Clone Name | bastl39c04 |
---|---|
Clone Library Name | barley_pub |
>PHR_THET2 (P61496) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 420 Score = 31.2 bits (69), Expect = 1.4 Identities = 27/87 (31%), Positives = 34/87 (39%) Frame = +1 Query: 7 SLNSKTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLTAHSPXXXXXXXXXXXXXXXP 186 +L S T R AK++ EA PV P PP A+ P Sbjct: 93 ALTSYTPYGRYRDAKVQ-EALPVPLHLLPAPHLLPPDLPRAYRVYTPFARRFLGVEAPLP 151 Query: 187 CSPSTLLPGMENGEIEAAEDGLPVPAP 267 +P L G E GEI + GLP+P P Sbjct: 152 -APEALPKGPEEGEIPREDPGLPLPEP 177
>PHR_THET8 (P61497) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 420 Score = 29.6 bits (65), Expect = 4.1 Identities = 26/87 (29%), Positives = 32/87 (36%) Frame = +1 Query: 7 SLNSKTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLTAHSPXXXXXXXXXXXXXXXP 186 +L S T R ++R EA PV P PP A+ P Sbjct: 93 ALTSHTPYGRYRDGRVR-EALPVPLHLLPAPHLLPPDLPRAYRVYTPFSRLYRGAAPPLP 151 Query: 187 CSPSTLLPGMENGEIEAAEDGLPVPAP 267 P L G E GEI + GLP+P P Sbjct: 152 -PPEALPKGPEEGEIPREDPGLPLPEP 177
>MYST4_HUMAN (Q8WYB5) Histone acetyltransferase MYST4 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 4) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 4) (Histone acetyltransferase MOZ2) (Monocytic leukemia zinc finger protein-related factor) (Histone acetyltransferas Length = 2073 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%) Frame = +1 Query: 91 PPSDRCPPSPLTAHSPXXXXXXXXXXX----XXXXPCSPSTLLPGMENGEIEAAEDGL 252 PPS PP+P++ SP CS +L N +++A DGL Sbjct: 490 PPSSLPPPTPISGQSPSSQKSSTATSSPSPQSSSSQCSVPSLSSLTTNSQLKALFDGL 547
>DRD4_RAT (P30729) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 387 Score = 28.9 bits (63), Expect = 7.1 Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 2/75 (2%) Frame = +1 Query: 70 PVS*LFQPP--SDRCPPSPLTAHSPXXXXXXXXXXXXXXXPCSPSTLLPGMENGEIEAAE 243 PVS Q P SD PPSP SP PCSP LLP + Sbjct: 239 PVSDPTQGPLFSDCPPPSPSLRTSPTVSSRPESDLSQS--PCSPGCLLP----------D 286 Query: 244 DGLPVPAPPNGRRYR 288 L P P+ RR R Sbjct: 287 AALAQPPAPSSRRKR 301
>WFDC1_HUMAN (Q9HC57) WAP four-disulfide core domain protein 1 precursor| (Prostate stromal protein ps20) (ps20 growth inhibitor) Length = 220 Score = 28.9 bits (63), Expect = 7.1 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 19 KTLQARVPSAKMRDEANPVS*LFQPPSDRCPPSPLT 126 + L AR+ +EA QP +DRCPP P T Sbjct: 37 RALPARLAEKSRAEEAGAPGGPRQPRADRCPPPPRT 72
>EOMES_HUMAN (O95936) Eomesodermin homolog| Length = 686 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/39 (28%), Positives = 22/39 (56%) Frame = +1 Query: 190 SPSTLLPGMENGEIEAAEDGLPVPAPPNGRRYRPVGSDD 306 +P+ +L + G+ A+ + P PP+GR+ P G ++ Sbjct: 75 APAAMLSDTDAGDAFASAAAVAKPGPPDGRKGSPCGEEE 113
>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Protein| kinase with no lysine 1) (Protein kinase, lysine-deficient 1) (Kinase deficient protein) Length = 2382 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 7/71 (9%) Frame = +1 Query: 250 LPVPAPPNGRRYRPVGSDDSAVIQMTS-------MEXXXXXXXXXXXXHDAITPQPPRNL 408 +P AP +GRR RP S S + +S + H T PP N+ Sbjct: 2114 IPPAAPLSGRRRRPTKSKGSKSSRSSSLGNKSPQLSGNLSGQSAASVLHPQQTLHPPGNI 2173 Query: 409 KPGGANLTIDP 441 G N + P Sbjct: 2174 PESGQNQLLQP 2184 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,564,062 Number of Sequences: 219361 Number of extensions: 987370 Number of successful extensions: 2997 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2991 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)