Clone Name | bastl39c10 |
---|---|
Clone Library Name | barley_pub |
>GUAAB_SULSO (Q97TZ8) GMP synthase [glutamine-hydrolyzing] subunit B (EC| 6.3.5.2) (GMP synthetase) Length = 367 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/45 (26%), Positives = 26/45 (57%) Frame = +1 Query: 202 MPSKKGDKATEAVPVLPFEALPAADYIRLPREQMNAFNSQIIQSL 336 + + K + A+ + E ADY+R+P+E ++ +S+I+Q + Sbjct: 302 LDERNSGKYSVAIRAVTTEDFMTADYVRIPKEILSKISSEILQKI 346
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2160 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +1 Query: 79 PPSFC-----MRKARPKITSGAATGSEPSNIFEAFWHPTDLAVKPVMPSKKGDKATEAVP 243 PP+ C + A ++ G +T S S FEA V+P +PSK+G + E VP Sbjct: 553 PPAQCTPTPGVAAAPTLVSGGGSTSSTSSGSFEAS------PVEPQLPSKEGPEPPEEVP 606
>ETK_ECO27 (P58764) Tyrosine-protein kinase etk (EC 2.7.10.2)| Length = 726 Score = 29.6 bits (65), Expect = 3.6 Identities = 21/75 (28%), Positives = 36/75 (48%) Frame = +1 Query: 202 MPSKKGDKATEAVPVLPFEALPAADYIRLPREQMNAFNSQIIQSLNGSFQVSEKQNIIRY 381 M ++ +K A+ + +A P ++ R ++ A N+ L G+F VSE+ Sbjct: 175 MVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINA-----LQGTFTVSERSKESGM 229 Query: 382 LELLSMNSDAANVIT 426 LE L+M D +IT Sbjct: 230 LE-LTMTGDDPQLIT 243
>I20RB_HUMAN (Q6UXL0) Interleukin-20 receptor beta chain precursor (IL-20R-beta)| (IL-20R2) Length = 311 Score = 29.6 bits (65), Expect = 3.6 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 14/99 (14%) Frame = -1 Query: 336 QTLNYLAIECIHLFSW*PDVISSRKSFKRKYRDSLGSFISLFTGHNWFN---CKICWMPE 166 Q L+ L+ HL W P + + + G + SL+T H W C + PE Sbjct: 39 QNLSVLSTNMKHLLMWSPVIAPGETVYYSV--EYQGEYESLYTSHIWIPSSWCSLTEGPE 96 Query: 165 CFKDVR-----------RLRTRCGTRCYLWTCFPHTETR 82 C DV R+R G++ W+ H R Sbjct: 97 C--DVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNR 133
>MOK_MOUSE (Q9WVS4) MAPK/MAK/MRK overlapping kinase (EC 2.7.11.22) (MOK| protein kinase) Length = 420 Score = 29.3 bits (64), Expect = 4.7 Identities = 16/64 (25%), Positives = 28/64 (43%) Frame = -2 Query: 194 LTARSVGCQNASKMLDGSEPVAAPDVIFGRAFLIQKLGGVATTSRFSEQFCPAFNMVSGL 15 L+ + + +A D E +AA + F +Q+ T ++ FCP F+MV Sbjct: 254 LSPQCLSLLHAMVAYDPDERIAAHQALQHPYFQVQRAAETQTLAKHRRAFCPKFSMVPES 313 Query: 14 IEHS 3 H+ Sbjct: 314 SSHN 317
>TLE2_HUMAN (Q04725) Transducin-like enhancer protein 2 (ESG2)| Length = 743 Score = 28.9 bits (63), Expect = 6.2 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 12/121 (9%) Frame = +1 Query: 25 TMLKAGQNCSENLDVVATPPSFCMRKARPKITSGAATGSEPSNIFEAFWHPTDLAVKPVM 204 T G + + N D+ + P S+ P+++S G P FE+ H +V + Sbjct: 351 TSFSLGSHSTLNGDL-SVPSSYVSLHLSPQVSSSVVYGRSPVMAFESHPHLRGSSVSSSL 409 Query: 205 PSKKGDKATEAVPV----------LPFEALPAADYIRLPREQMNAFNSQII--QSLNGSF 348 PS G K + V P +AL A R R+ + +++ +++GS Sbjct: 410 PSIPGGKPAYSFHVSADGQMQPVPFPSDALVGAGIPRHARQLHTLAHGEVVCAVTISGST 469 Query: 349 Q 351 Q Sbjct: 470 Q 470
>YLON_BACSU (O34617) Hypothetical UPF0063 protein yloN| Length = 363 Score = 28.9 bits (63), Expect = 6.2 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 238 VPVLPFEALPAADYIRLPREQMNAFNSQI 324 V ++P +P DY+R PR+Q+ AF + Sbjct: 301 VNLIPVNYVPERDYVRTPRDQIFAFEKTL 329
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2157 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 115 ITSGAATGSEPSNIFEAFWHPTDLAVKPVMPSKKGDKATEAVP 243 ++ G +T S S FEA V+P +PSK+G + E VP Sbjct: 570 VSGGGSTSSTSSGSFEAS------PVEPQLPSKEGPEPPEEVP 606
>TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined colon cancer| antigen 3 homolog) Length = 1084 Score = 23.5 bits (49), Expect(2) = 7.4 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 246 YRDSLGSFISLFTGHNWFNCKIC 178 YR + + S+FTG + F CK C Sbjct: 229 YRQNNKLYGSVFTGASKFRCKDC 251 Score = 23.5 bits (49), Expect(2) = 7.4 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = -3 Query: 403 SSCLT-TPGI**YSVSLKPEKTHSNSELSGY*MHSSVLVVT 284 ++C T T I S S T SNS SGY H + L T Sbjct: 167 TACTTATTAITSCSTSTSHSSTTSNSSSSGYDWHQAALAKT 207
>YCF1_ADICA (Q85FG7) Hypothetical 199.0 kDa protein ycf1| Length = 1691 Score = 28.5 bits (62), Expect = 8.1 Identities = 20/54 (37%), Positives = 23/54 (42%) Frame = -1 Query: 387 LQVSDDILFL*NLKRPIQTLNYLAIECIHLFSW*PDVISSRKSFKRKYRDSLGS 226 L D ILFL YL + C H F W IS K+F RK SL + Sbjct: 511 LDYEDHILFL----------TYLEVGCCHRFGW----ISPLKAFLRKSSKSLSN 550 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.131 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,285,109 Number of Sequences: 219361 Number of extensions: 1186371 Number of successful extensions: 3168 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3093 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3167 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)