ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl39c01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104340.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G02, full insert sequence Length = 2950 Score = 426 bits (215), Expect = e-116 Identities = 296/323 (91%) Strand = Plus / Plus Query: 140 ccccgatccgacggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatct 199 ||||||| || |||| ||| |||| |||||| |||| |||||||||||||| ||||||| Sbjct: 114 ccccgattcggcggcggcgccggccgcgatggcgacccacgagcggaagacgatcgatct 173 Query: 200 ggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcctcgaggg 259 |||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 174 ggagcaggggtgggagttcatgcagaagggcatcaccaagctgaagaacatcctcgaggg 233 Query: 260 caagccggagccgcagttcagctccgaggactacatgatgctctacacgacgatatacaa 319 ||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 234 gaagcccgaaccccagttcagctccgaggactacatgatgctctacacgacgatttacaa 293 Query: 320 catgtgcacgcagaagcccccgcacgactactcgcagcagctctacgacaagtaccgcga 379 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 294 catgtgcacgcagaagccgccgcacgactactcgcagcagctctacgagaagtaccgcga 353 Query: 380 gtccttcgaggagtacatctcctccatggtcttaccttcattaagagagaagcatgacga 439 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| || Sbjct: 354 gtccttcgaggagtacatcacgtccatggtcttaccttcattaagagagaaacatgatga 413 Query: 440 gtttatgttgagggagctagtaa 462 ||||||| |||| |||||||||| Sbjct: 414 gtttatgctgagagagctagtaa 436
>dbj|AK064940.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P07, full insert sequence Length = 3029 Score = 426 bits (215), Expect = e-116 Identities = 296/323 (91%) Strand = Plus / Plus Query: 140 ccccgatccgacggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatct 199 ||||||| || |||| ||| |||| |||||| |||| |||||||||||||| ||||||| Sbjct: 166 ccccgattcggcggcggcgccggccgcgatggcgacccacgagcggaagacgatcgatct 225 Query: 200 ggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcctcgaggg 259 |||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 226 ggagcaggggtgggagttcatgcagaagggcatcaccaagctgaagaacatcctcgaggg 285 Query: 260 caagccggagccgcagttcagctccgaggactacatgatgctctacacgacgatatacaa 319 ||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 286 gaagcccgaaccccagttcagctccgaggactacatgatgctctacacgacgatttacaa 345 Query: 320 catgtgcacgcagaagcccccgcacgactactcgcagcagctctacgacaagtaccgcga 379 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 346 catgtgcacgcagaagccgccgcacgactactcgcagcagctctacgagaagtaccgcga 405 Query: 380 gtccttcgaggagtacatctcctccatggtcttaccttcattaagagagaagcatgacga 439 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| || Sbjct: 406 gtccttcgaggagtacatcacgtccatggtcttaccttcattaagagagaaacatgatga 465 Query: 440 gtttatgttgagggagctagtaa 462 ||||||| |||| |||||||||| Sbjct: 466 gtttatgctgagagagctagtaa 488
>gb|AY336990.1| Oryza sativa (japonica cultivar-group) CUL1 mRNA, complete cds Length = 2478 Score = 416 bits (210), Expect = e-113 Identities = 276/298 (92%) Strand = Plus / Plus Query: 165 gcgatgacgacgcacgagcggaagaccgtcgatctggaggagggctgggccttcatgcag 224 |||||| |||| |||||||||||||| ||||||||||| |||| |||| ||||||||| Sbjct: 118 gcgatggcgacccacgagcggaagacgatcgatctggagcaggggtgggagttcatgcag 177 Query: 225 aagggcatcaccaagctcaagaacatcctcgagggcaagccggagccgcagttcagctcc 284 ||||||||||||||||| ||||||||||||||||| ||||| || || |||||||||||| Sbjct: 178 aagggcatcaccaagctgaagaacatcctcgaggggaagcccgaaccccagttcagctcc 237 Query: 285 gaggactacatgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcac 344 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 238 gaggactacatgatgctctacacgacgatttacaacatgtgcacgcagaagccgccgcac 297 Query: 345 gactactcgcagcagctctacgacaagtaccgcgagtccttcgaggagtacatctcctcc 404 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 298 gactactcgcagcagctctacgagaagtaccgcgagtccttcgaggagtacatcacgtcc 357 Query: 405 atggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 |||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| Sbjct: 358 atggtcttaccttcattaagagagaaacatgatgagtttatgctgagagagctagtaa 415
>ref|NM_193822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2199 Score = 410 bits (207), Expect = e-111 Identities = 270/291 (92%) Strand = Plus / Plus Query: 172 cgacgcacgagcggaagaccgtcgatctggaggagggctgggccttcatgcagaagggca 231 |||| |||||||||||||| ||||||||||| |||| |||| |||||||||||||||| Sbjct: 5 cgacccacgagcggaagacgatcgatctggagcaggggtgggagttcatgcagaagggca 64 Query: 232 tcaccaagctcaagaacatcctcgagggcaagccggagccgcagttcagctccgaggact 291 |||||||||| ||||||||||||||||| ||||| || || ||||||||||||||||||| Sbjct: 65 tcaccaagctgaagaacatcctcgaggggaagcccgaaccccagttcagctccgaggact 124 Query: 292 acatgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactact 351 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 125 acatgatgctctacacgacgatttacaacatgtgcacgcagaagccgccgcacgactact 184 Query: 352 cgcagcagctctacgacaagtaccgcgagtccttcgaggagtacatctcctccatggtct 411 |||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| Sbjct: 185 cgcagcagctctacgagaagtaccgcgagtccttcgaggagtacatcacgtccatggtct 244 Query: 412 taccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 ||||||||||||||||||| ||||| ||||||||| |||| |||||||||| Sbjct: 245 taccttcattaagagagaaacatgatgagtttatgctgagagagctagtaa 295
>gb|BT009380.1| Triticum aestivum clone wlm96.pk031.g23:fis, full insert mRNA sequence Length = 693 Score = 278 bits (140), Expect = 2e-71 Identities = 176/188 (93%) Strand = Plus / Plus Query: 259 gcaagccggagccgcagttcagctccgaggactacatgatgctctacacgacgatataca 318 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcaagcccgagccgcagttcagctccgaggactacatgatgctctacacgacgatataca 60 Query: 319 acatgtgcacgcagaagcccccgcacgactactcgcagcagctctacgacaagtaccgcg 378 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 61 acatgtgcacgcagaagcccccgcacgactactcgcagcagctctatgacaagtaccgcg 120 Query: 379 agtccttcgaggagtacatctcctccatggtcttaccttcattaagagagaagcatgacg 438 || ||||||||||||||||| ||| |||||| || ||||||| |||||||||||| | Sbjct: 121 aggccttcgaggagtacatccgggccacggtcttgccatcattaaaagagaagcatgatg 180 Query: 439 agtttatg 446 |||||||| Sbjct: 181 agtttatg 188
>dbj|AK073947.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073A13, full insert sequence Length = 2869 Score = 244 bits (123), Expect = 2e-61 Identities = 147/155 (94%) Strand = Plus / Plus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 367 gacgatatacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 426 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggtcttaccttcattaagaga 427 ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 427 caagtaccgggagtcattcgaggagtacatcacctccatggtcttaccttcattaagaga 486 Query: 428 gaagcatgacgagtttatgttgagggagctagtaa 462 || ||||||||||||||| ||||||| ||||||| Sbjct: 487 taaacatgacgagtttatgctgagggaactagtaa 521 Score = 194 bits (98), Expect = 2e-46 Identities = 144/158 (91%), Gaps = 1/158 (0%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatctggaggagggct 210 |||| ||||| ||||||||| || ||| ||||||| ||| |||||||||||||||| | Sbjct: 176 cggcggcggctgcggcgatggcggggcaggagcggaggacgatcgatctggaggaggg-t 234 Query: 211 gggccttcatgcagaagggcatcaccaagctcaagaacatcctcgagggcaagccggagc 270 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 235 gggcgttcatgcagaagggcatcaccaagctgaagaacatcctcgagggcaagcccgagc 294 Query: 271 cgcagttcagctccgaggactacatgatgctctacacg 308 | |||||||||||||||||||||||||||||||||||| Sbjct: 295 cacagttcagctccgaggactacatgatgctctacacg 332
