ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39d03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 240 bits (121), Expect = 3e-60 Identities = 265/312 (84%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 167 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 226 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 61880 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 61939 Query: 227 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 286 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 61940 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 61999 Query: 287 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 346 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 62000 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 62059 Query: 347 attatccttaagaattcactggacgcanaagattctgcaaggaaggagctgctgattcag 406 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 62060 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 62119 Query: 407 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgat-aca 465 |||||||||||| |||||| || |||||| | |||| |||||||| |||||||| || Sbjct: 62120 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 62179 Query: 466 ctaggatcttcg 477 |||||||||||| Sbjct: 62180 ctaggatcttcg 62191
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 240 bits (121), Expect = 3e-60 Identities = 265/312 (84%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 167 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 226 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 16563141 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 16563200 Query: 227 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 286 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 16563201 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 16563260 Query: 287 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 346 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 16563261 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 16563320 Query: 347 attatccttaagaattcactggacgcanaagattctgcaaggaaggagctgctgattcag 406 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 16563321 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 16563380 Query: 407 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgat-aca 465 |||||||||||| |||||| || |||||| | |||| |||||||| |||||||| || Sbjct: 16563381 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 16563440 Query: 466 ctaggatcttcg 477 |||||||||||| Sbjct: 16563441 ctaggatcttcg 16563452 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 22300197 tcccctccccctcctcctcc 22300216
>dbj|AK065625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029L11, full insert sequence Length = 3150 Score = 240 bits (121), Expect = 3e-60 Identities = 265/312 (84%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 167 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 226 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 288 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 347 Query: 227 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 286 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 348 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 407 Query: 287 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 346 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 408 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 467 Query: 347 attatccttaagaattcactggacgcanaagattctgcaaggaaggagctgctgattcag 406 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 468 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 527 Query: 407 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgat-aca 465 |||||||||||| |||||| || |||||| | |||| |||||||| |||||||| || Sbjct: 528 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 587 Query: 466 ctaggatcttcg 477 |||||||||||| Sbjct: 588 ctaggatcttcg 599
>dbj|AB011270.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta1, complete cds Length = 3115 Score = 240 bits (121), Expect = 3e-60 Identities = 265/312 (84%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 167 acagtcatggatatcactcagattctgctagctgctcagtctccagatggtaaccttcgc 226 |||| |||| |||||||||| || |||||| | ||||| ||| |||||||||||||||| Sbjct: 248 acagccatgaatatcactcaaatcctgctatcagctcaatctgcagatggtaaccttcgg 307 Query: 227 tcagcagcagaagccaacatcaagcagttccaggagcagaatcttcccaacttcctccta 286 || |||||||| ||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 308 gtagtagcagaagggaacctcaagcagttccaggagcagaatcttcccaacttccttctc 367 Query: 287 tccttgtcggtggagttatcgaatgatgaaaggccaccagagtctagaagacttgctggt 346 |||||||| ||||| | ||| || |||||| ||||||||||||||| ||||||||||| Sbjct: 368 tccttgtcagtggaactttcggataatgaaaaaccaccagagtctagacgacttgctggt 427 Query: 347 attatccttaagaattcactggacgcanaagattctgcaaggaaggagctgctgattcag 406 |||||||||||||| || |||| ||| | |||||||||| ||||| || ||||||||| Sbjct: 428 attatccttaagaactccttggatgcaaaggattctgcaaaaaaggaactactgattcag 487 Query: 407 caatgggtcagcttggatcactcgatcaaatcgcagattaaggagtcattgctgat-aca 465 |||||||||||| |||||| || |||||| | |||| |||||||| |||||||| || Sbjct: 488 caatgggtcagcctggatccatcaatcaaacagaagataaaggagtccttgctgataacg 547 Query: 466 ctaggatcttcg 477 |||||||||||| Sbjct: 548 ctaggatcttcg 559
>emb|Y15226.1|OSIMPB2 Oryza sativa mRNA for importin beta-like protein Imb2 Length = 2838 Score = 224 bits (113), Expect = 2e-55 Identities = 245/288 (85%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 191 ctgctagctgctcagtctccagatggtaaccttcgctcagcagcagaagccaacatcaag 250 |||||| | ||||| ||| |||||||||||||||| || |||||||| ||| ||||| Sbjct: 8 ctgctatcagctcaatctgcagatggtaaccttcgggtagtagcagaagggaacctcaag 67 Query: 251 cagttccaggagcagaatcttcccaacttcctcctatccttgtcggtggagttatcgaat 310 |||||||||||||||||||||||||||||||| || |||||||| ||||| | ||| || Sbjct: 68 cagttccaggagcagaatcttcccaacttccttctctccttgtcagtggaactttcggat 127 Query: 311 gatgaaaggccaccagagtctagaagacttgctggtattatccttaagaattcactggac 370 |||||| ||||||||||||||| ||||||||||||||||||||||||| || |||| Sbjct: 128 aatgaaaaaccaccagagtctagacgacttgctggtattatccttaagaactccttggat 187 Query: 371 gcanaagattctgcaaggaaggagctgctgattcagcaatgggtcagcttggatcactcg 430 ||| | |||||||||| ||||| || ||||||||||||||||||||| |||||| || Sbjct: 188 gcaaaggattctgcaaaaaaggaactactgattcagcaatgggtcagcctggatccatca 247 Query: 431 atcaaatcgcagattaaggagtcattgctgat-acactaggatcttcg 477 |||||| | |||| |||||||| |||||||| || |||||||||||| Sbjct: 248 atcaaacagaagataaaggagtccttgctgataacgctaggatcttcg 295
>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence Length = 245367 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 49 cccctattcccctccccctcctcct 73 ||||||||||||||||||||||||| Sbjct: 120988 cccctattcccctccccctcctcct 121012
>dbj|AP000721.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-91L24, complete sequence Length = 124636 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 36 gccgccggcgctgcccctattcccctccccctcctcc 72 ||||| ||||||| |||| |||||||||||||||||| Sbjct: 70745 gccgctggcgctggccctcttcccctccccctcctcc 70781
>gb|AC010723.3|AC010723 Homo sapiens BAC clone RP11-139C10 from Y, complete sequence Length = 174420 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgcagtcttcttc 87 |||||||||||||||||||| || |||||||| Sbjct: 74808 tcccctccccctcctcctcctcattcttcttc 74839
