

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   ccgcgcggcgcggctcgcca 214
             ||||||||||||||||||||
Sbjct: 45177 ccgcgcggcgcggctcgcca 45196
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 321     cgaagcattggagctaatggagaa 344
               ||||||||||||||| ||||||||
Sbjct: 3474894 cgaagcattggagctgatggagaa 3474871
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 321    cgaagcattggagctaatggagaa 344
              ||||||||||||||| ||||||||
Sbjct: 511109 cgaagcattggagctgatggagaa 511086
to top
>gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome 15, complete sequence
          Length = 210089

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 10     acagacagaacagacagacagggacggg 37
              ||||||||| ||||||||||||||||||
Sbjct: 144931 acagacaga-cagacagacagggacggg 144905
to top
>gb|BC036819.1| Homo sapiens tubulin tyrosine ligase, mRNA (cDNA clone MGC:46235
           IMAGE:5767758), complete cds
          Length = 2070

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 gcggcgggggccgggccgcg 143
           ||||||||||||||||||||
Sbjct: 78  gcggcgggggccgggccgcg 97
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     cctcatcgcgcaggacacca 295
               ||||||||||||||||||||
Sbjct: 1585916 cctcatcgcgcaggacacca 1585897
to top
>gb|AF029344.2| Burkholderia cepacia putative transcription factor, malonate
            decarboxylase epsilon-subunit (mdcH), MdcB (mdcB), MdcG
            (mdcG), malonate decarboxylase gamma-subunit (mdcE),
            malonate decarboxylase beta-subunit (mdcD), malonate
            decarboxylase delta-subunit (mdcC), malonate
            decarboxylase alpha-subunit (mdcA), proline
            dehydrogenase/pyrroline-5-carboxylate dehydrogenase
            bifunctional protein (putA), leucine-responsive
            regulatory protein (lrp), chloride-channel protein,
            chloromuconate cycloisomerase (tfdD), indole acetamide
            hydrolase (iaaH), LysR-type transcription factor (tfdR),
            chlorocatechol 1,2-dioxygenase (tfdC), dienelactone
            hydrolase (tfdE), 2,4-dichlorophenol hydroxylase (tfdB),
            putative transport protein (tfdK),
            2,4-D/alpha-ketoglutarate dioxygenase (tfdA),
            maleylacetate reductase (tfdF), and putative transposase
            genes, complete cds; and unknown genes
          Length = 36642

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ccgcgcggcgcggctcgcca 214
            ||||||||||||||||||||
Sbjct: 9967 ccgcgcggcgcggctcgcca 9948
to top
>gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, complete sequence
          Length = 158391

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 7    cacacagacagaacagacagacagggac 34
            |||||||||||||||| |||||| ||||
Sbjct: 6909 cacacagacagaacaggcagacacggac 6936
to top
>gb|AY342322.1| Oryza sativa (japonica cultivar-group) monosaccharide transporter 6
           (MST6) mRNA, complete cds
          Length = 1590

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 tcgccgtgggcgcgctcttc 174
           ||||||||||||||||||||
Sbjct: 650 tcgccgtgggcgcgctcttc 669
to top
>emb|AL359076.16| Human DNA sequence from clone RP11-264I13 on chromosome 9 Contains the
             5' end of the SMARCA2 gene for SWI/SNF related matrix
             associated actin dependent regulator of chromatin
             subfamily a member 2 (SNF2LA), a novel gene and two CpG
             islands, complete sequence
          Length = 138859

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gcggcgggggccgggccgcg 143
             ||||||||||||||||||||
Sbjct: 10098 gcggcgggggccgggccgcg 10117
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 321    cgaagcattggagctaatggagaa 344
              ||||||||||||||| ||||||||
Sbjct: 319730 cgaagcattggagctgatggagaa 319707
to top
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 226   gtcgacgacgtcaacgcggaccgcacggtgctcgcc 261
             ||||||||||||| |||  |||||||||||| ||||
Sbjct: 43447 gtcgacgacgtcaccgcctaccgcacggtgcgcgcc 43412
to top
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     ctggccctgctcgccgccgc 107
              ||||||||||||||||||||
Sbjct: 290081 ctggccctgctcgccgccgc 290062
to top
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    cgccgccgcggcgagggcgg 118
             ||||||||||||||||||||
Sbjct: 51273 cgccgccgcggcgagggcgg 51254
to top
>emb|BX537264.9| Zebrafish DNA sequence from clone CH211-1C4 in linkage group 5, complete
              sequence
          Length = 160220