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 210 bits (106), Expect = 3e-51 Identities = 145/158 (91%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatctggaggagggct 210 |||| ||||| ||||||||| || ||| ||||||| ||| |||||||||||||||| | Sbjct: 87296 cggcggcggctgcggcgatggcggggcaggagcggaggacgatcgatctggaggagggat 87355 Query: 211 gggccttcatgcagaagggcatcaccaagctcaagaacatcctcgagggcaagccggagc 270 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 87356 gggcgttcatgcagaagggcatcaccaagctgaagaacatcctcgagggcaagcccgagc 87415 Query: 271 cgcagttcagctccgaggactacatgatgctctacacg 308 |||||||||||||||||||||||||||||||||||||| Sbjct: 87416 cgcagttcagctccgaggactacatgatgctctacacg 87453 Score = 170 bits (86), Expect = 3e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 87595 gacgatatacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 87654 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 ||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 87655 caagtaccgggagtcattcgaggagtacatcacctccatggt 87696 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 ||||||||||||||||||||| || || |||||||||||| ||||||| ||||||| Sbjct: 89126 ggtcttaccttcattaagagataaacacgacgagtttatgctgagggaactagtaa 89181
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 202 bits (102), Expect = 7e-49 Identities = 144/158 (91%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatctggaggagggct 210 |||| ||||| ||||||||| || ||| ||||||| ||| |||||||||||||||| | Sbjct: 58603 cggcggcggctgcggcgatggcggggcaggagcggaggacgatcgatctggaggagggat 58544 Query: 211 gggccttcatgcagaagggcatcaccaagctcaagaacatcctcgagggcaagccggagc 270 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 58543 gggcgttcatgcagaagggcatcaccaagctgaagaacatcctcgagggcaagcccgagc 58484 Query: 271 cgcagttcagctccgaggactacatgatgctctacacg 308 | |||||||||||||||||||||||||||||||||||| Sbjct: 58483 cacagttcagctccgaggactacatgatgctctacacg 58446 Score = 170 bits (86), Expect = 3e-39 Identities = 98/102 (96%) Strand = Plus / Minus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 58304 gacgatatacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 58245 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 ||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 58244 caagtaccgggagtcattcgaggagtacatcacctccatggt 58203 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 ||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 56774 ggtcttaccttcattaagagataaacatgacgagtttatgctgagggaactagtaa 56719
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 202 bits (102), Expect = 7e-49 Identities = 144/158 (91%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatctggaggagggct 210 |||| ||||| ||||||||| || ||| ||||||| ||| |||||||||||||||| | Sbjct: 2780277 cggcggcggctgcggcgatggcggggcaggagcggaggacgatcgatctggaggagggat 2780218 Query: 211 gggccttcatgcagaagggcatcaccaagctcaagaacatcctcgagggcaagccggagc 270 |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 2780217 gggcgttcatgcagaagggcatcaccaagctgaagaacatcctcgagggcaagcccgagc 2780158 Query: 271 cgcagttcagctccgaggactacatgatgctctacacg 308 | |||||||||||||||||||||||||||||||||||| Sbjct: 2780157 cacagttcagctccgaggactacatgatgctctacacg 2780120 Score = 170 bits (86), Expect = 3e-39 Identities = 98/102 (96%) Strand = Plus / Minus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2779978 gacgatatacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 2779919 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 ||||||||| ||||| ||||||||||||||| |||||||||| Sbjct: 2779918 caagtaccgggagtcattcgaggagtacatcacctccatggt 2779877 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 ||||||||||||||||||||| || ||||||||||||||| ||||||| ||||||| Sbjct: 2778448 ggtcttaccttcattaagagataaacatgacgagtttatgctgagggaactagtaa 2778393 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacgc 177 |||||| |||||||||||||||||||||| Sbjct: 15518100 gacggcggcggcggcggcgatgacgacgc 15518128 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 6638033 gcggcggcggcgatgacgacg 6638013 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cggcggcggcgatgacgacg 176 |||||||||||||||||||| Sbjct: 7208502 cggcggcggcgatgacgacg 7208521
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 192 bits (97), Expect = 7e-46 Identities = 151/169 (89%) Strand = Plus / Minus Query: 140 ccccgatccgacggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatct 199 ||||||| || |||| ||| |||| |||||| |||| |||||||||||||| ||||||| Sbjct: 137326 ccccgattcggcggcggcgccggccgcgatggcgacccacgagcggaagacgatcgatct 137267 Query: 200 ggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcctcgaggg 259 |||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 137266 ggagcaggggtgggagttcatgcagaagggcatcaccaagctgaagaacatcctcgaggg 137207 Query: 260 caagccggagccgcagttcagctccgaggactacatgatgctctacacg 308 ||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 137206 gaagcccgaaccccagttcagctccgaggactacatgatgctctacacg 137158 Score = 163 bits (82), Expect = 6e-37 Identities = 97/102 (95%) Strand = Plus / Minus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 137061 gacgatttacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 137002 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 |||||||||||||||||||||||||||||| | |||||||| Sbjct: 137001 gaagtaccgcgagtccttcgaggagtacatcacgtccatggt 136960 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 |||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| Sbjct: 134186 ggtcttaccttcattaagagagaaacatgatgagtttatgctgagagagctagtaa 134131 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 315 tacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 144504 tacaacatgtgcacgcagaagccgccgaacgactactcgcaggtgctctacga 144556
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 192 bits (97), Expect = 7e-46 Identities = 151/169 (89%) Strand = Plus / Minus Query: 140 ccccgatccgacggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatct 199 ||||||| || |||| ||| |||| |||||| |||| |||||||||||||| ||||||| Sbjct: 74935 ccccgattcggcggcggcgccggccgcgatggcgacccacgagcggaagacgatcgatct 74876 Query: 200 ggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcctcgaggg 259 |||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 74875 ggagcaggggtgggagttcatgcagaagggcatcaccaagctgaagaacatcctcgaggg 74816 Query: 260 caagccggagccgcagttcagctccgaggactacatgatgctctacacg 308 ||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 74815 gaagcccgaaccccagttcagctccgaggactacatgatgctctacacg 74767 Score = 163 bits (82), Expect = 6e-37 Identities = 97/102 (95%) Strand = Plus / Minus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 74670 gacgatttacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 74611 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 |||||||||||||||||||||||||||||| | |||||||| Sbjct: 74610 gaagtaccgcgagtccttcgaggagtacatcacgtccatggt 74569 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 |||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| Sbjct: 71795 ggtcttaccttcattaagagagaaacatgatgagtttatgctgagagagctagtaa 71740 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 315 tacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 82114 tacaacatgtgcacgcagaagccgccgaacgactactcgcaggtgctctacga 82166