>ref|XM_467960.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1106 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 383 cccctccccctcctcctccgcag 361
>gb|BC078692.1| Rattus norvegicus testis-specific gene including a ubiquitin-likely domain, mRNA (cDNA clone MGC:93072 IMAGE:7112281), complete cds Length = 1026 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 62 gcgggcaggcgagcgagcgagcg 84
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 173 atggatatcactcagattctgctagctgctcagtc 207 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 10255004 atggatatcacacaggttctgctagctgcgcagtc 10254970 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 31375246 tcccctccccctcctcctccgc 31375267 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 14217224 ttcccctccccctcctcctc 14217243 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 8847733 tcccctccccctcctcctcc 8847714
>ref|XM_975780.1| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis) (Anubl1), mRNA Length = 2536 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 27 gcgggcaggcgagcgagcgagcg 49
>ref|XM_892874.2| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), transcript variant 2 (Anubl1), mRNA Length = 2536 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 27 gcgggcaggcgagcgagcgagcg 49
>ref|XM_917486.2| PREDICTED: Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), transcript variant 7 (Anubl1), mRNA Length = 2536 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 27 gcgggcaggcgagcgagcgagcg 49
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 173 atggatatcactcagattctgctagctgctcagtc 207 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 116417 atggatatcacacaggttctgctagctgcgcagtc 116383
>dbj|AK089032.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430036P15 product:RSD-7 homolog [Rattus norvegicus], full insert sequence Length = 3087 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 41 gcgggcaggcgagcgagcgagcg 63
>gb|AC154360.3| Mus musculus BAC clone RP23-167I5 from chromosome 14, complete sequence Length = 198179 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 49 cccctattcccctccccctcctcctcc 75 ||||| ||||||||||||||||||||| Sbjct: 16384 cccctcttcccctccccctcctcctcc 16358
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 173 atggatatcactcagattctgctagctgctcagtc 207 ||||||||||| ||| ||||||||||||| ||||| Sbjct: 10253105 atggatatcacacaggttctgctagctgcgcagtc 10253071 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 31465762 tcccctccccctcctcctccgc 31465783 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 14212199 ttcccctccccctcctcctc 14212218 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 8845568 tcccctccccctcctcctcc 8845549
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 32285646 cccctccccctcctcctccgcag 32285668 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 20128654 cccctccccctcctcctccgcag 20128632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 9847453 ttcccctccccctcctcctcc 9847433
>gb|AC154197.1| Mus musculus BAC clone RP24-78I22 from chromosome 14, complete sequence Length = 201042 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 49 cccctattcccctccccctcctcctcc 75 ||||| ||||||||||||||||||||| Sbjct: 151565 cccctcttcccctccccctcctcctcc 151539
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 129659 cccctccccctcctcctccgcag 129681
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 1960 cccctccccctcctcctccgcag 1938
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 77177 cccctccccctcctcctccgcag 77155
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 61478 cccctccccctcctcctccgcag 61500
>dbj|AK067075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091G15, full insert sequence Length = 1106 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgcag 79 ||||||||||||||||||||||| Sbjct: 383 cccctccccctcctcctccgcag 361
>gb|BC048508.1| Mus musculus AN1, ubiquitin-like, homolog (Xenopus laevis), mRNA (cDNA clone IMAGE:6774262), complete cds Length = 905 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 1 gcgggcaggcgagcgagcgagcg 23
>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence Length = 190156 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 102 gcgggcaggcgagcgagcgagcg 124 ||||||||||||||||||||||| Sbjct: 55541 gcgggcaggcgagcgagcgagcg 55519
>ref|XM_469891.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1278 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 56 tcccctccccctcctcctccgc 77
>ref|XM_479027.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2281 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 117 tcccctccccctcctcctccgc 138
>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188027 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 ccctattcccctccccctcctcctcc 75 |||| ||||||||||||||||||||| Sbjct: 21932 ccctcttcccctccccctcctcctcc 21907
>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence Length = 221564 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctccg 76 |||||||||||||||||||||| Sbjct: 156292 ttcccctccccctcctcctccg 156313
>ref|XM_959307.1| Neurospora crassa OR74A hypothetical protein (NCU00747.1) partial mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 176 tcccctccccctcctcctccgc 197
>ref|XM_324926.1| Neurospora crassa OR74A hypothetical protein (NCU00747.1) partial mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 176 tcccctccccctcctcctccgc 197
>gb|AC126805.4| Mus musculus BAC clone RP23-109A15 from 13, complete sequence Length = 177083 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 tattcccctccccctcctcctc 74 |||||||||||||||||||||| Sbjct: 24963 tattcccctccccctcctcctc 24984
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gcgggcaggcgagcgagcgagc 123 |||||||||||||||||||||| Sbjct: 85052 gcgggcaggcgagcgagcgagc 85031
>emb|AL121758.24|HSDJ850E9 Human DNA sequence from clone RP5-850E9 on chromosome 20 Contains part of the gene for a novel C2H2 type zinc finger protein similar to Drosophila Scratch (Scrt), Slug and Xenopus Snail, the C20orf139 gene for a novel protein similar to Drosophila CG6762 and five CpG islands, complete sequence Length = 114791 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 attcccctccccctcctcctcc 75 |||||||||||||||||||||| Sbjct: 49590 attcccctccccctcctcctcc 49611
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 120554 tcccctccccctcctcctccgc 120533
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 gcgggcaggcgagcgagcgagc 123 |||||||||||||||||||||| Sbjct: 190959 gcgggcaggcgagcgagcgagc 190938
>gb|AC153130.4| Mus musculus BAC clone RP24-252F22 from chromosome 13, complete sequence Length = 186412 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 tattcccctccccctcctcctc 74 |||||||||||||||||||||| Sbjct: 125233 tattcccctccccctcctcctc 125254
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 24398169 tcccctccccctcctcctccgc 24398190 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 cccgcctctaaaccctagccgccg 42 |||||||| ||||||||||||||| Sbjct: 3882388 cccgcctcgaaaccctagccgccg 3882411
>gb|BC093551.1| Xenopus laevis Sox-D protein, mRNA (cDNA clone MGC:115030 IMAGE:6946836), complete cds Length = 1160 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 60 tcccctccccctcctcctccgc 39
