ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl39c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHR_THET2 (P61496) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.... 31 1.4
2PHR_THET8 (P61497) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.... 30 4.1
3MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.4... 29 5.4
4DRD4_RAT (P30729) D(4) dopamine receptor (Dopamine D4 receptor) ... 29 7.1
5WFDC1_HUMAN (Q9HC57) WAP four-disulfide core domain protein 1 pr... 29 7.1
6EOMES_HUMAN (O95936) Eomesodermin homolog 29 7.1
7WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7... 28 9.2

>PHR_THET2 (P61496) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 420

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 27/87 (31%), Positives = 34/87 (39%)
 Frame = +1

Query: 7   SLNSKTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLTAHSPXXXXXXXXXXXXXXXP 186
           +L S T   R   AK++ EA PV     P     PP    A+                 P
Sbjct: 93  ALTSYTPYGRYRDAKVQ-EALPVPLHLLPAPHLLPPDLPRAYRVYTPFARRFLGVEAPLP 151

Query: 187 CSPSTLLPGMENGEIEAAEDGLPVPAP 267
            +P  L  G E GEI   + GLP+P P
Sbjct: 152 -APEALPKGPEEGEIPREDPGLPLPEP 177



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>PHR_THET8 (P61497) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA|
           photolyase) (Photoreactivating enzyme)
          Length = 420

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 26/87 (29%), Positives = 32/87 (36%)
 Frame = +1

Query: 7   SLNSKTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLTAHSPXXXXXXXXXXXXXXXP 186
           +L S T   R    ++R EA PV     P     PP    A+                 P
Sbjct: 93  ALTSHTPYGRYRDGRVR-EALPVPLHLLPAPHLLPPDLPRAYRVYTPFSRLYRGAAPPLP 151

Query: 187 CSPSTLLPGMENGEIEAAEDGLPVPAP 267
             P  L  G E GEI   + GLP+P P
Sbjct: 152 -PPEALPKGPEEGEIPREDPGLPLPEP 177



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>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)|
           (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
           4) (Histone acetyltransferase MOZ2) (Monocytic leukemia
           zinc finger protein-related factor) (Histone
           acetyltransferas
          Length = 2073

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
 Frame = +1

Query: 91  PPSDRCPPSPLTAHSPXXXXXXXXXXX----XXXXPCSPSTLLPGMENGEIEAAEDGL 252
           PPS   PP+P++  SP                    CS  +L     N +++A  DGL
Sbjct: 490 PPSSLPPPTPISGQSPSSQKSSTATSSPSPQSSSSQCSVPSLSSLTTNSQLKALFDGL 547



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>DRD4_RAT (P30729) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)|
           dopamine receptor)
          Length = 387

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
 Frame = +1

Query: 70  PVS*LFQPP--SDRCPPSPLTAHSPXXXXXXXXXXXXXXXPCSPSTLLPGMENGEIEAAE 243
           PVS   Q P  SD  PPSP    SP               PCSP  LLP          +
Sbjct: 239 PVSDPTQGPLFSDCPPPSPSLRTSPTVSSRPESDLSQS--PCSPGCLLP----------D 286

Query: 244 DGLPVPAPPNGRRYR 288
             L  P  P+ RR R
Sbjct: 287 AALAQPPAPSSRRKR 301



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>WFDC1_HUMAN (Q9HC57) WAP four-disulfide core domain protein 1 precursor|
           (Prostate stromal protein ps20) (ps20 growth inhibitor)
          Length = 220

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 19  KTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLT 126
           + L AR+      +EA       QP +DRCPP P T
Sbjct: 37  RALPARLAEKSRAEEAGAPGGPRQPRADRCPPPPRT 72



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>EOMES_HUMAN (O95936) Eomesodermin homolog|
          Length = 686

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 190 SPSTLLPGMENGEIEAAEDGLPVPAPPNGRRYRPVGSDD 306
           +P+ +L   + G+  A+   +  P PP+GR+  P G ++
Sbjct: 75  APAAMLSDTDAGDAFASAAAVAKPGPPDGRKGSPCGEEE 113



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>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein|
            kinase with no lysine 1) (Protein kinase,
            lysine-deficient 1) (Kinase deficient protein)
          Length = 2382

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 7/71 (9%)
 Frame = +1

Query: 250  LPVPAPPNGRRYRPVGSDDSAVIQMTS-------MEXXXXXXXXXXXXHDAITPQPPRNL 408
            +P  AP +GRR RP  S  S   + +S       +             H   T  PP N+
Sbjct: 2114 IPPAAPLSGRRRRPTKSKGSKSSRSSSLGNKSPQLSGNLSGQSAASVLHPQQTLHPPGNI 2173

Query: 409  KPGGANLTIDP 441
               G N  + P
Sbjct: 2174 PESGQNQLLQP 2184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,564,062
Number of Sequences: 219361
Number of extensions: 987370
Number of successful extensions: 2997
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2991
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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