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 192 bits (97), Expect = 7e-46 Identities = 151/169 (89%) Strand = Plus / Minus Query: 140 ccccgatccgacggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatct 199 ||||||| || |||| ||| |||| |||||| |||| |||||||||||||| ||||||| Sbjct: 15121274 ccccgattcggcggcggcgccggccgcgatggcgacccacgagcggaagacgatcgatct 15121215 Query: 200 ggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcctcgaggg 259 |||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 15121214 ggagcaggggtgggagttcatgcagaagggcatcaccaagctgaagaacatcctcgaggg 15121155 Query: 260 caagccggagccgcagttcagctccgaggactacatgatgctctacacg 308 ||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 15121154 gaagcccgaaccccagttcagctccgaggactacatgatgctctacacg 15121106 Score = 163 bits (82), Expect = 6e-37 Identities = 97/102 (95%) Strand = Plus / Minus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 15121009 gacgatttacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 15120950 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 |||||||||||||||||||||||||||||| | |||||||| Sbjct: 15120949 gaagtaccgcgagtccttcgaggagtacatcacgtccatggt 15120908 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 |||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| Sbjct: 15118134 ggtcttaccttcattaagagagaaacatgatgagtttatgctgagagagctagtaa 15118079 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 315 tacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 15128452 tacaacatgtgcacgcagaagccgccgaacgactactcgcaggtgctctacga 15128504 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 147 ccgacggccgcggcggcggcgatgacgacg 176 |||||||| ||||||||||||| ||||||| Sbjct: 35020334 ccgacggcggcggcggcggcgacgacgacg 35020363 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 147 ccgacggccgcggcggcggcgatgacgacgcacg 180 |||||||| |||||||||||| || ||||||||| Sbjct: 13658090 ccgacggcggcggcggcggcggtggcgacgcacg 13658057 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||| ||||| Sbjct: 31693923 gacggccgcggcggcggcaatggcgacg 31693950 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 30129285 cggccgcggcggcggcgatg 30129266 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 19985262 cgacggccgcggcggcggcg 19985243 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 5542726 cgacggccgcggcggcggcg 5542745
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 192 bits (97), Expect = 7e-46 Identities = 151/169 (89%) Strand = Plus / Minus Query: 140 ccccgatccgacggccgcggcggcggcgatgacgacgcacgagcggaagaccgtcgatct 199 ||||||| || |||| ||| |||| |||||| |||| |||||||||||||| ||||||| Sbjct: 93240 ccccgattcggcggcggcgccggccgcgatggcgacccacgagcggaagacgatcgatct 93181 Query: 200 ggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcctcgaggg 259 |||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 93180 ggagcaggggtgggagttcatgcagaagggcatcaccaagctgaagaacatcctcgaggg 93121 Query: 260 caagccggagccgcagttcagctccgaggactacatgatgctctacacg 308 ||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 93120 gaagcccgaaccccagttcagctccgaggactacatgatgctctacacg 93072 Score = 163 bits (82), Expect = 6e-37 Identities = 97/102 (95%) Strand = Plus / Minus Query: 308 gacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 92975 gacgatttacaacatgtgcacgcagaagccgccgcacgactactcgcagcagctctacga 92916 Query: 368 caagtaccgcgagtccttcgaggagtacatctcctccatggt 409 |||||||||||||||||||||||||||||| | |||||||| Sbjct: 92915 gaagtaccgcgagtccttcgaggagtacatcacgtccatggt 92874 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgttgagggagctagtaa 462 |||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||| Sbjct: 90100 ggtcttaccttcattaagagagaaacatgatgagtttatgctgagagagctagtaa 90045 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 315 tacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacga 367 ||||||||||||||||||||||| ||| |||||||||||||| ||||||||| Sbjct: 100418 tacaacatgtgcacgcagaagccgccgaacgactactcgcaggtgctctacga 100470
>ref|NM_193824.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2241 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 300 ctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcag 359 |||||||||||| | ||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 136 ctctacacgacggtttacaacatgtgcacgcagaagccgccgaacgactactcgcaggtg 195 Query: 360 ctctacga 367 |||||||| Sbjct: 196 ctctacga 203
>dbj|AK073477.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045D14, full insert sequence Length = 2634 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 300 ctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcgcagcag 359 |||||||||||| | ||||||||||||||||||||||| ||| |||||||||||||| | Sbjct: 244 ctctacacgacggtttacaacatgtgcacgcagaagccgccgaacgactactcgcaggtg 303 Query: 360 ctctacga 367 |||||||| Sbjct: 304 ctctacga 311
>emb|AJ344534.1|NTA344534 Nicotiana tabacum mRNA for cullin 1B (cul1B gene) Length = 2758 Score = 79.8 bits (40), Expect = 7e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 291 tacatgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactac 350 ||||||||||||||||| || ||||| |||||||| ||||||||||||||||| || ||| Sbjct: 355 tacatgatgctctacacaactatatataacatgtgtacgcagaagcccccgcatgattac 414 Query: 351 tcgcagcagctctacgacaagtac 374 || || ||||| || || |||||| Sbjct: 415 tcacaacagctgtatgagaagtac 438 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 420 ttaagagagaagcatgacgagtttatgttgagggag 455 |||||||||| |||||| |||||||||||||||||| Sbjct: 484 ttaagagagaggcatgatgagtttatgttgagggag 519
>gb|BT013673.1| Lycopersicon esculentum clone 132492F, mRNA sequence Length = 2887 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 193 tcgatctggaggagggctgggccttcatgcagaagggcatcaccaagctcaagaacatcc 252 |||||||||| | || |||| ||||||||| | |||||| || ||||| |||||||| | Sbjct: 201 tcgatctggaacatggatgggacttcatgcaaaggggcattacaaagctgaagaacattc 260 Query: 253 tcgagggcaagccggagccgcagttcagctccgaggactacatgatgctctacacgacga 312 | || || ||| ||||| || |||||||| |||||||| |||||||| || ||||| | Sbjct: 261 tagaagggctgcctgagcctcaattcagctcagaggactatatgatgctatatacgacaa 320 Query: 313 tatacaacatgtgcacgcagaagccccc 340 | ||||||||||| || || |||||||| Sbjct: 321 tttacaacatgtgtactcaaaagccccc 348 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 414 ccttcattaagagagaagcatgacgagtttatgttg 449 ||||| || ||||| || |||||||||||||||||| Sbjct: 422 ccttctttgagagaaaaacatgacgagtttatgttg 457