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 24036 tcccctccccctcctcctccgc 24057
>gb|AC158804.3| Mus musculus 10 BAC RP24-354M22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151309 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 ccctattcccctccccctcctcctcc 75 |||| ||||||||||||||||||||| Sbjct: 80012 ccctcttcccctccccctcctcctcc 79987
>dbj|AK069667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027N04, full insert sequence Length = 2281 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgc 77 |||||||||||||||||||||| Sbjct: 117 tcccctccccctcctcctccgc 138
>gb|AC152961.2| Mus musculus 6 BAC RP23-4H14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227467 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgcagtc 81 |||||||||||||||||||| ||||| Sbjct: 129453 tcccctccccctcctcctccccagtc 129478
>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete sequence Length = 196568 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 50 ccctattcccctccccctcctcctcc 75 |||||| ||||||||||||||||||| Sbjct: 121423 ccctatccccctccccctcctcctcc 121398
>gb|BC088749.1| Mus musculus tubulin, beta 3, mRNA (cDNA clone MGC:103107 IMAGE:6307387), complete cds Length = 1756 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1349 ctccccctcctcctccgcagt 1329
>gb|AC091470.16| Mus musculus chromosome 3, clone RP23-237K2, complete sequence Length = 141824 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 27208 ttcccctccccctcctcctcc 27188
>gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, complete sequence Length = 230898 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 66881 ttcccctccccctcctcctcc 66861
>gb|AC159317.3| Mus musculus BAC clone RP23-76I20 from chromosome 16, complete sequence Length = 224160 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 613 ttcccctccccctcctcctcc 593
>gb|AC166105.4| Mus musculus BAC clone RP23-251L22 from chromosome 14, complete sequence Length = 231837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 69647 ttcccctccccctcctcctcc 69667
>gb|AC005751.1| Homo sapiens chromosome 16, BAC clone 375G12 (LANL), complete sequence Length = 162822 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 122154 ttcccctccccctcctcctcc 122174 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 122128 ttcccctccccctcctcctcc 122148 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 122180 ttcccctccccctcctcctc 122199
>gb|AC137104.11| Mus musculus chromosome 1, clone RP23-241K20, complete sequence Length = 171622 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 20610 ttcccctccccctcctcctcc 20590
>gb|AC102499.10| Mus musculus chromosome 1, clone RP24-151M13, complete sequence Length = 184760 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 45469 ttcccctccccctcctcctcc 45449
>gb|AC154882.11| Mus musculus chromosome 3, clone RP24-187P10, complete sequence Length = 175586 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 48021 ttcccctccccctcctcctcc 48041
>gb|AC160765.4| Mus musculus BAC clone RP23-26O24 from chromosome 13, complete sequence Length = 234761 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 57514 ttcccctccccctcctcctcc 57534
>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence Length = 179746 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 168090 ttcccctccccctcctcctcc 168070
>gb|AC124110.8| Mus musculus chromosome 1, clone RP24-343C13, complete sequence Length = 149487 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 126652 ttcccctccccctcctcctcc 126632
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 254252 ttcccctccccctcctcctcc 254272
>gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, complete sequence Length = 192856 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 182938 ttcccctccccctcctcctcc 182918
>gb|AC130828.4| Mus musculus BAC clone RP23-406H14 from chromosome 6, complete sequence Length = 182673 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 167507 ttcccctccccctcctcctcc 167487
>ref|NM_023279.2| Mus musculus tubulin, beta 3 (Tubb3), mRNA Length = 1758 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1347 ctccccctcctcctccgcagt 1327
>gb|BC031357.1| Mus musculus tubulin, beta 3, mRNA (cDNA clone MGC:35812 IMAGE:5363050), complete cds Length = 1758 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1347 ctccccctcctcctccgcagt 1327
>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence Length = 180633 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 15574 ttcccctccccctcctcctcc 15554
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 64015 ttcccctccccctcctcctcc 64035
>gb|AC113028.15| Mus musculus chromosome 5, clone RP23-205D3, complete sequence Length = 275646 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 121305 ttcccctccccctcctcctcc 121285
>gb|AC109204.21| Mus musculus chromosome 17, clone RP23-55J9, complete sequence Length = 245496 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 14640 ttcccctccccctcctcctcc 14620
>gb|AC127232.4| Mus musculus chromosome 15 clone RP24-555P18, complete sequence Length = 190930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 8792 ttcccctccccctcctcctcc 8812
>ref|XM_993152.1| PREDICTED: Mus musculus radial spokehead-like 3 (Rshl3), mRNA Length = 3605 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgcagt 80 ||||||||||||||||||| ||||| Sbjct: 244 tcccctccccctcctcctctgcagt 268
>ref|XM_906805.2| PREDICTED: Mus musculus radial spokehead-like 3 (Rshl3), mRNA Length = 3605 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgcagt 80 ||||||||||||||||||| ||||| Sbjct: 244 tcccctccccctcctcctctgcagt 268
>ref|XM_137041.6| PREDICTED: Mus musculus radial spokehead-like 3 (Rshl3), mRNA Length = 3605 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctccgcagt 80 ||||||||||||||||||| ||||| Sbjct: 244 tcccctccccctcctcctctgcagt 268
>gb|AC009135.12| Homo sapiens chromosome 16 clone RP11-509E10, complete sequence Length = 221640 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 130685 ttcccctccccctcctcctcc 130665 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 130659 ttcccctccccctcctcctcc 130639 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 130633 ttcccctccccctcctcctc 130614
>gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosome 13, complete sequence Length = 227411 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 51 cctattcccctccccctcctcctcc 75 ||||||||||||| ||||||||||| Sbjct: 14805 cctattcccctcctcctcctcctcc 14781
>gb|AC122266.2| Mus musculus BAC clone RP23-213K18 from 8, complete sequence Length = 195246 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 140536 ctccccctcctcctccgcagt 140516
>gb|AC112793.5| Mus musculus BAC clone RP23-410D16 from chromosome 2, complete sequence Length = 191286 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 59167 ttcccctccccctcctcctcc 59147
>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence Length = 230940 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 cctattcccctccccctcctcctcc 75 ||||||||||||| ||||||||||| Sbjct: 71366 cctattcccctcctcctcctcctcc 71390
