ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUAAB_SULSO (Q97TZ8) GMP synthase [glutamine-hydrolyzing] subuni... 31 1.6
2BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc... 30 2.8
3ETK_ECO27 (P58764) Tyrosine-protein kinase etk (EC 2.7.10.2) 30 3.6
4I20RB_HUMAN (Q6UXL0) Interleukin-20 receptor beta chain precurso... 30 3.6
5MOK_MOUSE (Q9WVS4) MAPK/MAK/MRK overlapping kinase (EC 2.7.11.22... 29 4.7
6TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2) 29 6.2
7YLON_BACSU (O34617) Hypothetical UPF0063 protein yloN 29 6.2
8BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc... 29 6.2
9TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined co... 23 7.4
10YCF1_ADICA (Q85FG7) Hypothetical 199.0 kDa protein ycf1 28 8.1

>GUAAB_SULSO (Q97TZ8) GMP synthase [glutamine-hydrolyzing] subunit B (EC|
           6.3.5.2) (GMP synthetase)
          Length = 367

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = +1

Query: 202 MPSKKGDKATEAVPVLPFEALPAADYIRLPREQMNAFNSQIIQSL 336
           +  +   K + A+  +  E    ADY+R+P+E ++  +S+I+Q +
Sbjct: 302 LDERNSGKYSVAIRAVTTEDFMTADYVRIPKEILSKISSEILQKI 346



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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2160

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +1

Query: 79  PPSFC-----MRKARPKITSGAATGSEPSNIFEAFWHPTDLAVKPVMPSKKGDKATEAVP 243
           PP+ C     +  A   ++ G +T S  S  FEA        V+P +PSK+G +  E VP
Sbjct: 553 PPAQCTPTPGVAAAPTLVSGGGSTSSTSSGSFEAS------PVEPQLPSKEGPEPPEEVP 606



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>ETK_ECO27 (P58764) Tyrosine-protein kinase etk (EC 2.7.10.2)|
          Length = 726

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 21/75 (28%), Positives = 36/75 (48%)
 Frame = +1

Query: 202 MPSKKGDKATEAVPVLPFEALPAADYIRLPREQMNAFNSQIIQSLNGSFQVSEKQNIIRY 381
           M  ++ +K   A+ +   +A P   ++   R ++ A N+     L G+F VSE+      
Sbjct: 175 MVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINA-----LQGTFTVSERSKESGM 229

Query: 382 LELLSMNSDAANVIT 426
           LE L+M  D   +IT
Sbjct: 230 LE-LTMTGDDPQLIT 243



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>I20RB_HUMAN (Q6UXL0) Interleukin-20 receptor beta chain precursor (IL-20R-beta)|
           (IL-20R2)
          Length = 311

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 14/99 (14%)
 Frame = -1

Query: 336 QTLNYLAIECIHLFSW*PDVISSRKSFKRKYRDSLGSFISLFTGHNWFN---CKICWMPE 166
           Q L+ L+    HL  W P +      +     +  G + SL+T H W     C +   PE
Sbjct: 39  QNLSVLSTNMKHLLMWSPVIAPGETVYYSV--EYQGEYESLYTSHIWIPSSWCSLTEGPE 96

Query: 165 CFKDVR-----------RLRTRCGTRCYLWTCFPHTETR 82
           C  DV            R+R   G++   W+   H   R
Sbjct: 97  C--DVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNR 133



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>MOK_MOUSE (Q9WVS4) MAPK/MAK/MRK overlapping kinase (EC 2.7.11.22) (MOK|
           protein kinase)
          Length = 420

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = -2

Query: 194 LTARSVGCQNASKMLDGSEPVAAPDVIFGRAFLIQKLGGVATTSRFSEQFCPAFNMVSGL 15
           L+ + +   +A    D  E +AA   +    F +Q+     T ++    FCP F+MV   
Sbjct: 254 LSPQCLSLLHAMVAYDPDERIAAHQALQHPYFQVQRAAETQTLAKHRRAFCPKFSMVPES 313

Query: 14  IEHS 3
             H+
Sbjct: 314 SSHN 317



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>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)|
          Length = 743

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
 Frame = +1

Query: 25  TMLKAGQNCSENLDVVATPPSFCMRKARPKITSGAATGSEPSNIFEAFWHPTDLAVKPVM 204
           T    G + + N D+ + P S+      P+++S    G  P   FE+  H    +V   +
Sbjct: 351 TSFSLGSHSTLNGDL-SVPSSYVSLHLSPQVSSSVVYGRSPVMAFESHPHLRGSSVSSSL 409

Query: 205 PSKKGDKATEAVPV----------LPFEALPAADYIRLPREQMNAFNSQII--QSLNGSF 348
           PS  G K   +  V           P +AL  A   R  R+     + +++   +++GS 
Sbjct: 410 PSIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGST 469

Query: 349 Q 351
           Q
Sbjct: 470 Q 470



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>YLON_BACSU (O34617) Hypothetical UPF0063 protein yloN|
          Length = 363

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 238 VPVLPFEALPAADYIRLPREQMNAFNSQI 324
           V ++P   +P  DY+R PR+Q+ AF   +
Sbjct: 301 VNLIPVNYVPERDYVRTPRDQIFAFEKTL 329



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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2157

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 115 ITSGAATGSEPSNIFEAFWHPTDLAVKPVMPSKKGDKATEAVP 243
           ++ G +T S  S  FEA        V+P +PSK+G +  E VP
Sbjct: 570 VSGGGSTSSTSSGSFEAS------PVEPQLPSKEGPEPPEEVP 606



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>TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3 homolog)
          Length = 1084

 Score = 23.5 bits (49), Expect(2) = 7.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 246 YRDSLGSFISLFTGHNWFNCKIC 178
           YR +   + S+FTG + F CK C
Sbjct: 229 YRQNNKLYGSVFTGASKFRCKDC 251



 Score = 23.5 bits (49), Expect(2) = 7.4
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -3

Query: 403 SSCLT-TPGI**YSVSLKPEKTHSNSELSGY*MHSSVLVVT 284
           ++C T T  I   S S     T SNS  SGY  H + L  T
Sbjct: 167 TACTTATTAITSCSTSTSHSSTTSNSSSSGYDWHQAALAKT 207



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>YCF1_ADICA (Q85FG7) Hypothetical 199.0 kDa protein ycf1|
          Length = 1691

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = -1

Query: 387 LQVSDDILFL*NLKRPIQTLNYLAIECIHLFSW*PDVISSRKSFKRKYRDSLGS 226
           L   D ILFL           YL + C H F W    IS  K+F RK   SL +
Sbjct: 511 LDYEDHILFL----------TYLEVGCCHRFGW----ISPLKAFLRKSSKSLSN 550


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,285,109
Number of Sequences: 219361
Number of extensions: 1186371
Number of successful extensions: 3168
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3167
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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