>emb|AJ344536.1|NTA344536 Nicotiana tabacum partial mRNA for cullin 1D (cul1D gene) Length = 775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 291 tacatgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactac 350 ||||||||||| ||||| || ||||| || |||||||| |||||||||||||| || ||| Sbjct: 224 tacatgatgctttacacaactatatataatatgtgcacacagaagcccccgcatgattac 283 Query: 351 tcgcagcagctctacgacaagtac 374 || |||||||| || || |||||| Sbjct: 284 tcacagcagctgtatgagaagtac 307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 420 ttaagagagaagcatgacgagtttatgttgagggag 455 |||||||||| |||||| |||||||||||||||||| Sbjct: 353 ttaagagagaggcatgatgagtttatgttgagggag 388
>ref|NM_116491.2| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.1 mRNA, complete cds Length = 2747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 294 atgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcg 353 |||||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct: 387 atgatgctttatacgactatctacaacatgtgcacccagaaacctcctcatgattactca 446 Query: 354 cagcagctctacgacaagta 373 |||||||| || |||||||| Sbjct: 447 cagcagctttatgacaagta 466 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 519 gagaagcatgatgagtttatgctgcgggagcta 551
>ref|NM_001036498.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.2 mRNA, complete cds Length = 2655 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 294 atgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcg 353 |||||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct: 295 atgatgctttatacgactatctacaacatgtgcacccagaaacctcctcatgattactca 354 Query: 354 cagcagctctacgacaagta 373 |||||||| || |||||||| Sbjct: 355 cagcagctttatgacaagta 374 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 427 gagaagcatgatgagtttatgctgcgggagcta 459
>ref|NM_001036499.1| Arabidopsis thaliana ATCUL1 (CULLIN 1) AT4G02570 (ATCUL1) transcript variant AT4G02570.3 mRNA, complete cds Length = 2653 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 294 atgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcg 353 |||||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct: 293 atgatgctttatacgactatctacaacatgtgcacccagaaacctcctcatgattactca 352 Query: 354 cagcagctctacgacaagta 373 |||||||| || |||||||| Sbjct: 353 cagcagctttatgacaagta 372 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 425 gagaagcatgatgagtttatgctgcgggagcta 457
>gb|AY133878.1| Arabidopsis thaliana clone U09998 putative cullin 1 protein (AT4g02570) mRNA, complete cds Length = 2248 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 294 atgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcg 353 |||||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct: 118 atgatgctttatacgactatctacaacatgtgcacccagaaacctcctcatgattactca 177 Query: 354 cagcagctctacgacaagta 373 |||||||| || |||||||| Sbjct: 178 cagcagctttatgacaagta 197 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 250 gagaagcatgatgagtttatgctgcgggagcta 282
>gb|AY046030.1| Arabidopsis thaliana putative cullin 1 protein (At4g02570) mRNA, complete cds Length = 2748 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 294 atgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcg 353 |||||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct: 374 atgatgctttatacgactatctacaacatgtgcacccagaaacctcctcatgattactca 433 Query: 354 cagcagctctacgacaagta 373 |||||||| || |||||||| Sbjct: 434 cagcagctttatgacaagta 453 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 506 gagaagcatgatgagtttatgctgcgggagcta 538
>emb|AJ318017.1|ATH318017 Arabidopsis thaliana mRNA for cullin 1 (cul1 gene) Length = 2456 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 294 atgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactactcg 353 |||||||| || ||||| || |||||||||||||| ||||| || || || || ||||| Sbjct: 152 atgatgctttatacgactatctacaacatgtgcacccagaaacctcctcatgattactca 211 Query: 354 cagcagctctacgacaagta 373 |||||||| || |||||||| Sbjct: 212 cagcagctttatgacaagta 231 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 284 gagaagcatgatgagtttatgctgcgggagcta 316
>emb|AJ344533.1|NTA344533 Nicotiana tabacum mRNA for cullin 1A (cul1A gene) Length = 2693 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 423 agagagaagcatgacgagtttatgttgagggagctagtaa 462 |||||||||||||| ||||||||| |||||||||| |||| Sbjct: 394 agagagaagcatgatgagtttatgctgagggagcttgtaa 433 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 291 tacatgatgctctacacgacgatatacaacatgtgcacgcagaagcccccgcacgactac 350 ||||||||||||||||| || || || |||||||| || |||||||| || || || ||| Sbjct: 262 tacatgatgctctacaccactatctataacatgtgtacacagaagccgcctcatgattac 321 Query: 351 tcgcagcagct 361 || |||||||| Sbjct: 322 tctcagcagct 332
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacgc 177 |||||| |||||||||||||||||||||| Sbjct: 44636 gacggcggcggcggcggcgatgacgacgc 44664
>gb|AC002330.1| Arabidopsis thaliana BAC T10P11 from chromosome IV, near 15 cM, complete sequence Length = 113566 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 315 tacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacgacaagta 373 |||||||||||||| ||||| || || || || ||||| |||||||| || |||||||| Sbjct: 81555 tacaacatgtgcacccagaaacctcctcatgattactcacagcagctttatgacaagta 81497 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 81270 gagaagcatgatgagtttatgctgcgggagcta 81238
>gb|AC073140.5| Homo sapiens BAC clone RP11-731B4 from 7, complete sequence Length = 137990 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 18 cgggcaccggaacgccccgaccc 40 ||||||||||||||||||||||| Sbjct: 38462 cgggcaccggaacgccccgaccc 38484
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6 Length = 194892 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 315 tacaacatgtgcacgcagaagcccccgcacgactactcgcagcagctctacgacaagta 373 |||||||||||||| ||||| || || || || ||||| |||||||| || |||||||| Sbjct: 165190 tacaacatgtgcacccagaaacctcctcatgattactcacagcagctttatgacaagta 165248 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 426 gagaagcatgacgagtttatgttgagggagcta 458 ||||||||||| ||||||||| || |||||||| Sbjct: 165475 gagaagcatgatgagtttatgctgcgggagcta 165507
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 150 acggccgcggcggcggcgatgacgacg 176 ||||||||||||||| ||||||||||| Sbjct: 132347 acggccgcggcggcgacgatgacgacg 132321
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tacaacatgtgcacgcagaagcc 337 ||||||||||||||||||||||| Sbjct: 7461649 tacaacatgtgcacgcagaagcc 7461627
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tacaacatgtgcacgcagaagcc 337 ||||||||||||||||||||||| Sbjct: 7461528 tacaacatgtgcacgcagaagcc 7461506
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 tacaacatgtgcacgcagaagcc 337 ||||||||||||||||||||||| Sbjct: 51325 tacaacatgtgcacgcagaagcc 51303
>gb|AC146552.16| Medicago truncatula clone mth2-9d1, complete sequence Length = 113088 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Minus Query: 407 ggtcttaccttcattaagagagaagcatgacgagtttatgtt 448 |||||||||||| || ||||| || ||||| ||||||||||| Sbjct: 83684 ggtcttaccttctttgagagaaaaacatgatgagtttatgtt 83643