>gb|AC110882.13| Mus musculus chromosome 18, clone RP23-287A10, complete sequence Length = 203782 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 191985 ttcccctccccctcctcctcc 191965 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 179677 ttcccctccccctcctcctcc 179657
>gb|AC116748.8| Mus musculus chromosome 9, clone RP23-80L8, complete sequence Length = 268886 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 165842 ttcccctccccctcctcctcc 165862
>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence Length = 193390 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 69510 ttcccctccccctcctcctcc 69530
>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence Length = 216331 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 14255 ttcccctccccctcctcctcc 14235 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 1947 ttcccctccccctcctcctcc 1927
>gb|AC158991.2| Mus musculus BAC clone RP24-488G14 from chromosome 7, complete sequence Length = 210271 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 74091 ttcccctccccctcctcctcc 74071
>gb|AC158362.5| Mus musculus BAC clone RP23-214K5 from chromosome 8, complete sequence Length = 201185 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 109573 ctccccctcctcctccgcagt 109593
>emb|AL591163.22| Human DNA sequence from clone RP11-242F24 on chromosome 1 Contains a novel gene and a CpG island, complete sequence Length = 71819 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 45058 ttcccctccccctcctcctcc 45078
>gb|AC114543.10| Mus musculus, clone RP24-107C11, complete sequence Length = 191639 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 49696 ttcccctccccctcctcctcc 49676
>gb|AC129555.29| Mus musculus chromosome 5, clone RP24-90F19, complete sequence Length = 242141 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 180524 ttcccctccccctcctcctcc 180504
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ccctattcccctccccctcctcctc 74 |||||||||| |||||||||||||| Sbjct: 173850 ccctattcccttccccctcctcctc 173874
>emb|AL596264.13| Mouse DNA sequence from clone RP23-232G8 on chromosome 11 Contains a novel gene, complete sequence Length = 175724 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 156283 ttcccctccccctcctcctcc 156263 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 156249 ttcccctccccctcctcctcc 156229
>dbj|AK149014.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120476D15 product:tubulin, beta 3, full insert sequence Length = 1733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1359 ctccccctcctcctccgcagt 1339
>gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, complete sequence Length = 212973 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 86190 ttcccctccccctcctcctcc 86210
>dbj|AK143370.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330018H16 product:unclassifiable, full insert sequence Length = 3010 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 1410 ttcccctccccctcctcctcc 1430
>gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosome 6, complete sequence Length = 181390 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 7032 ttcccctccccctcctcctcc 7052
>gb|AC159632.2| Mus musculus BAC clone RP24-161A16 from chromosome 12, complete sequence Length = 181229 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 69220 ttcccctccccctcctcctcc 69240
>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence Length = 182542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 92066 ttcccctccccctcctcctcc 92046
>gb|AC159231.2| Mus musculus BAC clone RP24-387F20 from chromosome 13, complete sequence Length = 150809 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 89993 ttcccctccccctcctcctcc 89973
>gb|AC140419.8| Mus musculus BAC clone RP24-435P9 from chromosome 3, complete sequence Length = 157093 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 125670 ttcccctccccctcctcctcc 125650 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 125453 ttcccctccccctcctcctcc 125433
>gb|AF390899.1|AF390897S3 Mus musculus germ cell nuclear factor (Nr6a1) gene, exons 4 and 5 Length = 12221 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 11755 ttcccctccccctcctcctcc 11775
>dbj|AK051298.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130031O03 product:tubulin, beta 3, full insert sequence Length = 1732 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1359 ctccccctcctcctccgcagt 1339
>gb|AC087166.3|AC087166 Mus musculus strain C57BL/6J chromosome 12 clone RP23-354D10, complete sequence Length = 210476 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 13189 ttcccctccccctcctcctcc 13209
>gb|AC004463.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 79h12 In DGCR Region, complete sequence Length = 38254 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 11658 ttcccctccccctcctcctcc 11678
>dbj|AK012528.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700078D11 product:tubulin, beta 3, full insert sequence Length = 1734 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1362 ctccccctcctcctccgcagt 1342
>dbj|AK082942.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530009K02 product:tubulin, beta 3, full insert sequence Length = 1729 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1358 ctccccctcctcctccgcagt 1338
>gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168376 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 20765 ttcccctccccctcctcctcc 20745
>gb|AC155724.8| Mus musculus 6 BAC RP24-132K20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 196715 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 144597 ttcccctccccctcctcctcc 144617
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 85346 ttcccctccccctcctcctcc 85326
>dbj|AK014302.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3200002H15 product:tubulin, beta 3, full insert sequence Length = 1032 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 660 ctccccctcctcctccgcagt 640
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgc 77 ||||||||||||||||||||| Sbjct: 22490983 cccctccccctcctcctccgc 22491003 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcag 79 |||||||||||||||||||| Sbjct: 9921443 ctccccctcctcctccgcag 9921424
>gb|AC026384.19|AC026384 Mus musculus 11 BAC RP23-390D17 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 177428 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 50 ccctattcccctccccctcctcctc 74 |||||||||| |||||||||||||| Sbjct: 91493 ccctattcccttccccctcctcctc 91517
>gb|AC013413.6| Homo sapiens BAC clone RP11-538J11 from 2, complete sequence Length = 118847 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 62962 ttcccctccccctcctcctcc 62942
>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete sequence Length = 177253 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 9205 ttcccctccccctcctcctcc 9185
>gb|AF312873.1|AF312873 Mus musculus tubulin beta-3 mRNA, complete cds Length = 1705 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcagt 80 ||||||||||||||||||||| Sbjct: 1330 ctccccctcctcctccgcagt 1310
>gb|AC129181.4| Mus musculus chromosome UL clone RP23-325P17, complete sequence Length = 204520 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 47 tgcccctattcccctccccctcctcctcc 75 |||| |||||| ||||||||||||||||| Sbjct: 156433 tgcctctattctcctccccctcctcctcc 156461
>gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosome 6, complete sequence Length = 216956 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 60191 ttcccctccccctcctcctcc 60171
>gb|AF020583.1|AF020583 Zamia furfuracea cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 aggagctgctgattcagcaat 410 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AF020577.1|AF020577 Stangeria eriopus cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 aggagctgctgattcagcaat 410 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AF020563.1|AF020563 Encephalartos lebomboensis cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 aggagctgctgattcagcaat 410 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>gb|AF020562.1|AF020562 Cycas revoluta cytochrome c oxidase (coxI) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 1415 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 aggagctgctgattcagcaat 410 ||||||||||||||||||||| Sbjct: 326 aggagctgctgattcagcaat 346
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0521F09 Length = 164823 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 28415 ttcccctccccctcctcctcc 28395
>emb|BX546465.7| Mouse DNA sequence from clone RP23-167N13 on chromosome 2, complete sequence Length = 81064 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 tattcccctccccctcctcct 73 ||||||||||||||||||||| Sbjct: 2597 tattcccctccccctcctcct 2577
>dbj|AK120913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034G08, full insert sequence Length = 1966 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 127 ttcccctccccctcctcctcc 107
>gb|AC153961.2| Mus musculus 10 BAC RP24-330I16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159792 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctccgcagt 80 ||||||||||||||||||| ||||| Sbjct: 21609 tcccctccccctcctcctctgcagt 21585
>dbj|AK110395.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-F01, full insert sequence Length = 2844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgc 77 ||||||||||||||||||||| Sbjct: 2397 cccctccccctcctcctccgc 2377
>gb|AC155306.2| Mus musculus BAC clone RP24-211K15 from 13, complete sequence Length = 153008 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 125122 ttcccctccccctcctcctcc 125102
>gb|AC101945.33| Mus musculus chromosome 15, clone RP24-123O20, complete sequence Length = 184305 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 83914 ttcccctccccctcctcctcc 83894
>gb|AC138306.4| Mus musculus BAC clone RP24-240E9 from 16, complete sequence Length = 170196 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 73434 ttcccctccccctcctcctcc 73454
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 702437 ttcccctccccctcctcctcc 702457 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 916000 tcccctccccctcctcctcc 916019
>emb|AL133454.6|CNS01DV5 Human chromosome 14 DNA sequence BAC R-580E16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165159 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 106419 ttcccctccccctcctcctcc 106399
>gb|AC107780.12| Mus musculus chromosome 8, clone RP23-61O10, complete sequence Length = 244047 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 138731 ttcccctccccctcctcctcc 138711
>gb|AC164412.9| Mus musculus chromosome 3, clone RP24-360M7, complete sequence Length = 172583 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 161787 ttcccctccccctcctcctcc 161807
>gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183830 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 117731 ttcccctccccctcctcctcc 117751
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgc 77 ||||||||||||||||||||| Sbjct: 22419328 cccctccccctcctcctccgc 22419348 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcag 79 |||||||||||||||||||| Sbjct: 9921328 ctccccctcctcctccgcag 9921309
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 188733 ttcccctccccctcctcctcc 188753
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgc 77 ||||||||||||||||||||| Sbjct: 16551 cccctccccctcctcctccgc 16531
>gb|AC164609.4| Mus musculus BAC clone RP24-350F17 from chromosome 12, complete sequence Length = 198167 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 156242 ttcccctccccctcctcctcc 156262
>gb|AC135353.3| Mus musculus BAC clone RP24-401C17 from 9, complete sequence Length = 132290 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 ccctattcccctccccctcctcctc 74 |||| |||||||||||||||||||| Sbjct: 90821 cccttttcccctccccctcctcctc 90797
>emb|CT009604.11| Mouse DNA sequence from clone RP23-4J22 on chromosome 13, complete sequence Length = 209356 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 141714 ttcccctccccctcctcctcc 141734
>emb|CT030241.6| Mouse DNA sequence from clone RP23-377I11 on chromosome 12, complete sequence Length = 216916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 46745 ttcccctccccctcctcctcc 46725
>gb|AC171325.5| Mus musculus chromosome 3, clone RP23-124B15, complete sequence Length = 191795 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 113192 ttcccctccccctcctcctcc 113212
>emb|AL772249.6| Mouse DNA sequence from clone RP23-430H1 on chromosome 2, complete sequence Length = 204907 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 attcccctccccctcctcctc 74 ||||||||||||||||||||| Sbjct: 66099 attcccctccccctcctcctc 66119
>emb|AL606745.11| Mouse DNA sequence from clone RP23-32L6 on chromosome 3, complete sequence Length = 192332 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 179050 ttcccctccccctcctcctcc 179070
>emb|AL732468.10| Mouse DNA sequence from clone RP23-149P17 on chromosome 2, complete sequence Length = 180645 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctcc 75 ||||||||||||||||||||| Sbjct: 46386 ttcccctccccctcctcctcc 46366
>gb|AC105301.44| Mus musculus strain C57BL/6J clone rp23-317h14 map 17, complete sequence Length = 208029 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 63297 tcccctccccctcctcctcc 63316
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccctattcccctccccctcc 69 |||||||||||||||||||| Sbjct: 142717 ccctattcccctccccctcc 142698
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 20139 tcccctccccctcctcctcc 20158
>gb|AC137127.11| Mus musculus chromosome 9, clone RP24-264F17, complete sequence Length = 181842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 72148 tcccctccccctcctcctcc 72129
>gb|AC114554.8| Mus musculus chromosome 5, clone RP23-414E14, complete sequence Length = 204467 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 194779 tcccctccccctcctcctcc 194798
>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence Length = 193998 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 115268 tcccctccccctcctcctcc 115249
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cccctattcccctccccctc 68 |||||||||||||||||||| Sbjct: 6004 cccctattcccctccccctc 5985
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 175247 ttcccctccccctcctcctc 175266
>gb|AC166649.5| Mus musculus chromosome 5, clone RP23-379D24, complete sequence Length = 176315 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 15874 tcccctccccctcctcctcc 15855