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     acagacagaacagacagaca 29
              ||||||||||||||||||||
Sbjct: 131355 acagacagaacagacagaca 131374
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 88      ctggccctgctcgccgccgcggcg 111
               ||||||| ||||||||||||||||
Sbjct: 2740896 ctggccccgctcgccgccgcggcg 2740919
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 99      cgccgccgcggcgagggcgg 118
               ||||||||||||||||||||
Sbjct: 3307734 cgccgccgcggcgagggcgg 3307715
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 99       cgccgccgcggcgagggcgg 118
                ||||||||||||||||||||
Sbjct: 25833863 cgccgccgcggcgagggcgg 25833844
to top
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete
             sequence
          Length = 90348

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gctcgccatcgagctcgccg 226
             ||||||||||||||||||||
Sbjct: 19369 gctcgccatcgagctcgccg 19388
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 84      gctcctggccctgctcgccgccgc 107
               |||||| |||||||||||||||||
Sbjct: 3896632 gctcctcgccctgctcgccgccgc 3896655



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      tggccctgctcgccgccgcg 108
               ||||||||||||||||||||
Sbjct: 3826334 tggccctgctcgccgccgcg 3826353



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 124     gcggcgggggccgggccgcg 143
               ||||||||||||||||||||
Sbjct: 2533868 gcggcgggggccgggccgcg 2533887



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 255     gctcgccggcacccggctca 274
               ||||||||||||||||||||
Sbjct: 1261777 gctcgccggcacccggctca 1261796
to top
>gb|AC012442.7| Homo sapiens BAC clone RP11-1I24 from 2, complete sequence
          Length = 173040

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gcggcgggggccgggccgcg 143
             ||||||||||||||||||||
Sbjct: 35663 gcggcgggggccgggccgcg 35682
to top
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0567H04
          Length = 181420

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    tcgccgtgggcgcgctcttc 174
              ||||||||||||||||||||
Sbjct: 105972 tcgccgtgggcgcgctcttc 105953
to top
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0038F22
          Length = 101666

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 212   ccatcgagctcgccgtcgacgacg 235
             |||||||| |||||||||||||||
Sbjct: 21131 ccatcgagttcgccgtcgacgacg 21108
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      ctggccctgctcgccgccgc 107
               ||||||||||||||||||||
Sbjct: 1144159 ctggccctgctcgccgccgc 1144178
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>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0425F02
          Length = 176979

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 212    ccatcgagctcgccgtcgacgacg 235
              |||||||| |||||||||||||||
Sbjct: 122384 ccatcgagttcgccgtcgacgacg 122361
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>dbj|AK106443.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D12, full
            insert sequence
          Length = 2781

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   cgccgccgcggcgagggcgg 118
            ||||||||||||||||||||
Sbjct: 1730 cgccgccgcggcgagggcgg 1711
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>emb|BX120008.9| Zebrafish DNA sequence from clone CH211-215G18 in linkage group 14,
             complete sequence
          Length = 221928

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gggccgggccgcgtccgagc 150
             ||||||||||||||||||||
Sbjct: 86032 gggccgggccgcgtccgagc 86051
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>gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, complete sequence
          Length = 192734

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 7      cacacagacagaacagacagacagggac 34
              |||||||||||||||| |||||| ||||
Sbjct: 146147 cacacagacagaacaggcagacacggac 146174
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 202    gcgcggctcgccatcgagctcgccgtcg 229
              ||||||||||| ||||||| ||||||||
Sbjct: 875512 gcgcggctcgcgatcgagcccgccgtcg 875485
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 72      gctgatgccgctgctcctggccctgctc 99
               ||||||||||||||| || |||||||||
Sbjct: 3696009 gctgatgccgctgctgcttgccctgctc 3696036
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gccatcgagctcgccgtcga 230
              ||||||||||||||||||||
Sbjct: 779930 gccatcgagctcgccgtcga 779911
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>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence
          Length = 99448

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ccgcgcggcgcggctcgcca 214
             ||||||||||||||||||||
Sbjct: 70954 ccgcgcggcgcggctcgcca 70935
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>emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete
            sequence
          Length = 213391

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   cagacagaacagacagacag 30
            ||||||||||||||||||||
Sbjct: 7901 cagacagaacagacagacag 7920
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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    cgccgccgcggcgagggcgg 118
             ||||||||||||||||||||
Sbjct: 28613 cgccgccgcggcgagggcgg 28594


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,337,000
Number of Sequences: 3902068
Number of extensions: 3337000
Number of successful extensions: 78123
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 73759
Number of HSP's gapped (non-prelim): 4358
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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