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||||||| Sbjct: 3197374 cggccgcggcggcggcgacgacgacg 3197399 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcgatgacgacg 176 ||||||| ||||||||||||| ||||||| Sbjct: 1931982 cgacggcggcggcggcggcgacgacgacg 1932010
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 147 ccgacggccgcggcggcggcgatgacgacgcacg 180 |||||||| |||||||||||| || ||||||||| Sbjct: 212050 ccgacggcggcggcggcggcggtggcgacgcacg 212017
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 147 ccgacggccgcggcggcggcgatgacgacg 176 |||||||| ||||||||||||| ||||||| Sbjct: 27484 ccgacggcggcggcggcggcgacgacgacg 27513
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 147 ccgacggccgcggcggcggcgatgacgacg 176 |||||||| ||||||||||||| ||||||| Sbjct: 64562 ccgacggcggcggcggcggcgacgacgacg 64591
>gb|AY691905.1| Uncultured bacterium clone HZ20 unknown sequence Length = 3255 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 tccgacggccgcggcggcggcg 167 |||||||||||||||||||||| Sbjct: 1177 tccgacggccgcggcggcggcg 1198
>dbj|AP003336.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151H08 Length = 123001 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 147 ccgacggccgcggcggcggcgatgacgacgcacg 180 |||||||| |||||||||||| || ||||||||| Sbjct: 63328 ccgacggcggcggcggcggcggtggcgacgcacg 63295
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||||||| Sbjct: 125528 cggccgcggcggcggcgacgacgacg 125553
>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1103G11 Length = 182931 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||||||| Sbjct: 69561 cggccgcggcggcggcgacgacgacg 69586
>gb|AE005113.1| Halobacterium sp. NRC-1 section 144 of 170 of the complete genome Length = 11086 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgc 177 |||||||||||||||||||||| Sbjct: 6339 gcggcggcggcgatgacgacgc 6360
>dbj|AK119177.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-G06, full insert sequence Length = 1997 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||||||| Sbjct: 203 cggccgcggcggcggcgacgacgacg 228
>dbj|AK065389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B10, full insert sequence Length = 2052 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||||||| Sbjct: 195 cggccgcggcggcggcgacgacgacg 220
>gb|AY103771.1| Zea mays PCO152633 mRNA sequence Length = 740 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacg 176 |||| ||||||||||||||||||||| Sbjct: 52 cggcagcggcggcggcgatgacgacg 77
>gb|AC102056.17| Mus musculus chromosome 5, clone RP23-190H2, complete sequence Length = 184495 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 45 tcccctctctcctcgtcctcccattttcctttcc 78 ||||||| ||||| ||||||||||||||||||| Sbjct: 98700 tcccctccctccttctcctcccattttcctttcc 98667
>gb|AC119235.13| Mus musculus chromosome 1, clone RP24-212E3, complete sequence Length = 181695 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 41 gctttcccctctctcctcgtcctcc 65 |||||||||||||||||| |||||| Sbjct: 120233 gctttcccctctctcctcttcctcc 120257
>ref|XM_483747.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1176 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgac 175 |||||||||||||||||||| |||| Sbjct: 331 cggccgcggcggcggcgatgccgac 307
>ref|NM_187466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1560 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 191 gcggcggcggcgatgacgacg 211
>ref|XM_464052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2250 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcgatgacgacg 176 ||||||| ||||||||||||| ||||||| Sbjct: 1233 cgacggcggcggcggcggcgacgacgacg 1205
>ref|NM_186390.2| Oryza sativa (japonica cultivar-group), mRNA Length = 667 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcga 168 ||||||||||||||||||||| Sbjct: 91 cgacggccgcggcggcggcga 71
>gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, complete sequence Length = 247962 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 41 gctttcccctctctcctcgtcctcc 65 |||||||||||||||||| |||||| Sbjct: 237580 gctttcccctctctcctcttcctcc 237556
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 9195 gcggcggcggcgatgacgacg 9175
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 8779873 gcggcggcggcgatgacgacg 8779893 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 8595722 cggcggcggcggcggcgatgacgac 8595746 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 31234345 cgacggccgcggcggcggcg 31234326 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 24647700 cgacggccgcggcggcggcg 24647681 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||| ||||||||||||| ||||||| Sbjct: 17865915 gacggcggcggcggcggcgacgacgacg 17865942 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacgca 178 |||| ||||||||||||| ||||||||| Sbjct: 3668922 cggcggcggcggcggcgacgacgacgca 3668949
>emb|AL353631.17| Human DNA sequence from clone RP11-5N16 on chromosome 9 Contains the 5' end of the gene for netrin G2 protein (KIAA1857) and three CpG islands, complete sequence Length = 97112 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 gccccgatccgacggccgcggcggcggcg 167 ||||||||| |||||| |||||||||||| Sbjct: 45254 gccccgatctgacggcggcggcggcggcg 45282
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatga 171 ||||||||||||||||||||| Sbjct: 2182884 cggccgcggcggcggcgatga 2182864
>gb|AE005948.1| Caulobacter crescentus CB15 section 274 of 359 of the complete genome Length = 13101 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 9249 gcggcggcggcgatgacgacg 9229
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 23026 gcggcggcggcgatgacgacg 23046
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 76694 cggcggcggcggcggcgatgacgac 76718
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcgatgacgacg 176 ||||||| |||||||||||| |||||||| Sbjct: 1211771 cgacggcggcggcggcggcggtgacgacg 1211743 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 18431304 cggccgcggcggcggcgatg 18431323
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgac 175 |||||||||||||||||||| |||| Sbjct: 27880751 cggccgcggcggcggcgatgccgac 27880727 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacg 180 ||||||||||||| ||||||||||| Sbjct: 10773238 gcggcggcggcgacgacgacgcacg 10773262 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 7772729 gcggcggcggcgatgacgacg 7772749 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 20924202 cgacggccgcggcggcggcg 20924221
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 25183827 gcggcggcggcgatgacgacg 25183807 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcga 168 ||||||||||||||||||||| Sbjct: 3231085 cgacggccgcggcggcggcga 3231065 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 26681095 gccgcggcggcggcgaggacgacg 26681118 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 26095490 gccgcggcggcggcgaagacgacg 26095467 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcggcggcgatgacgacgc 177 |||||||||||||||||||| Sbjct: 2862079 ggcggcggcgatgacgacgc 2862060