>ref|XM_476782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2040 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 cccgcctctaaaccctagccgccg 42 |||||||| ||||||||||||||| Sbjct: 89 cccgcctcgaaaccctagccgccg 66
>ref|XM_507353.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.23-2 mRNA Length = 2082 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 cccgcctctaaaccctagccgccg 42 |||||||| ||||||||||||||| Sbjct: 89 cccgcctcgaaaccctagccgccg 66
>ref|XM_506190.1| PREDICTED Oryza sativa (japonica cultivar-group), P0496D04.23-2 mRNA Length = 2082 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 cccgcctctaaaccctagccgccg 42 |||||||| ||||||||||||||| Sbjct: 89 cccgcctcgaaaccctagccgccg 66
>ref|XM_472010.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1902 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 161 tcccctccccctcctcctcc 180
>gb|AC116409.9| Mus musculus chromosome 3, clone RP24-337P23, complete sequence Length = 162232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 57567 tcccctccccctcctcctcc 57586
>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence Length = 218995 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctattcccctccccctcctcctcc 75 |||||||||||| ||||||||||| Sbjct: 137975 ctattcccctcctcctcctcctcc 137952
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 cccctccccctcctcctccgcagt 80 ||||||| |||||||||||||||| Sbjct: 237045 cccctcctcctcctcctccgcagt 237022
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 aggcgggcaggcgagcgagc 119 |||||||||||||||||||| Sbjct: 82017 aggcgggcaggcgagcgagc 81998
>gb|AC163207.6| Mus musculus chromosome 1, clone RP24-137J11, complete sequence Length = 169102 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 132633 tcccctccccctcctcctcc 132652
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 143462 tcccctccccctcctcctcc 143481
>gb|AC109509.20| Mus musculus chromosome 14, clone RP23-16M15, complete sequence Length = 216410 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 87287 tcccctccccctcctcctcc 87268
>gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, complete sequence Length = 172482 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 4570 tcccctccccctcctcctcc 4589
>gb|AC128597.3| Rattus norvegicus BAC CH230-62C6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 198520 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 127215 tcccctccccctcctcctcc 127234 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 70359 tcccctccccctcctcctcc 70340
>gb|AC097447.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0042K08, complete sequence Length = 117839 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 ctccccctcctcctccgcag 79 |||||||||||||||||||| Sbjct: 23710 ctccccctcctcctccgcag 23691
>gb|AC131767.4| Mus musculus BAC clone RP24-284N10 from chromosome 12, complete sequence Length = 150631 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 130971 ttcccctccccctcctcctc 130952
>gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosome 7, complete sequence Length = 198504 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 22317 tcccctccccctcctcctcc 22298
>gb|AC165961.2| Mus musculus BAC clone RP23-378M19 from chromosome 16, complete sequence Length = 211284 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgcagtcttcttcc 88 ||||||||||||||||||| | ||||||||| Sbjct: 126890 cccctccccctcctcctcctccttcttcttcc 126921 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 58352 tcccctccccctcctcctcc 58333
>gb|AC166082.11| Mus musculus 10 BAC RP23-150M2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170819 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 7213 ttcccctccccctcctcctc 7232
>gb|AC121297.20| Mus musculus chromosome 1, clone RP23-326H11, complete sequence Length = 207496 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 126759 tcccctccccctcctcctcc 126740
>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02, complete sequence Length = 131860 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 1832 tcccctccccctcctcctcc 1851
>gb|AF100669.1| Caenorhabditis elegans cosmid R11E3, complete sequence Length = 38681 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cttcttccatttgtctggga 100 |||||||||||||||||||| Sbjct: 1285 cttcttccatttgtctggga 1266
>gb|AC115878.12| Mus musculus chromosome 15, clone RP24-358G9, complete sequence Length = 173049 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 1129 tcccctccccctcctcctcc 1110
>gb|AC117570.11| Mus musculus chromosome 9, clone RP23-18M12, complete sequence Length = 238598 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 106704 ttcccctccccctcctcctc 106685
>ref|XM_960466.1| Neurospora crassa OR74A hypothetical protein (NCU02877.1) partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cctccccctcctcctccgca 78 |||||||||||||||||||| Sbjct: 2282 cctccccctcctcctccgca 2263
>gb|AC111135.10| Mus musculus chromosome 9, clone RP23-349N4, complete sequence Length = 215213 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 198627 tcccctccccctcctcctcc 198646
>gb|AC140364.4| Mus musculus BAC clone RP24-75K5 from chromosome 5, complete sequence Length = 234652 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 116614 tcccctccccctcctcctcc 116633
>gb|AC113957.8| Mus musculus chromosome 15, clone RP23-452M1, complete sequence Length = 168824 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 157018 tcccctccccctcctcctcc 156999
>ref|XM_330064.1| Neurospora crassa OR74A hypothetical protein (NCU02877.1) partial mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cctccccctcctcctccgca 78 |||||||||||||||||||| Sbjct: 2282 cctccccctcctcctccgca 2263
>gb|AC113438.17| Mus musculus chromosome 6, clone RP23-191I2, complete sequence Length = 221969 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 198105 tcccctccccctcctcctcc 198124
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 86441 tcccctccccctcctcctcc 86422
>gb|AC147044.2| Mus musculus BAC clone RP23-106B19 from chromosome 14, complete sequence Length = 181146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 23875 tcccctccccctcctcctcc 23894
>gb|AC127417.3| Mus musculus BAC clone RP23-459M2 from chromosome 10, complete sequence Length = 192814 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 cccctattcccctccccctcctcc 72 ||||| |||||||||||||||||| Sbjct: 181646 cccctcttcccctccccctcctcc 181623
>gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, complete sequence Length = 204286 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 87455 tcccctccccctcctcctcc 87436
>gb|AC168220.1| Mus musculus BAC clone RP23-77O10 from chromosome 16, complete sequence Length = 215265 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgcagtcttcttcc 88 ||||||||||||||||||| | ||||||||| Sbjct: 23385 cccctccccctcctcctcctccttcttcttcc 23416
>gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 cctattcccctccccctcctcctc 74 |||||||||||||||||| ||||| Sbjct: 165332 cctattcccctccccctcttcctc 165355
>gb|AC153504.6| Mus musculus 10 BAC RP23-324E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200051 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 171264 tcccctccccctcctcctcc 171283
>gb|AC161829.5| Mus musculus 10 BAC RP23-304K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196522 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 8609 tcccctccccctcctcctcc 8590