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 8777708 gcggcggcggcgatgacgacg 8777728 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 8593557 cggcggcggcggcggcgatgacgac 8593581 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 31324861 cgacggccgcggcggcggcg 31324842 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 24565169 cgacggccgcggcggcggcg 24565150 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||| ||||||||||||| ||||||| Sbjct: 17859456 gacggcggcggcggcggcgacgacgacg 17859483 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgacgca 178 |||| ||||||||||||| ||||||||| Sbjct: 3669033 cggcggcggcggcggcgacgacgacgca 3669060
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cgcggcggcggcgatgacgac 175 ||||||||||||||||||||| Sbjct: 3292149 cgcggcggcggcgatgacgac 3292169 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 5478233 cgacggccgcggcggcggcg 5478214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 4507700 cgacggccgcggcggcggcg 4507719
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcga 168 ||||||||||||||||||||| Sbjct: 146075 cgacggccgcggcggcggcga 146055
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 498 gcggcggcggcgatgacgacg 478
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcgatgacgacg 176 ||||||| ||||||||||||| ||||||| Sbjct: 71543 cgacggcggcggcggcggcgacgacgacg 71571
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgac 175 |||||||||||||||||||| |||| Sbjct: 88829 cggccgcggcggcggcgatgccgac 88805
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 4016 gcggcggcggcgatgacgacg 4036
>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1221_H04 Length = 129387 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 113452 gcggcggcggcgatgacgacg 113472
>dbj|AK119570.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-A09, full insert sequence Length = 1725 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 524 gcggcggcggcgatgacgacg 544
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacg 180 ||||||||||||| ||||||||||| Sbjct: 70370 gcggcggcggcgacgacgacgcacg 70394
>dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A05, full insert sequence Length = 1071 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 84 cggcggcggcggcggcgatgacgac 108
>dbj|AK100789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A18, full insert sequence Length = 1706 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 524 gcggcggcggcgatgacgacg 544
>dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014L15, full insert sequence Length = 1096 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 97 cggcggcggcggcggcgatgacgac 121
>dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F15, full insert sequence Length = 1126 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 127 cggcggcggcggcggcgatgacgac 151
>dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C07, full insert sequence Length = 1134 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatgacgac 175 |||| |||||||||||||||||||| Sbjct: 129 cggcggcggcggcggcgatgacgac 153
>dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F03, full insert sequence Length = 678 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcga 168 ||||||||||||||||||||| Sbjct: 91 cgacggccgcggcggcggcga 71
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcga 168 ||||||||||||||||||||| Sbjct: 40778 cgacggccgcggcggcggcga 40758
>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_H02 Length = 124043 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 gcggcggcggcgatgacgacg 176 ||||||||||||||||||||| Sbjct: 104314 gcggcggcggcgatgacgacg 104294
>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 catggtcttaccttcattaag 424 ||||||||||||||||||||| Sbjct: 166961 catggtcttaccttcattaag 166941
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 ccgacggccgcggcggcggcgatga 171 ||||||||||||||||| ||||||| Sbjct: 2743397 ccgacggccgcggcggccgcgatga 2743373 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 1823151 cgacggccgcggcggcggcg 1823132
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07, complete sequence Length = 167895 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcgatgacgacg 176 ||||||| |||||||||||| |||||||| Sbjct: 154153 cgacggcggcggcggcggcggtgacgacg 154125
>emb|AL160451.2|HS49E3 Homo sapiens chromosome 21 PAC RPCIP704E349Q2, complete sequence Length = 105570 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 catggtcttaccttcattaag 424 ||||||||||||||||||||| Sbjct: 66211 catggtcttaccttcattaag 66191
>dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:R73I15, q-centromere region, complete sequence Length = 134926 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 404 catggtcttaccttcattaag 424 ||||||||||||||||||||| Sbjct: 112224 catggtcttaccttcattaag 112204
>dbj|AB058760.2| Homo sapiens mRNA for KIAA1857 protein, partial cds Length = 3083 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 gccccgatccgacggccgcggcggcggcg 167 ||||||||| |||||| |||||||||||| Sbjct: 107 gccccgatctgacggcggcggcggcggcg 135
>ref|NM_188297.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 765 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 687 cgacggccgcggcggcggcg 668
>ref|XM_482535.1| Oryza sativa (japonica cultivar-group), mRNA Length = 969 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 323 cgacggccgcggcggcggcg 342
>ref|XM_469869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 796 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 214 cgacggccgcggcggcggcg 195
>gb|AC163020.9| Mus musculus chromosome 7, clone RP23-36L11, complete sequence Length = 215384 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tctggaggagggctgggcct 216 |||||||||||||||||||| Sbjct: 181023 tctggaggagggctgggcct 181004
>ref|XM_450744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 659 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacgagc 183 |||||||||||| |||||||||||||| Sbjct: 108 gcggcggcggcggcgacgacgcacgagc 135
>ref|NM_197638.1| Oryza sativa (japonica cultivar-group) putative receptor kinase (OSJNBa0082M15.20), mRNA Length = 2646 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 83 cgacggccgcggcggcggcg 102
>gb|AC115898.22| Mus musculus chromosome 7, clone RP24-444C13, complete sequence Length = 177754 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 tctggaggagggctgggcct 216 |||||||||||||||||||| Sbjct: 104159 tctggaggagggctgggcct 104178
>ref|NM_191277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||| ||||| Sbjct: 976 gacggccgcggcggcggcaatggcgacg 1003
>ref|NM_193301.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 342 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 303 cgacggccgcggcggcggcg 284
>ref|XM_470285.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgacgca 178 |||| ||||||||||||| ||||||||| Sbjct: 232 cggcggcggcggcggcgacgacgacgca 205
>ref|XM_479306.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2466 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 17 gccgcggcggcggcgaggacgacg 40
>ref|NM_193080.1| Oryza sativa (japonica cultivar-group), mRNA Length = 816 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 50 gccgcggcggcggcgaagacgacg 27
>ref|NM_178037.1| Homo sapiens RAB6 interacting protein 2 (RAB6IP2), transcript variant beta, mRNA Length = 7051 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 90 gacggccgcggcggcggcga 109
>ref|NM_015064.2| Homo sapiens RAB6 interacting protein 2 (RAB6IP2), transcript variant alpha, mRNA Length = 6919 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 90 gacggccgcggcggcggcga 109
>ref|XM_472201.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1644 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 76 cggccgcggcggcggcgatg 57
>gb|AC137001.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012L23, complete sequence Length = 121659 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 cggcggcggcgatgacgacg 176 |||||||||||||||||||| Sbjct: 68516 cggcggcggcgatgacgacg 68535
>gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 genomic sequence, complete sequence Length = 141691 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 23886 cgacggccgcggcggcggcg 23867
>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence Length = 184672 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 42 ctttcccctctctcctcgtcctcccattttcc 73 ||||| ||||||||||| |||| ||||||||| Sbjct: 43571 ctttctcctctctcctcctccttccattttcc 43602
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ggccgcggcggcggcgatga 171 |||||||||||||||||||| Sbjct: 2418588 ggccgcggcggcggcgatga 2418569
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||| ||||||||||||| ||||||| Sbjct: 26200 gacggcggcggcggcggcgacgacgacg 26173
>ref|XM_960422.1| Neurospora crassa OR74A hypothetical protein (NCU01884.1) partial mRNA Length = 3162 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcgatga 171 ||||||| |||||||||||||||| Sbjct: 1206 cgacggcggcggcggcggcgatga 1229
>gb|AC124998.10| Mus musculus chromosome 10, clone RP24-350B12, complete sequence Length = 185801 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 79903 cgacggccgcggcggcggcg 79884
>ref|XM_329073.1| Neurospora crassa OR74A hypothetical protein (NCU01884.1) partial mRNA Length = 3162 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcgatga 171 ||||||| |||||||||||||||| Sbjct: 1206 cgacggcggcggcggcggcgatga 1229
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gatccgacggccgcggcggcggcg 167 |||||||| ||||||||||||||| Sbjct: 9910 gatccgacagccgcggcggcggcg 9887
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcggcggcgatgacgacgc 177 |||||||||||||||||||| Sbjct: 65176 ggcggcggcgatgacgacgc 65157
>gb|AY553636.1| Cynodon dactylon putative ABA-induced protein mRNA, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 tcaagaacatcctcgagggcaagc 264 |||||||||||||| ||||||||| Sbjct: 466 tcaagaacatcctcaagggcaagc 489
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cctcccattttcctttccca 80 |||||||||||||||||||| Sbjct: 139091 cctcccattttcctttccca 139072
>ref|XM_541390.2| PREDICTED: Canis familiaris similar to Zinc finger protein 62 homolog (Zfp-62) (ZT3) (LOC484275), mRNA Length = 3741 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ggctgggccttcatgcagaa 226 |||||||||||||||||||| Sbjct: 1732 ggctgggccttcatgcagaa 1751
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acggccgcggcggcggcgat 169 |||||||||||||||||||| Sbjct: 2583336 acggccgcggcggcggcgat 2583317
>emb|BX842681.1| Neurospora crassa DNA linkage group I BAC clone B13N4 Length = 78124 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcgatga 171 ||||||| |||||||||||||||| Sbjct: 73868 cgacggcggcggcggcggcgatga 73891
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 gatccgacggccgcggcggcggcg 167 |||||||| ||||||||||||||| Sbjct: 1369194 gatccgacagccgcggcggcggcg 1369171
>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01, complete sequence Length = 148353 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 12659 cggccgcggcggcggcgatg 12678
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 acggccgcggcggcggcgat 169 |||||||||||||||||||| Sbjct: 296011 acggccgcggcggcggcgat 295992
>emb|AJ457054.1|TNI457054 Tetraodon nigroviridis repetitive DNA, clone C0AA029L14 Length = 115773 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 cggcggcggcgatgacgacg 176 |||||||||||||||||||| Sbjct: 109541 cggcggcggcgatgacgacg 109522
>dbj|AK091577.1| Homo sapiens cDNA FLJ34258 fis, clone FEBRA1000008, highly similar to Homo sapiens ELKS mRNA Length = 2716 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 65 gacggccgcggcggcggcga 84
>emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OSJNBa0025B02 of library OSJNBa from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136470 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 79746 cgacggccgcggcggcggcg 79727
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ccgcggcggcggcgatgacg 173 |||||||||||||||||||| Sbjct: 1046097 ccgcggcggcggcgatgacg 1046116
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatgacgacgca 178 |||| ||||||||||||| ||||||||| Sbjct: 112455 cggcggcggcggcggcgacgacgacgca 112428
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 41586 cgacggccgcggcggcggcg 41567
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 110957 cgacggccgcggcggcggcg 110976
>gb|AC027238.5| Homo sapiens chromosome 8, clone RP11-377F20, complete sequence Length = 193250 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 cccgctttcccctctctcct 57 |||||||||||||||||||| Sbjct: 116401 cccgctttcccctctctcct 116382
>gb|AF231799.1|AF231799 Pinus taeda clone G18a16 microsatellite sequence Length = 467 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgcggcggcggcgatgacgacg 176 ||||||||||||||| |||||||| Sbjct: 283 gccgcggcggcggcggtgacgacg 306
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cgcggcggcggcgatgacga 174 |||||||||||||||||||| Sbjct: 1737196 cgcggcggcggcgatgacga 1737215
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 144 gatccgacggccgcggcggcggcg 167 |||||||| ||||||||||||||| Sbjct: 1264151 gatccgacagccgcggcggcggcg 1264174
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||| |||| |||||||||||||||| Sbjct: 27344356 gacggcggcggtggcggcgatgacgacg 27344329 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcggcggcgatgacgacgc 177 |||||||||||||||||||| Sbjct: 1847346 ggcggcggcgatgacgacgc 1847327
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 20953434 cgacggccgcggcggcggcg 20953415
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacgagc 183 |||||||||||| |||||||||||||| Sbjct: 12547755 gcggcggcggcggcgacgacgcacgagc 12547782 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||| |||| |||||||||||||||| Sbjct: 6530491 gacggcggcggtggcggcgatgacgacg 6530518
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cggcggcggcgatgacgacgcacg 180 ||||||||||||||||| |||||| Sbjct: 14462610 cggcggcggcgatgacggcgcacg 14462633 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 3157671 cgacggccgcggcggcggcg 3157652
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||| ||||| Sbjct: 107655 gacggccgcggcggcggcaatggcgacg 107682
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 88171 cgacggccgcggcggcggcg 88152