>ref|XM_974153.1| PREDICTED: Mus musculus hypothetical protein LOC665045 (LOC665045), mRNA Length = 426 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctattcccctccccctcctcctcc 75 |||||| ||||||||||||||||| Sbjct: 376 ctattctcctccccctcctcctcc 353
>gb|AC140982.2| Mus musculus BAC clone RP23-171L7 from chromosome 16, complete sequence Length = 208232 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 129534 ttcccctccccctcctcctc 129515
>gb|AC146296.3| Mus musculus BAC clone RP23-277D1 from chromosome 9, complete sequence Length = 177641 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 137933 tcccctccccctcctcctcc 137952
>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete sequence Length = 202415 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctattcccctccccctcctcctcc 75 |||||||||||| ||||||||||| Sbjct: 100874 ctattcccctcctcctcctcctcc 100851
>emb|Z83219.1|CEC31C9 Caenorhabditis elegans Cosmid C31C9, complete sequence Length = 41100 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cttcttccatttgtctggga 100 |||||||||||||||||||| Sbjct: 10981 cttcttccatttgtctggga 10962
>gb|AC099948.9| Mus musculus chromosome 10, clone RP23-19D21, complete sequence Length = 203086 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 116302 ttcccctccccctcctcctc 116321
>gb|AC133176.2| Mus musculus BAC clone RP24-111D1 from chromosome 14, complete sequence Length = 171069 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 35366 tcccctccccctcctcctcc 35347
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 167436 tcccctccccctcctcctcc 167455
>gb|AC131703.3| Mus musculus BAC clone RP24-141B8 from chromosome 9, complete sequence Length = 135770 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 129576 tcccctccccctcctcctcc 129557
>gb|BC061828.1| Rattus norvegicus cDNA clone IMAGE:5599715, partial cds Length = 3356 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gcagaatcttcccaacttcc 281 |||||||||||||||||||| Sbjct: 1730 gcagaatcttcccaacttcc 1749
>gb|AC116997.3| Mus musculus BAC clone RP23-8J15 from chromosome 1, complete sequence Length = 190712 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 114766 tcccctccccctcctcctcc 114785
>gb|AC131752.3| Mus musculus BAC clone RP23-21D6 from chromosome 5, complete sequence Length = 203321 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 110003 ttcccctccccctcctcctc 110022
>gb|AC124579.3| Mus musculus BAC clone RP23-86P2 from chromosome 13, complete sequence Length = 167801 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 71595 tcccctccccctcctcctcc 71614
>gb|AC126942.4| Mus musculus BAC clone RP23-174P9 from chromosome 17, complete sequence Length = 182423 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 123018 tcccctccccctcctcctcc 123037
>gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosome 19, complete sequence Length = 168526 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 135273 tcccctccccctcctcctcc 135292
>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 95157 tcccctccccctcctcctcc 95138
>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence Length = 138622 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 23544 tcccctccccctcctcctcc 23563 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 23457 tcccctccccctcctcctcc 23476
>gb|AC126043.3| Mus musculus BAC clone RP24-356N5 from chromosome 13, complete sequence Length = 140207 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 92726 tcccctccccctcctcctcc 92745
>gb|AC127253.3| Mus musculus BAC clone RP24-281H12 from chromosome 3, complete sequence Length = 156318 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 22631 ttcccctccccctcctcctc 22612
>gb|AC127562.3| Mus musculus BAC clone RP24-279I22 from chromosome 15, complete sequence Length = 173351 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 89268 tcccctccccctcctcctcc 89287 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 89251 tcccctccccctcctcctcc 89270
>gb|AC124483.4| Mus musculus BAC clone RP24-127J3 from chromosome 5, complete sequence Length = 134272 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 96502 tcccctccccctcctcctcc 96521
>gb|AC123534.3| Mus musculus BAC clone RP23-356I5 from chromosome 14, complete sequence Length = 205222 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 139042 tcccctccccctcctcctcc 139061
>gb|AC125085.4| Mus musculus BAC clone RP24-135G18 from chromosome 8, complete sequence Length = 168721 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 57 cccctccccctcctcctccgcagtcttcttcc 88 ||||||||||||||||||| | ||||||||| Sbjct: 59077 cccctccccctcctcctcctccttcttcttcc 59108
>gb|AC122936.3| Mus musculus BAC clone RP23-20H6 from 5, complete sequence Length = 234064 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 195402 tcccctccccctcctcctcc 195421
>gb|AC122312.3| Mus musculus BAC clone RP23-298K16 from 19, complete sequence Length = 206657 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ccctattcccctccccctcc 69 |||||||||||||||||||| Sbjct: 35444 ccctattcccctccccctcc 35425
>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence Length = 238516 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 186736 ttcccctccccctcctcctc 186755
>gb|AC121599.3| Mus musculus BAC clone RP23-300H21 from 14, complete sequence Length = 218747 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 103520 ttcccctccccctcctcctc 103539
>gb|AC117211.3| Mus musculus BAC clone RP23-287M3 from 3, complete sequence Length = 206579 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 115456 tcccctccccctcctcctcc 115437
>gb|AC004892.2| Homo sapiens PAC clone RP4-802A9 from 7, complete sequence Length = 66273 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 9582 tcccctccccctcctcctcc 9563
>gb|AC117809.6| Mus musculus chromosome 19, clone RP24-571N5, complete sequence Length = 216153 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 163039 tcccctccccctcctcctcc 163020
>gb|AC116468.13| Mus musculus chromosome 16, clone RP23-166G21, complete sequence Length = 193206 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 148402 tcccctccccctcctcctcc 148383
>gb|AC164570.3| Mus musculus BAC clone CH25-194I22 from chromosome 5, complete sequence Length = 103796 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 87268 tcccctccccctcctcctcc 87249
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete sequence Length = 178703 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 153056 tcccctccccctcctcctcc 153037
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cccctattcccctccccctc 68 |||||||||||||||||||| Sbjct: 54287 cccctattcccctccccctc 54306
>gb|AC158615.6| Mus musculus 10 BAC RP23-256B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217393 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 261 agcagaatcttcccaacttcctcctatccttg 292 |||| ||||||||||| ||| ||||||||||| Sbjct: 18245 agcacaatcttcccaagttcatcctatccttg 18276
>emb|AL713866.4| Human DNA sequence from clone RP11-309H21 on chromosome 1 Contains a processed pseudogene similar to heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), complete sequence Length = 142390 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 68643 tcccctccccctcctcctcc 68624
>emb|AL512646.11| Human DNA sequence from clone RP11-217O12 on chromosome 9 Contains a novel pseudogene and a CpG island, complete sequence Length = 156476 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 3150 tcccctccccctcctcctcc 3169
>emb|AL392163.8| Human DNA sequence from clone RP11-43M11 on chromosome 9 Contains part of a novel gene (FLJ20375, KIAA1797), complete sequence Length = 161103 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 78047 ttcccctccccctcctcctc 78066
>emb|AL390839.33| Human DNA sequence from clone RP11-214L19 on chromosome 1 Contains a novel gene, complete sequence Length = 92253 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 49139 tcccctccccctcctcctcc 49120
>emb|AL360176.22| Human DNA sequence from clone RP11-124H7 on chromosome 10 Contains the 5' end of the MMP21 gene for matrix metalloproteinase 21, the UROS gene for uroporphyrinogen III synthase (congenital erythropoietic porphyria), the BCCIP gene for BRCA2 and CDKN1A interacting protein (TOK-1), the DDX32 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 (FLJ10694, FLJ10889), the 5' UTR of a novel gene (LOC92565) and three CpG islands, complete sequence Length = 155699 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ttgtctgggaggcgggcagg 110 |||||||||||||||||||| Sbjct: 148818 ttgtctgggaggcgggcagg 148799
>emb|AL355531.16| Human DNA sequence from clone RP11-300B2 on chromosome 10 Contains the 5' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase, complete sequence Length = 213887 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 144060 tcccctccccctcctcctcc 144079
>emb|AL161657.22| Human DNA sequence from clone RP11-46O3 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 92132 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 18648 tcccctccccctcctcctcc 18629
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 55695 tcccctccccctcctcctcc 55676
>gb|AC164010.2| Mus musculus chromosome 18, clone RP24-391C15, complete sequence Length = 162585 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 129229 ttcccctccccctcctcctc 129248
>gb|AC112026.4| Rattus norvegicus 19 BAC CH230-105L11 (Children's Hospital Oakland Research Institute) complete sequence Length = 237539 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 16549 ttcccctccccctcctcctc 16568
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 69186 tcccctccccctcctcctcc 69205
>ref|XM_784199.1| PREDICTED: Strongylocentrotus purpuratus similar to Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich splicing regulatory protein 86) (SRrp86) (SR-related protein of 86 kDa) (LOC584338), mRNA Length = 1545 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 1264 tcccctccccctcctcctcc 1283
>emb|BX070094.1|CNS09Q8Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7AA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 684 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gccaacatcaagcagttcca 258 |||||||||||||||||||| Sbjct: 432 gccaacatcaagcagttcca 451
>emb|BX066998.1|CNS09NUY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50CA07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 869 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gccaacatcaagcagttcca 258 |||||||||||||||||||| Sbjct: 447 gccaacatcaagcagttcca 466
>emb|BX063629.1|CNS09L9D Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC45CC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 552 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gccaacatcaagcagttcca 258 |||||||||||||||||||| Sbjct: 442 gccaacatcaagcagttcca 461
>emb|BX034964.1|CNS08Z54 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6AD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 712 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gccaacatcaagcagttcca 258 |||||||||||||||||||| Sbjct: 430 gccaacatcaagcagttcca 449
>gb|AC157553.10| Mus musculus chromosome 7, clone RP24-68L4, complete sequence Length = 184205 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 77415 tcccctccccctcctcctcc 77396
>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence Length = 220032 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 34840 tcccctccccctcctcctcc 34859
>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 3/11 Length = 340493 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 129841 tcccctccccctcctcctcc 129822
>emb|BX842628.1| Neurospora crassa DNA linkage group I BAC clone B23L4 Length = 61971 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 25168 ttcccctccccctcctcctc 25149
>gb|AC109142.7| Mus musculus chromosome 8, clone RP23-168D5, complete sequence Length = 207544 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 62745 tcccctccccctcctcctcc 62764
>gb|AC162381.7| Mus musculus 10 BAC RP24-528B14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150712 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 121198 tcccctccccctcctcctcc 121217
>emb|AL645603.12| Mouse DNA sequence from clone RP23-299L18 on chromosome 11 Contains the 5' end of the Nf2 gene for neurofibromatosis 2, the 5' end of the Nipsnap1 gene for 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans) and a CpG island, complete sequence Length = 73503 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 8100 tcccctccccctcctcctcc 8081
>emb|AL596086.9| Mouse DNA sequence from clone RP23-168C20 on chromosome 11 Contains the 3' end of the Tex14 gene for testis expressed gene 14, complete sequence Length = 200501 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 61293 tcccctccccctcctcctcc 61312
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 96125 tcccctccccctcctcctcc 96144
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 64618 tcccctccccctcctcctcc 64599
>emb|AL662802.14| Mouse DNA sequence from clone RP23-34N10 on chromosome 11, complete sequence Length = 224024 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ccctattcccctccccctcctcct 73 |||| ||||||||||||||||||| Sbjct: 173194 ccctcttcccctccccctcctcct 173217
>emb|AL662841.10| Mouse DNA sequence from clone RP23-31O3 on chromosome 11 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 109589 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ttcccctccccctcctcctc 74 |||||||||||||||||||| Sbjct: 16251 ttcccctccccctcctcctc 16270
>emb|AL646043.7| Mouse DNA sequence from clone RP23-5M21 on chromosome 11 Contains a glutamate-ammonia ligase (glutamine synthase) (Glul) pseudogene, a ribosomal protein L29 (Rpl29) pseudogene and a ribosomal protein S2 (Rps2) pseudogene, complete sequence Length = 128100 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tcccctccccctcctcctcc 75 |||||||||||||||||||| Sbjct: 61262 tcccctccccctcctcctcc 61243 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,863,558 Number of Sequences: 3902068 Number of extensions: 4863558 Number of successful extensions: 147732 Number of sequences better than 10.0: 386 Number of HSP's better than 10.0 without gapping: 399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 143889 Number of HSP's gapped (non-prelim): 3843 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