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 34107 cggccgcggcggcggcgatg 34088
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 125275 cggccgcggcggcggcgatg 125256
>gb|AC004803.11| Homo sapiens 12 BAC RP11-359B12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154369 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 112167 gacggccgcggcggcggcga 112186
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 1416367 cgacggccgcggcggcggcg 1416386
>gb|AC125499.3| Equus caballus clone CH241-369C8, complete sequence Length = 207304 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ctcccattttcctttcccac 81 |||||||||||||||||||| Sbjct: 149357 ctcccattttcctttcccac 149338
>gb|AF143964.1|AF143964 Pinus taeda microsatellite PtTX2164 sequence Length = 467 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccgcggcggcggcgatgacgacg 176 ||||||||||||||| |||||||| Sbjct: 185 gccgcggcggcggcggtgacgacg 162
>dbj|AP003868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_B08 Length = 131184 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 102503 cgacggccgcggcggcggcg 102522
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 129052 gccgcggcggcggcgaagacgacg 129029
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 139566 cgacggccgcggcggcggcg 139585
>dbj|AP003105.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489A05 Length = 158815 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 8199 cgacggccgcggcggcggcg 8218
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 111856 cgacggccgcggcggcggcg 111837
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cggcggcggcgatgacgacgcacg 180 ||||||||||||||||| |||||| Sbjct: 55784 cggcggcggcgatgacggcgcacg 55807
>dbj|AP005907.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1151D08 Length = 152824 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||| |||| |||||||||||||||| Sbjct: 29161 gacggcggcggtggcggcgatgacgacg 29188
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 27952 gccgcggcggcggcgaggacgacg 27975
>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0050B07 Length = 142134 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcggcggcgatgacgacgc 177 |||||||||||||||||||| Sbjct: 32366 ggcggcggcgatgacgacgc 32347
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacgagc 183 |||||||||||| |||||||||||||| Sbjct: 13693 gcggcggcggcggcgacgacgcacgagc 13720
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacgagc 183 |||||||||||| |||||||||||||| Sbjct: 63082 gcggcggcggcggcgacgacgcacgagc 63109
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 gccgcggcggcggcgatgacgacg 176 |||||||||||||||| ||||||| Sbjct: 98699 gccgcggcggcggcgaggacgacg 98722
>dbj|AK109279.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B03, full insert sequence Length = 659 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 gcggcggcggcgatgacgacgcacgagc 183 |||||||||||| |||||||||||||| Sbjct: 108 gcggcggcggcggcgacgacgcacgagc 135
>dbj|AK103002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G06, full insert sequence Length = 834 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 340 cgacggccgcggcggcggcg 321
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ccgcggcggcggcgatgacg 173 |||||||||||||||||||| Sbjct: 130640 ccgcggcggcggcgatgacg 130659
>dbj|AK066841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087A03, full insert sequence Length = 3059 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 160 cgacggccgcggcggcggcg 179
>dbj|AK058570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E07, full insert sequence Length = 1609 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||| ||||| Sbjct: 1148 gacggccgcggcggcggcaatggcgacg 1175
>gb|AC156270.5| Mus musculus 10 BAC RP24-289H6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163328 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggaggagggctgggccttca 219 |||||||||||||||||||| Sbjct: 43505 ggaggagggctgggccttca 43486
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ccgcggcggcggcgatgacg 173 |||||||||||||||||||| Sbjct: 130640 ccgcggcggcggcgatgacg 130659
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 74513 cgacggccgcggcggcggcg 74494
>dbj|AB053468.1| Homo sapiens mRNA for ELKS beta, complete cds Length = 3868 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 61 gacggccgcggcggcggcga 80
>dbj|AB015617.1| Homo sapiens ELKS mRNA, complete cds Length = 4943 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 78 gacggccgcggcggcggcga 97
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 4161759 cggccgcggcggcggcgatg 4161740
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcgatga 171 ||||||||||||||| |||||||| Sbjct: 1579491 cgacggccgcggcggaggcgatga 1579468
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 20964698 cgacggccgcggcggcggcg 20964679
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ggcggcggcgatgacgacgc 177 |||||||||||||||||||| Sbjct: 1845067 ggcggcggcgatgacgacgc 1845048
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cggccgcggcggcggcgatg 170 |||||||||||||||||||| Sbjct: 133227 cggccgcggcggcggcgatg 133246
>gb|BC059816.1| Mus musculus SEC63-like (S. cerevisiae), mRNA (cDNA clone IMAGE:6413001), containing frame-shift errors Length = 6047 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 68 cgacggccgcggcggcggcg 87
>dbj|AB080190.1| Pisum sativum cul1 mRNA for cullin-like protein1, complete cds Length = 2724 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 414 ccttcattaagagagaagcatgacgagtttatgttg 449 ||||| || |||||||||||||| || ||||||||| Sbjct: 469 ccttctttgagagagaagcatgatgaatttatgttg 504
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ctcccattttcctttcccac 81 |||||||||||||||||||| Sbjct: 439840 ctcccattttcctttcccac 439821
>gb|AY338664.1| Baetisca sp. Eph16 28S ribosomal RNA gene, partial sequence Length = 2086 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 gacggccgcggcggcggcga 168 |||||||||||||||||||| Sbjct: 1701 gacggccgcggcggcggcga 1682
>dbj|AB070951.1| Streptomyces avermitilis peptide-2 biosynthetic gene cluster Length = 32748 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 cgacggccgcggcggcggcg 167 |||||||||||||||||||| Sbjct: 13160 cgacggccgcggcggcggcg 13141
>dbj|AB071807.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF7, partial cds Length = 1674 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 gacggccgcggcggcggcgatgacgacg 176 |||||||||||||||||| ||| ||||| Sbjct: 1015 gacggccgcggcggcggcaatggcgacg 1042 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,700,678 Number of Sequences: 3902068 Number of extensions: 3700678 Number of successful extensions: 111931 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104028 Number of HSP's gapped (non-prelim): 7899 length of query: 464 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 442 effective length of database: 17,147,199,772 effective search space: 7579062299224 effective search space used: 7579062299224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
